RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 ABCC3O15438 1527 aa9.97□□□□□ -0.81
RNPC3-209ENST00000533834 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
RNPC3-209ENST00000533834 NEXMIFQ5QGS0 1516 aa9.97□□□□□ -0.81
RNPC3-209ENST00000533834 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.81
RNPC3-209ENST00000533834 ERVK-7P63135 1459 aa9.96□□□□□ -0.81
RNPC3-209ENST00000533834 REREQ9P2R6 1566 aa9.96□□□□□ -0.81
RNPC3-209ENST00000533834 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.82
RNPC3-209ENST00000533834 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.82
RNPC3-209ENST00000533834 ADGRL1O94910 1474 aa9.96□□□□□ -0.82
RNPC3-209ENST00000533834 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
RNPC3-209ENST00000533834 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
RNPC3-209ENST00000533834 TMEM131LA2VDJ0 1609 aa9.94□□□□□ -0.82
RNPC3-209ENST00000533834 ST20-MTHFSA0A0A6YYL1 179 aa9.94□□□□□ -0.82
RNPC3-209ENST00000533834 SCAF11Q99590 1463 aaKnown RBP9.94□□□□□ -0.82
RNPC3-209ENST00000533834 FKBP8Q14318 412 aa9.93□□□□□ -0.82
RNPC3-209ENST00000533834 PIK3C2GO75747 1445 aa9.93□□□□□ -0.82
RNPC3-209ENST00000533834 NOS1P29475 1434 aa9.93□□□□□ -0.82
RNPC3-209ENST00000533834 TSPY4P0CV99 314 aa9.93□□□□□ -0.82
RNPC3-209ENST00000533834 TSPY10P0CW01 314 aa9.93□□□□□ -0.82
RNPC3-209ENST00000533834 ERICH6BQ5W0A0 696 aa9.92□□□□□ -0.82
RNPC3-209ENST00000533834 RIMBP3CA6NJZ7 1639 aa9.91□□□□□ -0.82
RNPC3-209ENST00000533834 RIMBP3BA6NNM3 1639 aa9.91□□□□□ -0.82
RNPC3-209ENST00000533834 RIMBP3Q9UFD9 1639 aa9.91□□□□□ -0.82
RNPC3-209ENST00000533834 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
RNPC3-209ENST00000533834 VIRMAQ69YN4 1812 aaKnown RBP9.91□□□□□ -0.82
RNPC3-209ENST00000533834 NPATQ14207 1427 aa9.91□□□□□ -0.82
RNPC3-209ENST00000533834 SBNO2Q9Y2G9 1366 aa9.9□□□□□ -0.82
RNPC3-209ENST00000533834 NEO1Q92859 1461 aa9.9□□□□□ -0.82
RNPC3-209ENST00000533834 DIP2BQ9P265 1576 aa9.9□□□□□ -0.83
RNPC3-209ENST00000533834 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.83
RNPC3-209ENST00000533834 KIF13AQ9H1H9 1805 aa9.89□□□□□ -0.83
RNPC3-209ENST00000533834 DCAF11Q8TEB1 546 aa9.89□□□□□ -0.83
RNPC3-209ENST00000533834 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
RNPC3-209ENST00000533834 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
RNPC3-209ENST00000533834 TULP4Q9NRJ4 1543 aa9.89□□□□□ -0.83
RNPC3-209ENST00000533834 MYBBP1AQ9BQG0 1328 aaKnown RBP9.89□□□□□ -0.83
RNPC3-209ENST00000533834 HNRNPUQ00839 825 aaKnown RBP eCLIP9.88□□□□□ -0.83
RNPC3-209ENST00000533834 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
RNPC3-209ENST00000533834 ZNF521Q96K83 1311 aa9.88□□□□□ -0.83
RNPC3-209ENST00000533834 EFCAB2Q5VUJ9 269 aa9.88□□□□□ -0.83
RNPC3-209ENST00000533834 CARD11Q9BXL7 1154 aa9.88□□□□□ -0.83
RNPC3-209ENST00000533834 AFAP1Q8N556 730 aa9.87□□□□□ -0.83
RNPC3-209ENST00000533834 ADGRB2O60241 1585 aa9.87□□□□□ -0.83
RNPC3-209ENST00000533834 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
RNPC3-209ENST00000533834 MRS2Q9HD23 443 aa9.85□□□□□ -0.83
RNPC3-209ENST00000533834 RALBP1Q15311 655 aa9.84□□□□□ -0.83
RNPC3-209ENST00000533834 KNDC1Q76NI1 1749 aa9.84□□□□□ -0.83
RNPC3-209ENST00000533834 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
RNPC3-209ENST00000533834 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
RNPC3-209ENST00000533834 NLRP1Q9C000 1473 aa9.83□□□□□ -0.84
RNPC3-209ENST00000533834 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
RNPC3-209ENST00000533834 SPAG9O60271 1321 aaKnown RBP9.83□□□□□ -0.84
RNPC3-209ENST00000533834 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
RNPC3-209ENST00000533834 CD163L1Q9NR16 1453 aa9.82□□□□□ -0.84
RNPC3-209ENST00000533834 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
RNPC3-209ENST00000533834 KIF20BQ96Q89 1820 aa9.82□□□□□ -0.84
RNPC3-209ENST00000533834 PTPRMP28827 1452 aa9.82□□□□□ -0.84
RNPC3-209ENST00000533834 AGLP35573 1532 aa9.81□□□□□ -0.84
RNPC3-209ENST00000533834 SPATA31D1Q6ZQQ2 1576 aa9.81□□□□□ -0.84
RNPC3-209ENST00000533834 COL3A1P02461 1466 aaPredicted RBP9.81□□□□□ -0.84
RNPC3-209ENST00000533834 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
RNPC3-209ENST00000533834 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
RNPC3-209ENST00000533834 CFAP65Q6ZU64 1925 aaKnown RBP9.8□□□□□ -0.84
RNPC3-209ENST00000533834 CD109Q6YHK3 1445 aa9.79□□□□□ -0.84
RNPC3-209ENST00000533834 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
RNPC3-209ENST00000533834 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
RNPC3-209ENST00000533834 ADGRF5Q8IZF2 1346 aa9.79□□□□□ -0.84
RNPC3-209ENST00000533834 BCANQ96GW7 911 aa9.78□□□□□ -0.84
RNPC3-209ENST00000533834 FAM9BQ8IZU0 186 aa9.78□□□□□ -0.84
RNPC3-209ENST00000533834 PPP4R2Q9NY27 417 aa9.78□□□□□ -0.84
RNPC3-209ENST00000533834 NRKQ7Z2Y5 1582 aa9.78□□□□□ -0.84
RNPC3-209ENST00000533834 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
RNPC3-209ENST00000533834 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.84
RNPC3-209ENST00000533834 AKAP12Q02952 1782 aa9.77□□□□□ -0.85
RNPC3-209ENST00000533834 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
RNPC3-209ENST00000533834 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
RNPC3-209ENST00000533834 YEATS2Q9ULM3 1422 aa9.76□□□□□ -0.85
RNPC3-209ENST00000533834 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
RNPC3-209ENST00000533834 PANK3Q9H999 370 aa9.75□□□□□ -0.85
RNPC3-209ENST00000533834 ARHGEF40Q8TER5 1519 aa9.74□□□□□ -0.85
RNPC3-209ENST00000533834 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
RNPC3-209ENST00000533834 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
RNPC3-209ENST00000533834 IRX6P78412 446 aaPredicted RBP9.74□□□□□ -0.85
RNPC3-209ENST00000533834 MED14O60244 1454 aa9.74□□□□□ -0.85
RNPC3-209ENST00000533834 MARF1Q9Y4F3 1742 aaKnown RBP9.74□□□□□ -0.85
RNPC3-209ENST00000533834 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
RNPC3-209ENST00000533834 ZNF326Q5BKZ1 582 aaKnown RBP9.73□□□□□ -0.85
RNPC3-209ENST00000533834 C3P01024 1663 aa9.73□□□□□ -0.85
RNPC3-209ENST00000533834 UBR1Q8IWV7 1749 aa9.72□□□□□ -0.85
RNPC3-209ENST00000533834 RGL3Q3MIN7 710 aa9.72□□□□□ -0.85
RNPC3-209ENST00000533834 RIMS1Q86UR5 1692 aaKnown RBP9.72□□□□□ -0.85
RNPC3-209ENST00000533834 PPP2R1AP30153 589 aa9.72□□□□□ -0.85
RNPC3-209ENST00000533834 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.85
RNPC3-209ENST00000533834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.85
RNPC3-209ENST00000533834 USP54Q70EL1 1684 aa9.71□□□□□ -0.85
RNPC3-209ENST00000533834 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.86
RNPC3-209ENST00000533834 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
RNPC3-209ENST00000533834 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
RNPC3-209ENST00000533834 KANK1Q14678 1352 aa9.7□□□□□ -0.86
RNPC3-209ENST00000533834 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms