RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 ABCC1P33527 1531 aa11.69□□□□□ -0.54
KPNB1-202ENST00000535458 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
KPNB1-202ENST00000535458 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
KPNB1-202ENST00000535458 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
KPNB1-202ENST00000535458 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
KPNB1-202ENST00000535458 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
KPNB1-202ENST00000535458 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
KPNB1-202ENST00000535458 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
KPNB1-202ENST00000535458 MADDQ8WXG6 1647 aa11.67□□□□□ -0.54
KPNB1-202ENST00000535458 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
KPNB1-202ENST00000535458 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
KPNB1-202ENST00000535458 PDE4AP27815 886 aa11.65□□□□□ -0.54
KPNB1-202ENST00000535458 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
KPNB1-202ENST00000535458 TRPM2O94759 1503 aa11.65□□□□□ -0.54
KPNB1-202ENST00000535458 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.55
KPNB1-202ENST00000535458 CDCA8Q53HL2 280 aa11.65□□□□□ -0.55
KPNB1-202ENST00000535458 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.55
KPNB1-202ENST00000535458 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
KPNB1-202ENST00000535458 SCAF11Q99590 1463 aaKnown RBP11.64□□□□□ -0.55
KPNB1-202ENST00000535458 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
KPNB1-202ENST00000535458 PTPRTO14522 1441 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 MS4A1P11836 297 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
KPNB1-202ENST00000535458 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 CLTCL1P53675 1640 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 CEP152O94986 1710 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 PLEKHH1Q9ULM0 1364 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 ASXL2Q76L83 1435 aa11.62□□□□□ -0.55
KPNB1-202ENST00000535458 SYNMO15061 1565 aa11.61□□□□□ -0.55
KPNB1-202ENST00000535458 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
KPNB1-202ENST00000535458 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
KPNB1-202ENST00000535458 KANK1Q14678 1352 aa11.6□□□□□ -0.55
KPNB1-202ENST00000535458 DIP2BQ9P265 1576 aa11.6□□□□□ -0.55
KPNB1-202ENST00000535458 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
KPNB1-202ENST00000535458 KIF3BO15066 747 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 BRPF3Q9ULD4 1205 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
KPNB1-202ENST00000535458 TET3O43151 1660 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 ARAP3Q8WWN8 1544 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 ZNF521Q96K83 1311 aa11.59□□□□□ -0.55
KPNB1-202ENST00000535458 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
KPNB1-202ENST00000535458 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
KPNB1-202ENST00000535458 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
KPNB1-202ENST00000535458 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
KPNB1-202ENST00000535458 MYOM1P52179 1685 aa11.57□□□□□ -0.56
KPNB1-202ENST00000535458 ATP7AQ04656 1500 aa11.57□□□□□ -0.56
KPNB1-202ENST00000535458 ARXQ96QS3 562 aa11.57□□□□□ -0.56
KPNB1-202ENST00000535458 FANCAO15360 1455 aa11.56□□□□□ -0.56
KPNB1-202ENST00000535458 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
KPNB1-202ENST00000535458 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
KPNB1-202ENST00000535458 ADGRF5Q8IZF2 1346 aa11.55□□□□□ -0.56
KPNB1-202ENST00000535458 KDM2BQ8NHM5 1336 aa11.55□□□□□ -0.56
KPNB1-202ENST00000535458 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
KPNB1-202ENST00000535458 KDM5AP29375 1690 aaKnown RBP11.55□□□□□ -0.56
KPNB1-202ENST00000535458 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
KPNB1-202ENST00000535458 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
KPNB1-202ENST00000535458 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
KPNB1-202ENST00000535458 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
KPNB1-202ENST00000535458 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
KPNB1-202ENST00000535458 APAF1O14727 1248 aa11.54□□□□□ -0.56
KPNB1-202ENST00000535458 GLI2P10070 1586 aa11.54□□□□□ -0.56
KPNB1-202ENST00000535458 CENPQQ7L2Z9 268 aaPredicted RBP11.54□□□□□ -0.56
KPNB1-202ENST00000535458 PPRC1Q5VV67 1664 aaKnown RBP11.54□□□□□ -0.56
KPNB1-202ENST00000535458 ABCA9Q8IUA7 1624 aa11.54□□□□□ -0.56
KPNB1-202ENST00000535458 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
KPNB1-202ENST00000535458 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
KPNB1-202ENST00000535458 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
KPNB1-202ENST00000535458 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
KPNB1-202ENST00000535458 ADGRL1O94910 1474 aa11.53□□□□□ -0.56
KPNB1-202ENST00000535458 ABCA6Q8N139 1617 aa11.53□□□□□ -0.56
KPNB1-202ENST00000535458 NEURL4Q96JN8 1562 aa11.52□□□□□ -0.56
KPNB1-202ENST00000535458 MYOM2P54296 1465 aa11.52□□□□□ -0.57
KPNB1-202ENST00000535458 MROH1Q8NDA8 1641 aa11.52□□□□□ -0.57
KPNB1-202ENST00000535458 RGS3P49796 1198 aa11.51□□□□□ -0.57
KPNB1-202ENST00000535458 KIF1BO60333 1816 aa11.5□□□□□ -0.57
KPNB1-202ENST00000535458 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
KPNB1-202ENST00000535458 NKTRP30414 1462 aaKnown RBP11.5□□□□□ -0.57
KPNB1-202ENST00000535458 TSPOAP1O95153 1857 aa11.5□□□□□ -0.57
KPNB1-202ENST00000535458 E9PSI1 815 aa11.49□□□□□ -0.57
KPNB1-202ENST00000535458 BCAR3O75815 825 aa11.49□□□□□ -0.57
KPNB1-202ENST00000535458 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
KPNB1-202ENST00000535458 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
KPNB1-202ENST00000535458 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
KPNB1-202ENST00000535458 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
KPNB1-202ENST00000535458 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
KPNB1-202ENST00000535458 IFT172Q9UG01 1749 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
KPNB1-202ENST00000535458 NOS1P29475 1434 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 NRXN1Q9ULB1 1477 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
KPNB1-202ENST00000535458 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms