RNA–Protein interactions for RNA: ENST00000533734.1

TCN1-204, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-204ENST00000533734 PXYLP1Q8TE99 480 aa10.89□□□□□ -0.67
TCN1-204ENST00000533734 MTRQ99707 1265 aa10.89□□□□□ -0.67
TCN1-204ENST00000533734 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
TCN1-204ENST00000533734 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
TCN1-204ENST00000533734 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
TCN1-204ENST00000533734 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
TCN1-204ENST00000533734 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
TCN1-204ENST00000533734 FECHP22830 423 aa10.84□□□□□ -0.67
TCN1-204ENST00000533734 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
TCN1-204ENST00000533734 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
TCN1-204ENST00000533734 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
TCN1-204ENST00000533734 PCDHB3Q9Y5E6 796 aa10.79□□□□□ -0.68
TCN1-204ENST00000533734 CFHP08603 1231 aa10.78□□□□□ -0.68
TCN1-204ENST00000533734 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
TCN1-204ENST00000533734 SLC10A3P09131 477 aa10.77□□□□□ -0.69
TCN1-204ENST00000533734 COPS2P61201 443 aa10.77□□□□□ -0.69
TCN1-204ENST00000533734 ZPR1O75312 459 aa10.75□□□□□ -0.69
TCN1-204ENST00000533734 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
TCN1-204ENST00000533734 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
TCN1-204ENST00000533734 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
TCN1-204ENST00000533734 RSPH4AQ5TD94 716 aa10.73□□□□□ -0.69
TCN1-204ENST00000533734 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
TCN1-204ENST00000533734 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
TCN1-204ENST00000533734 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
TCN1-204ENST00000533734 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
TCN1-204ENST00000533734 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
TCN1-204ENST00000533734 GGCXP38435 758 aa10.68□□□□□ -0.7
TCN1-204ENST00000533734 SULF1Q8IWU6 871 aa10.68□□□□□ -0.7
TCN1-204ENST00000533734 NLRP7Q8WX94 980 aa10.68□□□□□ -0.7
TCN1-204ENST00000533734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCN1-204ENST00000533734 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
TCN1-204ENST00000533734 MINK1Q8N4C8 1332 aaPredicted RBP10.66□□□□□ -0.7
TCN1-204ENST00000533734 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
TCN1-204ENST00000533734 IRF6O14896 467 aa10.66□□□□□ -0.7
TCN1-204ENST00000533734 TLL1O43897 1013 aa10.66□□□□□ -0.7
TCN1-204ENST00000533734 NR1I2O75469 434 aa10.66□□□□□ -0.7
TCN1-204ENST00000533734 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
TCN1-204ENST00000533734 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
TCN1-204ENST00000533734 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
TCN1-204ENST00000533734 PRKD2Q9BZL6 878 aa10.63□□□□□ -0.71
TCN1-204ENST00000533734 ADH1BP00325 375 aa10.62□□□□□ -0.71
TCN1-204ENST00000533734 GCGRP47871 477 aa10.62□□□□□ -0.71
TCN1-204ENST00000533734 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
TCN1-204ENST00000533734 FUT2Q10981 343 aa10.6□□□□□ -0.71
TCN1-204ENST00000533734 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
TCN1-204ENST00000533734 SCUBE3Q8IX30 993 aa10.6□□□□□ -0.71
TCN1-204ENST00000533734 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
TCN1-204ENST00000533734 MORN1Q5T089 497 aa10.59□□□□□ -0.71
TCN1-204ENST00000533734 CD46P15529 392 aa10.58□□□□□ -0.72
TCN1-204ENST00000533734 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
TCN1-204ENST00000533734 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
TCN1-204ENST00000533734 S1PR4O95977 384 aa10.57□□□□□ -0.72
TCN1-204ENST00000533734 LAPTM4AQ15012 233 aa10.57□□□□□ -0.72
TCN1-204ENST00000533734 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
TCN1-204ENST00000533734 SPSB2Q99619 263 aa10.55□□□□□ -0.72
TCN1-204ENST00000533734 SLC6A16Q9GZN6 736 aa10.55□□□□□ -0.72
TCN1-204ENST00000533734 CLCN1P35523 988 aa10.54□□□□□ -0.72
TCN1-204ENST00000533734 THAP11Q96EK4 314 aa10.54□□□□□ -0.72
TCN1-204ENST00000533734 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
TCN1-204ENST00000533734 SALL2Q9Y467 1007 aaPredicted RBP10.54□□□□□ -0.72
TCN1-204ENST00000533734 ZMYND10O75800 440 aa10.53□□□□□ -0.72
TCN1-204ENST00000533734 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
TCN1-204ENST00000533734 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
TCN1-204ENST00000533734 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
TCN1-204ENST00000533734 SLC27A5Q9Y2P5 690 aa10.52□□□□□ -0.73
TCN1-204ENST00000533734 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
TCN1-204ENST00000533734 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
TCN1-204ENST00000533734 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
TCN1-204ENST00000533734 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
TCN1-204ENST00000533734 PPEF1O14829 653 aaPredicted RBP10.49□□□□□ -0.73
TCN1-204ENST00000533734 KDM4AO75164 1064 aa10.49□□□□□ -0.73
TCN1-204ENST00000533734 SLC19A1P41440 591 aa10.49□□□□□ -0.73
TCN1-204ENST00000533734 USP46P62068 366 aa10.49□□□□□ -0.73
TCN1-204ENST00000533734 GFRA3O60609 400 aa10.48□□□□□ -0.73
TCN1-204ENST00000533734 BRICD5Q6PL45 260 aa10.48□□□□□ -0.73
TCN1-204ENST00000533734 Q3C1V9 767 aa10.47□□□□□ -0.73
TCN1-204ENST00000533734 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
TCN1-204ENST00000533734 Q6ZNB5 142 aa10.47□□□□□ -0.73
TCN1-204ENST00000533734 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
TCN1-204ENST00000533734 AMHR2Q16671 573 aa10.46□□□□□ -0.73
TCN1-204ENST00000533734 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
TCN1-204ENST00000533734 RNF19BQ6ZMZ0 732 aa10.46□□□□□ -0.73
TCN1-204ENST00000533734 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
TCN1-204ENST00000533734 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
TCN1-204ENST00000533734 HOXA2O43364 376 aa10.44□□□□□ -0.74
TCN1-204ENST00000533734 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
TCN1-204ENST00000533734 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
TCN1-204ENST00000533734 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
TCN1-204ENST00000533734 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
TCN1-204ENST00000533734 TRIM67Q6ZTA4 783 aa10.42□□□□□ -0.74
TCN1-204ENST00000533734 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
TCN1-204ENST00000533734 FCF1Q9Y324 198 aaKnown RBP10.42□□□□□ -0.74
TCN1-204ENST00000533734 PRR20EP86478 221 aa10.41□□□□□ -0.74
TCN1-204ENST00000533734 PRR20CP86479 221 aa10.41□□□□□ -0.74
TCN1-204ENST00000533734 PRR20DP86480 221 aa10.41□□□□□ -0.74
TCN1-204ENST00000533734 PRR20BP86481 221 aa10.41□□□□□ -0.74
TCN1-204ENST00000533734 PRR20AP86496 221 aa10.41□□□□□ -0.74
TCN1-204ENST00000533734 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
TCN1-204ENST00000533734 ZNF697Q5TEC3 545 aa10.4□□□□□ -0.74
TCN1-204ENST00000533734 MMP16P51512 607 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms