RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, human

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-206	ENST00000535936	SLIT1	O75093	1534 aa		14.07	□□□□□ -0.16
PAAF1-206	ENST00000535936	LRRC7	Q96NW7	1537 aa		14.07	□□□□□ -0.16
PAAF1-206	ENST00000535936	TMEM2	Q9UHN6	1383 aa		14.07	□□□□□ -0.16
PAAF1-206	ENST00000535936	FGD6	Q6ZV73	1430 aa		14.07	□□□□□ -0.16
PAAF1-206	ENST00000535936	MED1	Q15648	1581 aa	Predicted RBP	14.06	□□□□□ -0.16
PAAF1-206	ENST00000535936	ATXN8OS	P0DMR3	200 aa		14.06	□□□□□ -0.16
PAAF1-206	ENST00000535936	ARHGAP23	Q9P227	1491 aa		14.06	□□□□□ -0.16
PAAF1-206	ENST00000535936	MROH1	Q8NDA8	1641 aa		14.05	□□□□□ -0.16
PAAF1-206	ENST00000535936	UBR1	Q8IWV7	1749 aa		14.05	□□□□□ -0.16
PAAF1-206	ENST00000535936	LTK	P29376	864 aa		14.05	□□□□□ -0.16
PAAF1-206	ENST00000535936	FAM50A	Q14320	339 aa	Known RBP	14.05	□□□□□ -0.16
PAAF1-206	ENST00000535936	CFAP65	Q6ZU64	1925 aa	Known RBP	14.04	□□□□□ -0.16
PAAF1-206	ENST00000535936	KCNA6	P17658	529 aa		14.04	□□□□□ -0.16
PAAF1-206	ENST00000535936	PPP1R15A	O75807	674 aa	Predicted RBP	14.03	□□□□□ -0.16
PAAF1-206	ENST00000535936	IDI1	Q13907	227 aa		14.03	□□□□□ -0.16
PAAF1-206	ENST00000535936	PROSER2	Q86WR7	435 aa	Predicted RBP	14.03	□□□□□ -0.16
PAAF1-206	ENST00000535936	EFCAB6	Q5THR3	1501 aa		14.03	□□□□□ -0.16
PAAF1-206	ENST00000535936	CROCC2	H7BZ55	1655 aa		14.03	□□□□□ -0.16
PAAF1-206	ENST00000535936	LMTK2	Q8IWU2	1503 aa		14.02	□□□□□ -0.16
PAAF1-206	ENST00000535936	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14	□□□□□ -0.17
PAAF1-206	ENST00000535936	KDM5A	P29375	1690 aa	Known RBP	13.99	□□□□□ -0.17
PAAF1-206	ENST00000535936	RPRD2	Q5VT52	1461 aa	Known RBP	13.99	□□□□□ -0.17
PAAF1-206	ENST00000535936	FAM135B	Q49AJ0	1406 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	ANKRD50	Q9ULJ7	1429 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	MSH6	P52701	1360 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	TMEM94	Q12767	1356 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	PIK3C2B	O00750	1634 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	SLC26A8	Q96RN1	970 aa		13.98	□□□□□ -0.17
PAAF1-206	ENST00000535936	CHGA	P10645	457 aa	Known RBP	13.97	□□□□□ -0.17
PAAF1-206	ENST00000535936	ADGRL2	O95490	1459 aa		13.97	□□□□□ -0.17
PAAF1-206	ENST00000535936	NOS1	P29475	1434 aa		13.97	□□□□□ -0.17
PAAF1-206	ENST00000535936	C14orf37	Q86TY3	774 aa		13.96	□□□□□ -0.17
PAAF1-206	ENST00000535936	NKTR	P30414	1462 aa	Known RBP	13.95	□□□□□ -0.18
PAAF1-206	ENST00000535936	ADGRB3	O60242	1522 aa		13.95	□□□□□ -0.18
PAAF1-206	ENST00000535936	STRCP1	A6NGW2	1772 aa		13.94	□□□□□ -0.18
PAAF1-206	ENST00000535936	PLEKHG1	Q9ULL1	1385 aa		13.93	□□□□□ -0.18
PAAF1-206	ENST00000535936	TBX22	Q9Y458	520 aa		13.92	□□□□□ -0.18
PAAF1-206	ENST00000535936	ALK	Q9UM73	1620 aa		13.92	□□□□□ -0.18
PAAF1-206	ENST00000535936	SLAIN2	Q9P270	581 aa		13.91	□□□□□ -0.18
PAAF1-206	ENST00000535936	RIMS2	Q9UQ26	1411 aa		13.9	□□□□□ -0.18
PAAF1-206	ENST00000535936	NCOA3	Q9Y6Q9	1424 aa		13.9	□□□□□ -0.18
PAAF1-206	ENST00000535936	ATF3	P18847	181 aa		13.89	□□□□□ -0.19
PAAF1-206	ENST00000535936	CADPS2	Q86UW7	1296 aa		13.89	□□□□□ -0.19
PAAF1-206	ENST00000535936	TET3	O43151	1660 aa		13.88	□□□□□ -0.19
PAAF1-206	ENST00000535936	ROCK1	Q13464	1354 aa		13.88	□□□□□ -0.19
PAAF1-206	ENST00000535936	PIK3R4	Q99570	1358 aa		13.88	□□□□□ -0.19
PAAF1-206	ENST00000535936	JCAD	Q9P266	1359 aa		13.87	□□□□□ -0.19
PAAF1-206	ENST00000535936	MEX3C	Q5U5Q3	659 aa	Known RBP	13.86	□□□□□ -0.19
PAAF1-206	ENST00000535936	RBM33	Q96EV2	1170 aa	Known RBP	13.86	□□□□□ -0.19
PAAF1-206	ENST00000535936	NWD1	Q149M9	1564 aa		13.86	□□□□□ -0.19
PAAF1-206	ENST00000535936	NUP155	O75694	1391 aa		13.85	□□□□□ -0.19
PAAF1-206	ENST00000535936	C19orf44	Q9H6X5	657 aa		13.85	□□□□□ -0.19
PAAF1-206	ENST00000535936	ZFYVE9	O95405	1425 aa		13.84	□□□□□ -0.19
PAAF1-206	ENST00000535936	ITGAE	P38570	1179 aa		13.84	□□□□□ -0.19
PAAF1-206	ENST00000535936	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.84	□□□□□ -0.19
PAAF1-206	ENST00000535936	ROBO1	Q9Y6N7	1651 aa		13.84	□□□□□ -0.19
PAAF1-206	ENST00000535936	GCC2	Q8IWJ2	1684 aa		13.83	□□□□□ -0.2
PAAF1-206	ENST00000535936	ZNF326	Q5BKZ1	582 aa	Known RBP	13.83	□□□□□ -0.2
PAAF1-206	ENST00000535936	SPATA31A6	Q5VVP1	1343 aa		13.83	□□□□□ -0.2
PAAF1-206	ENST00000535936	DIP2A	Q14689	1571 aa		13.83	□□□□□ -0.2
PAAF1-206	ENST00000535936	XIRP1	Q702N8	1843 aa	Known RBP	13.83	□□□□□ -0.2
PAAF1-206	ENST00000535936	ZNF772	Q68DY9	489 aa	Predicted RBP	13.82	□□□□□ -0.2
PAAF1-206	ENST00000535936	UNC13B	O14795	1591 aa		13.81	□□□□□ -0.2
PAAF1-206	ENST00000535936	RBM42	Q9BTD8	480 aa	Known RBP	13.81	□□□□□ -0.2
PAAF1-206	ENST00000535936	AMOTL2	Q9Y2J4	779 aa		13.81	□□□□□ -0.2
PAAF1-206	ENST00000535936	TMEM131L	A2VDJ0	1609 aa		13.8	□□□□□ -0.2
PAAF1-206	ENST00000535936	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.8	□□□□□ -0.2
PAAF1-206	ENST00000535936	RGS17	Q9UGC6	210 aa	Predicted RBP	13.8	□□□□□ -0.2
PAAF1-206	ENST00000535936	TRPM2	O94759	1503 aa		13.8	□□□□□ -0.2
PAAF1-206	ENST00000535936	PHLPP1	O60346	1717 aa		13.78	□□□□□ -0.2
PAAF1-206	ENST00000535936	CHD2	O14647	1828 aa	Known RBP	13.78	□□□□□ -0.2
PAAF1-206	ENST00000535936	POTEA	Q6S8J7	498 aa		13.78	□□□□□ -0.2
PAAF1-206	ENST00000535936	IQGAP3	Q86VI3	1631 aa		13.77	□□□□□ -0.21
PAAF1-206	ENST00000535936	DCC	P43146	1447 aa		13.75	□□□□□ -0.21
PAAF1-206	ENST00000535936	ADAMTS13	Q76LX8	1427 aa		13.75	□□□□□ -0.21
PAAF1-206	ENST00000535936		E9PCH4	1651 aa		13.75	□□□□□ -0.21
PAAF1-206	ENST00000535936	LRRC59	Q96AG4	307 aa	Known RBP	13.74	□□□□□ -0.21
PAAF1-206	ENST00000535936	VGF	O15240	615 aa	Predicted RBP	13.73	□□□□□ -0.21
PAAF1-206	ENST00000535936	MYO5B	Q9ULV0	1848 aa		13.73	□□□□□ -0.21
PAAF1-206	ENST00000535936	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	NUTM2E	B1AL46	878 aa	Predicted RBP	13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	RXRB	P28702	533 aa		13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	BRINP3	Q76B58	766 aa		13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	TRIM52	Q96A61	297 aa		13.71	□□□□□ -0.21
PAAF1-206	ENST00000535936	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.7	□□□□□ -0.22
PAAF1-206	ENST00000535936	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.7	□□□□□ -0.22
PAAF1-206	ENST00000535936	COL16A1	Q07092	1604 aa	Predicted RBP	13.69	□□□□□ -0.22
PAAF1-206	ENST00000535936	RPGRIP1L	Q68CZ1	1315 aa		13.68	□□□□□ -0.22
PAAF1-206	ENST00000535936	SETBP1	Q9Y6X0	1596 aa		13.67	□□□□□ -0.22
PAAF1-206	ENST00000535936	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.67	□□□□□ -0.22
PAAF1-206	ENST00000535936	SPHKAP	Q2M3C7	1700 aa		13.67	□□□□□ -0.22
PAAF1-206	ENST00000535936	PTPRU	Q92729	1446 aa		13.65	□□□□□ -0.22
PAAF1-206	ENST00000535936	SETD5	Q9C0A6	1442 aa		13.65	□□□□□ -0.22
PAAF1-206	ENST00000535936	ADGRL3	Q9HAR2	1447 aa		13.65	□□□□□ -0.22
PAAF1-206	ENST00000535936	SHPRH	Q149N8	1683 aa		13.65	□□□□□ -0.22
PAAF1-206	ENST00000535936	ACIN1	Q9UKV3	1341 aa	Known RBP	13.64	□□□□□ -0.23
PAAF1-206	ENST00000535936	NGLY1	Q96IV0	654 aa		13.64	□□□□□ -0.23
PAAF1-206	ENST00000535936	ASXL1	Q8IXJ9	1541 aa		13.64	□□□□□ -0.23
PAAF1-206	ENST00000535936	MST1R	Q04912	1400 aa		13.64	□□□□□ -0.23

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