RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 GIGYF2Q6Y7W6 1299 aaKnown RBP6.2□□□□□ -1.42
ME3-211ENST00000534638 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
ME3-211ENST00000534638 TRAIPQ9BWF2 469 aa6.2□□□□□ -1.42
ME3-211ENST00000534638 CDHR5Q9HBB8 845 aa6.2□□□□□ -1.42
ME3-211ENST00000534638 GNPATO15228 680 aa6.19□□□□□ -1.42
ME3-211ENST00000534638 REPIN1Q9BWE0 567 aaKnown RBP6.19□□□□□ -1.42
ME3-211ENST00000534638 GOPCQ9HD26 462 aa6.19□□□□□ -1.42
ME3-211ENST00000534638 TRIM6-TRIM34B2RNG4 842 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 BHMG1C9JSJ3 638 aaPredicted RBP6.18□□□□□ -1.42
ME3-211ENST00000534638 RETREG2Q8NC44 543 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 CERKQ8TCT0 537 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 KIAA1468Q9P260 1216 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 RABGEF1Q9UJ41 708 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 MTMR7Q9Y216 660 aa6.18□□□□□ -1.42
ME3-211ENST00000534638 ZNF428Q96B54 188 aa6.17□□□□□ -1.42
ME3-211ENST00000534638 NBPF3Q9H094 633 aa6.17□□□□□ -1.42
ME3-211ENST00000534638 PRSS12P56730 875 aa6.16□□□□□ -1.42
ME3-211ENST00000534638 FOXD4L5Q5VV16 416 aaPredicted RBP6.16□□□□□ -1.42
ME3-211ENST00000534638 MRPL50Q8N5N7 158 aaKnown RBP6.16□□□□□ -1.42
ME3-211ENST00000534638 FOXD4L4Q8WXT5 416 aaPredicted RBP6.16□□□□□ -1.42
ME3-211ENST00000534638 CDCA7LQ96GN5 454 aa6.16□□□□□ -1.42
ME3-211ENST00000534638 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
ME3-211ENST00000534638 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
ME3-211ENST00000534638 LOC105371045A0A1W2PR82 267 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 GOLGA8CPA6NN73 597 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 TMCO4Q5TGY1 634 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 PACS2Q86VP3 889 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 FNBP4Q8N3X1 1017 aaPredicted RBP6.15□□□□□ -1.42
ME3-211ENST00000534638 RGS22Q8NE09 1264 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 KCTD12Q96CX2 325 aaKnown RBP6.15□□□□□ -1.42
ME3-211ENST00000534638 GZF1Q9H116 711 aaPredicted RBP6.15□□□□□ -1.42
ME3-211ENST00000534638 TSKSQ9UJT2 592 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 SERPINA10Q9UK55 444 aa6.15□□□□□ -1.42
ME3-211ENST00000534638 FCHSD2O94868 740 aa6.14□□□□□ -1.43
ME3-211ENST00000534638 MFAP1P55081 439 aaKnown RBP6.14□□□□□ -1.43
ME3-211ENST00000534638 IRF5Q13568 498 aa6.14□□□□□ -1.43
ME3-211ENST00000534638 HIC1Q14526 733 aa6.14□□□□□ -1.43
ME3-211ENST00000534638 SH3D19Q5HYK7 790 aa6.14□□□□□ -1.43
ME3-211ENST00000534638 FAM198AQ9UFP1 575 aa6.14□□□□□ -1.43
ME3-211ENST00000534638 SEPT9Q9UHD8 586 aaPredicted RBP6.14□□□□□ -1.43
ME3-211ENST00000534638 LAPTM4BQ86VI4 370 aa6.13□□□□□ -1.43
ME3-211ENST00000534638 PROCA1Q8NCQ7 364 aaPredicted RBP6.13□□□□□ -1.43
ME3-211ENST00000534638 IGSF3O75054 1194 aa6.12□□□□□ -1.43
ME3-211ENST00000534638 RBM25P49756 843 aaKnown RBP6.12□□□□□ -1.43
ME3-211ENST00000534638 PTGDRQ13258 359 aa6.12□□□□□ -1.43
ME3-211ENST00000534638 PADI6Q6TGC4 694 aa6.12□□□□□ -1.43
ME3-211ENST00000534638 WNT2BQ93097 391 aa6.12□□□□□ -1.43
ME3-211ENST00000534638 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
ME3-211ENST00000534638 SMAPO00193 183 aa6.11□□□□□ -1.43
ME3-211ENST00000534638 TTC13Q8NBP0 860 aa6.11□□□□□ -1.43
ME3-211ENST00000534638 PNMA3Q9UL41 463 aa6.11□□□□□ -1.43
ME3-211ENST00000534638 COG6Q9Y2V7 657 aa6.11□□□□□ -1.43
ME3-211ENST00000534638 NBPF26B4DH59 902 aa6.1□□□□□ -1.43
ME3-211ENST00000534638 C3orf80F5H4A9 247 aa6.1□□□□□ -1.43
ME3-211ENST00000534638 FAM98CQ17RN3 349 aaKnown RBP6.1□□□□□ -1.43
ME3-211ENST00000534638 TATDN2Q93075 761 aa6.1□□□□□ -1.43
ME3-211ENST00000534638 ZFRQ96KR1 1074 aaKnown RBP6.1□□□□□ -1.43
ME3-211ENST00000534638 POLR3EQ9NVU0 708 aa6.1□□□□□ -1.43
ME3-211ENST00000534638 HCSTQ9UBK5 93 aa6.1□□□□□ -1.43
ME3-211ENST00000534638 PTPN5P54829 565 aa6.09□□□□□ -1.43
ME3-211ENST00000534638 MDM2Q00987 491 aaPredicted RBP6.09□□□□□ -1.43
ME3-211ENST00000534638 THSD4Q6ZMP0 1018 aa6.09□□□□□ -1.43
ME3-211ENST00000534638 NUDT18Q6ZVK8 323 aa6.09□□□□□ -1.43
ME3-211ENST00000534638 ANKK1Q8NFD2 765 aa6.09□□□□□ -1.43
ME3-211ENST00000534638 ZNF330Q9Y3S2 320 aaPredicted RBP6.09□□□□□ -1.43
ME3-211ENST00000534638 SKIV2LQ15477 1246 aaKnown RBP6.08□□□□□ -1.44
ME3-211ENST00000534638 SNRKQ9NRH2 765 aa6.08□□□□□ -1.44
ME3-211ENST00000534638 BCAMP50895 628 aa6.07□□□□□ -1.44
ME3-211ENST00000534638 NLRP7Q8WX94 980 aa6.07□□□□□ -1.44
ME3-211ENST00000534638 SOWAHBA6NEL2 793 aa6.06□□□□□ -1.44
ME3-211ENST00000534638 SSTR3P32745 418 aaPredicted RBP6.06□□□□□ -1.44
ME3-211ENST00000534638 PHOX2BQ99453 314 aa6.06□□□□□ -1.44
ME3-211ENST00000534638 BEGAINQ9BUH8 593 aa6.06□□□□□ -1.44
ME3-211ENST00000534638 TMUB1Q9BVT8 246 aa6.06□□□□□ -1.44
ME3-211ENST00000534638 SPDYE5A6NIY4 337 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 CLCN1P35523 988 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 FBXO31Q5XUX0 539 aaPredicted RBP6.05□□□□□ -1.44
ME3-211ENST00000534638 LRCH3Q96II8 777 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 EYA1Q99502 592 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 GPCPD1Q9NPB8 672 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.05□□□□□ -1.44
ME3-211ENST00000534638 ADGRG1Q9Y653 693 aa6.05□□□□□ -1.44
ME3-211ENST00000534638 HDGFP51858 240 aaKnown RBP6.04□□□□□ -1.44
ME3-211ENST00000534638 SAMD7Q7Z3H4 446 aa6.04□□□□□ -1.44
ME3-211ENST00000534638 RBM46Q8TBY0 533 aaKnown RBP6.04□□□□□ -1.44
ME3-211ENST00000534638 POM121CA8CG34 1229 aa6.03□□□□□ -1.44
ME3-211ENST00000534638 MYSM1Q5VVJ2 828 aa6.03□□□□□ -1.44
ME3-211ENST00000534638 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.03□□□□□ -1.44
ME3-211ENST00000534638 GDPD2Q9HCC8 539 aa6.03□□□□□ -1.44
ME3-211ENST00000534638 HPS5Q9UPZ3 1129 aa6.03□□□□□ -1.44
ME3-211ENST00000534638 RFC5P40937 340 aa6.02□□□□□ -1.45
ME3-211ENST00000534638 CLK2P49760 499 aaKnown RBP6.02□□□□□ -1.45
ME3-211ENST00000534638 WBP1LQ9NX94 342 aa6.02□□□□□ -1.45
ME3-211ENST00000534638 TSR3Q9UJK0 312 aaKnown RBP6.02□□□□□ -1.45
ME3-211ENST00000534638 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
ME3-211ENST00000534638 RCCD1A6NED2 376 aa6.01□□□□□ -1.45
ME3-211ENST00000534638 OATP04181 439 aa6.01□□□□□ -1.45
ME3-211ENST00000534638 DNAJB2P25686 324 aa6.01□□□□□ -1.45
ME3-211ENST00000534638 ABL2P42684 1182 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms