RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
MS4A6A-220ENST00000533989 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
MS4A6A-220ENST00000533989 SYNMO15061 1565 aa12.28□□□□□ -0.44
MS4A6A-220ENST00000533989 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
MS4A6A-220ENST00000533989 KDM5AP29375 1690 aaKnown RBP12.28□□□□□ -0.44
MS4A6A-220ENST00000533989 NOS1P29475 1434 aa12.28□□□□□ -0.44
MS4A6A-220ENST00000533989 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
MS4A6A-220ENST00000533989 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
MS4A6A-220ENST00000533989 IDI1Q13907 227 aa12.26□□□□□ -0.45
MS4A6A-220ENST00000533989 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
MS4A6A-220ENST00000533989 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
MS4A6A-220ENST00000533989 EFCAB6Q5THR3 1501 aa12.26□□□□□ -0.45
MS4A6A-220ENST00000533989 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
MS4A6A-220ENST00000533989 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
MS4A6A-220ENST00000533989 RPRD2Q5VT52 1461 aaKnown RBP12.25□□□□□ -0.45
MS4A6A-220ENST00000533989 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
MS4A6A-220ENST00000533989 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
MS4A6A-220ENST00000533989 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
MS4A6A-220ENST00000533989 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
MS4A6A-220ENST00000533989 TET3O43151 1660 aa12.22□□□□□ -0.45
MS4A6A-220ENST00000533989 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.45
MS4A6A-220ENST00000533989 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.46
MS4A6A-220ENST00000533989 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
MS4A6A-220ENST00000533989 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
MS4A6A-220ENST00000533989 KCNA6P17658 529 aa12.2□□□□□ -0.46
MS4A6A-220ENST00000533989 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
MS4A6A-220ENST00000533989 ZFYVE9O95405 1425 aa12.18□□□□□ -0.46
MS4A6A-220ENST00000533989 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
MS4A6A-220ENST00000533989 NKTRP30414 1462 aaKnown RBP12.17□□□□□ -0.46
MS4A6A-220ENST00000533989 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
MS4A6A-220ENST00000533989 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
MS4A6A-220ENST00000533989 UNC13BO14795 1591 aa12.16□□□□□ -0.46
MS4A6A-220ENST00000533989 NWD1Q149M9 1564 aa12.16□□□□□ -0.46
MS4A6A-220ENST00000533989 PLEKHG1Q9ULL1 1385 aa12.16□□□□□ -0.46
MS4A6A-220ENST00000533989 HDGFP51858 240 aaKnown RBP12.15□□□□□ -0.46
MS4A6A-220ENST00000533989 SLC26A8Q96RN1 970 aa12.15□□□□□ -0.46
MS4A6A-220ENST00000533989 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
MS4A6A-220ENST00000533989 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
MS4A6A-220ENST00000533989 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
MS4A6A-220ENST00000533989 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
MS4A6A-220ENST00000533989 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.12□□□□□ -0.47
MS4A6A-220ENST00000533989 TBX22Q9Y458 520 aa12.12□□□□□ -0.47
MS4A6A-220ENST00000533989 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
MS4A6A-220ENST00000533989 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
MS4A6A-220ENST00000533989 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
MS4A6A-220ENST00000533989 NUP155O75694 1391 aa12.09□□□□□ -0.47
MS4A6A-220ENST00000533989 MSH6P52701 1360 aa12.09□□□□□ -0.47
MS4A6A-220ENST00000533989 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
MS4A6A-220ENST00000533989 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
MS4A6A-220ENST00000533989 E9PCH4 1651 aa12.08□□□□□ -0.48
MS4A6A-220ENST00000533989 BCANQ96GW7 911 aa12.08□□□□□ -0.48
MS4A6A-220ENST00000533989 ADAMTS13Q76LX8 1427 aa12.08□□□□□ -0.48
MS4A6A-220ENST00000533989 DIP2AQ14689 1571 aa12.08□□□□□ -0.48
MS4A6A-220ENST00000533989 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
MS4A6A-220ENST00000533989 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
MS4A6A-220ENST00000533989 CHD2O14647 1828 aaKnown RBP12.05□□□□□ -0.48
MS4A6A-220ENST00000533989 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
MS4A6A-220ENST00000533989 ROBO1Q9Y6N7 1651 aa12.05□□□□□ -0.48
MS4A6A-220ENST00000533989 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
MS4A6A-220ENST00000533989 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
MS4A6A-220ENST00000533989 C19orf44Q9H6X5 657 aa12.03□□□□□ -0.48
MS4A6A-220ENST00000533989 MYO5BQ9ULV0 1848 aa12.02□□□□□ -0.48
MS4A6A-220ENST00000533989 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
MS4A6A-220ENST00000533989 TRPM2O94759 1503 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 ITGAEP38570 1179 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 POLA2Q14181 598 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 JCADQ9P266 1359 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 DCCP43146 1447 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
MS4A6A-220ENST00000533989 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
MS4A6A-220ENST00000533989 PTPRUQ92729 1446 aa12□□□□□ -0.49
MS4A6A-220ENST00000533989 AMOTL2Q9Y2J4 779 aa11.99□□□□□ -0.49
MS4A6A-220ENST00000533989 NAIPQ13075 1403 aa11.99□□□□□ -0.49
MS4A6A-220ENST00000533989 ATF3P18847 181 aa11.98□□□□□ -0.49
MS4A6A-220ENST00000533989 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 SPHKAPQ2M3C7 1700 aa11.97□□□□□ -0.49
MS4A6A-220ENST00000533989 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
MS4A6A-220ENST00000533989 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
MS4A6A-220ENST00000533989 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
MS4A6A-220ENST00000533989 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.96□□□□□ -0.49
MS4A6A-220ENST00000533989 METP08581 1390 aa11.95□□□□□ -0.5
MS4A6A-220ENST00000533989 PHLPP1O60346 1717 aa11.95□□□□□ -0.5
MS4A6A-220ENST00000533989 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
MS4A6A-220ENST00000533989 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
MS4A6A-220ENST00000533989 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
MS4A6A-220ENST00000533989 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
MS4A6A-220ENST00000533989 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
MS4A6A-220ENST00000533989 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
MS4A6A-220ENST00000533989 MST1RQ04912 1400 aa11.93□□□□□ -0.5
MS4A6A-220ENST00000533989 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
MS4A6A-220ENST00000533989 ADGRL3Q9HAR2 1447 aa11.92□□□□□ -0.5
MS4A6A-220ENST00000533989 LRP6O75581 1613 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms