RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 NOS1P29475 1434 aa13.25□□□□□ -0.29
NCAM1-218ENST00000534516 IDI1Q13907 227 aa13.24□□□□□ -0.29
NCAM1-218ENST00000534516 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
NCAM1-218ENST00000534516 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
NCAM1-218ENST00000534516 NAIPQ13075 1403 aa13.23□□□□□ -0.29
NCAM1-218ENST00000534516 NUP155O75694 1391 aa13.23□□□□□ -0.29
NCAM1-218ENST00000534516 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
NCAM1-218ENST00000534516 LTKP29376 864 aa13.22□□□□□ -0.29
NCAM1-218ENST00000534516 IQGAP1P46940 1657 aa13.21□□□□□ -0.29
NCAM1-218ENST00000534516 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
NCAM1-218ENST00000534516 MED14O60244 1454 aa13.2□□□□□ -0.3
NCAM1-218ENST00000534516 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
NCAM1-218ENST00000534516 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
NCAM1-218ENST00000534516 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
NCAM1-218ENST00000534516 SLIT1O75093 1534 aa13.19□□□□□ -0.3
NCAM1-218ENST00000534516 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
NCAM1-218ENST00000534516 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
NCAM1-218ENST00000534516 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
NCAM1-218ENST00000534516 TXNDC2Q86VQ3 553 aa13.18□□□□□ -0.3
NCAM1-218ENST00000534516 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
NCAM1-218ENST00000534516 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
NCAM1-218ENST00000534516 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
NCAM1-218ENST00000534516 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
NCAM1-218ENST00000534516 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
NCAM1-218ENST00000534516 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
NCAM1-218ENST00000534516 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
NCAM1-218ENST00000534516 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
NCAM1-218ENST00000534516 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
NCAM1-218ENST00000534516 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
NCAM1-218ENST00000534516 TRIM52Q96A61 297 aa13.13□□□□□ -0.31
NCAM1-218ENST00000534516 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
NCAM1-218ENST00000534516 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
NCAM1-218ENST00000534516 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
NCAM1-218ENST00000534516 SLC26A8Q96RN1 970 aa13.1□□□□□ -0.31
NCAM1-218ENST00000534516 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
NCAM1-218ENST00000534516 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
NCAM1-218ENST00000534516 CPS1P31327 1500 aa13.09□□□□□ -0.31
NCAM1-218ENST00000534516 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
NCAM1-218ENST00000534516 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
NCAM1-218ENST00000534516 TRPM2O94759 1503 aa13.07□□□□□ -0.32
NCAM1-218ENST00000534516 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
NCAM1-218ENST00000534516 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
NCAM1-218ENST00000534516 KIF1BO60333 1816 aa13.05□□□□□ -0.32
NCAM1-218ENST00000534516 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
NCAM1-218ENST00000534516 BCANQ96GW7 911 aa13.05□□□□□ -0.32
NCAM1-218ENST00000534516 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
NCAM1-218ENST00000534516 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
NCAM1-218ENST00000534516 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
NCAM1-218ENST00000534516 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
NCAM1-218ENST00000534516 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
NCAM1-218ENST00000534516 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
NCAM1-218ENST00000534516 RAB3GAP2Q9H2M9 1393 aa13.02□□□□□ -0.33
NCAM1-218ENST00000534516 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.33
NCAM1-218ENST00000534516 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
NCAM1-218ENST00000534516 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
NCAM1-218ENST00000534516 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
NCAM1-218ENST00000534516 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
NCAM1-218ENST00000534516 KCNA6P17658 529 aa13□□□□□ -0.33
NCAM1-218ENST00000534516 ABCF1Q8NE71 845 aaKnown RBP eCLIP13□□□□□ -0.33
NCAM1-218ENST00000534516 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
NCAM1-218ENST00000534516 POTEHQ6S545 545 aa12.99□□□□□ -0.33
NCAM1-218ENST00000534516 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
NCAM1-218ENST00000534516 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
NCAM1-218ENST00000534516 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
NCAM1-218ENST00000534516 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
NCAM1-218ENST00000534516 PPLO60437 1756 aa12.97□□□□□ -0.33
NCAM1-218ENST00000534516 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
NCAM1-218ENST00000534516 TOM1O60784 492 aa12.96□□□□□ -0.33
NCAM1-218ENST00000534516 DIP2AQ14689 1571 aa12.95□□□□□ -0.34
NCAM1-218ENST00000534516 HSPA1LP34931 641 aa12.95□□□□□ -0.34
NCAM1-218ENST00000534516 METP08581 1390 aa12.94□□□□□ -0.34
NCAM1-218ENST00000534516 NKTRP30414 1462 aaKnown RBP12.94□□□□□ -0.34
NCAM1-218ENST00000534516 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
NCAM1-218ENST00000534516 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
NCAM1-218ENST00000534516 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
NCAM1-218ENST00000534516 SPATA31E1Q6ZUB1 1445 aa12.93□□□□□ -0.34
NCAM1-218ENST00000534516 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
NCAM1-218ENST00000534516 XRN1Q8IZH2 1706 aaKnown RBP12.92□□□□□ -0.34
NCAM1-218ENST00000534516 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
NCAM1-218ENST00000534516 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
NCAM1-218ENST00000534516 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
NCAM1-218ENST00000534516 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
NCAM1-218ENST00000534516 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
NCAM1-218ENST00000534516 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
NCAM1-218ENST00000534516 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
NCAM1-218ENST00000534516 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
NCAM1-218ENST00000534516 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
NCAM1-218ENST00000534516 MSH6P52701 1360 aa12.86□□□□□ -0.35
NCAM1-218ENST00000534516 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
NCAM1-218ENST00000534516 HRCP23327 699 aa12.85□□□□□ -0.35
NCAM1-218ENST00000534516 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
NCAM1-218ENST00000534516 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
NCAM1-218ENST00000534516 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
NCAM1-218ENST00000534516 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
NCAM1-218ENST00000534516 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
NCAM1-218ENST00000534516 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
NCAM1-218ENST00000534516 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
NCAM1-218ENST00000534516 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
NCAM1-218ENST00000534516 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
NCAM1-218ENST00000534516 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms