RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 CLTCQ00610 1675 aaKnown RBP30.19■■■□□ 2.42
AP004608.1-202ENST00000533390 RPGRIP1LQ68CZ1 1315 aa30.19■■■□□ 2.42
AP004608.1-202ENST00000533390 SLC52A1Q9NWF4 448 aa30.18■■■□□ 2.42
AP004608.1-202ENST00000533390 NRXN1Q9ULB1 1477 aa30.18■■■□□ 2.42
AP004608.1-202ENST00000533390 ADGRF5Q8IZF2 1346 aa30.17■■■□□ 2.42
AP004608.1-202ENST00000533390 SCAF11Q99590 1463 aaKnown RBP30.17■■■□□ 2.42
AP004608.1-202ENST00000533390 MLECQ14165 292 aa30.12■■■□□ 2.41
AP004608.1-202ENST00000533390 IDI1Q13907 227 aa30.11■■■□□ 2.41
AP004608.1-202ENST00000533390 TESK2Q96S53 571 aa30.11■■■□□ 2.41
AP004608.1-202ENST00000533390 EIF3AQ14152 1382 aaKnown RBP30.11■■■□□ 2.41
AP004608.1-202ENST00000533390 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
AP004608.1-202ENST00000533390 CFAP70Q5T0N1 1121 aa30.1■■■□□ 2.41
AP004608.1-202ENST00000533390 TMF1P82094 1093 aa30.1■■■□□ 2.41
AP004608.1-202ENST00000533390 PRKRIP1Q9H875 184 aaPredicted RBP30.1■■■□□ 2.41
AP004608.1-202ENST00000533390 NEXMIFQ5QGS0 1516 aa30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 TRHP20396 242 aaPredicted RBP30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 ESF1Q9H501 851 aaKnown RBP30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 MYO5BQ9ULV0 1848 aa30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 PIK3C2GO75747 1445 aa30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 SETBP1Q9Y6X0 1596 aa30.06■■■□□ 2.4
AP004608.1-202ENST00000533390 FBXO31Q5XUX0 539 aaPredicted RBP30.05■■■□□ 2.4
AP004608.1-202ENST00000533390 TMEM131LA2VDJ0 1609 aa30.05■■■□□ 2.4
AP004608.1-202ENST00000533390 DISP3Q9P2K9 1392 aa30.05■■■□□ 2.4
AP004608.1-202ENST00000533390 VGFO15240 615 aaPredicted RBP30.04■■■□□ 2.4
AP004608.1-202ENST00000533390 SPATA31D1Q6ZQQ2 1576 aa30.02■■■□□ 2.4
AP004608.1-202ENST00000533390 C14orf93Q9H972 538 aaKnown RBP29.99■■■□□ 2.39
AP004608.1-202ENST00000533390 ZFYVE9O95405 1425 aa29.96■■■□□ 2.39
AP004608.1-202ENST00000533390 SLC24A1O60721 1099 aa29.96■■■□□ 2.39
AP004608.1-202ENST00000533390 CDCA8Q53HL2 280 aa29.96■■■□□ 2.39
AP004608.1-202ENST00000533390 STAG3Q9UJ98 1225 aa29.95■■■□□ 2.38
AP004608.1-202ENST00000533390 MYO3AQ8NEV4 1616 aa29.94■■■□□ 2.38
AP004608.1-202ENST00000533390 ZMYM3Q14202 1370 aa29.93■■■□□ 2.38
AP004608.1-202ENST00000533390 NUTM2DQ5VT03 806 aaPredicted RBP29.92■■■□□ 2.38
AP004608.1-202ENST00000533390 ADGRB1O14514 1584 aa29.92■■■□□ 2.38
AP004608.1-202ENST00000533390 KDM5AP29375 1690 aaKnown RBP29.88■■■□□ 2.37
AP004608.1-202ENST00000533390 SCAF1Q9H7N4 1312 aaKnown RBP29.87■■■□□ 2.37
AP004608.1-202ENST00000533390 MRS2Q9HD23 443 aa29.87■■■□□ 2.37
AP004608.1-202ENST00000533390 KTN1Q86UP2 1357 aaKnown RBP29.86■■■□□ 2.37
AP004608.1-202ENST00000533390 CNGB1Q14028 1251 aaPredicted RBP29.86■■■□□ 2.37
AP004608.1-202ENST00000533390 CENPJQ9HC77 1338 aaPredicted RBP29.84■■■□□ 2.37
AP004608.1-202ENST00000533390 SBNO2Q9Y2G9 1366 aa29.84■■■□□ 2.37
AP004608.1-202ENST00000533390 TMEM132EQ6IEE7 984 aa29.83■■■□□ 2.37
AP004608.1-202ENST00000533390 A2ML1A8K2U0 1454 aa29.83■■■□□ 2.37
AP004608.1-202ENST00000533390 CCDC184Q52MB2 194 aa29.82■■■□□ 2.37
AP004608.1-202ENST00000533390 TRAK1Q9UPV9 953 aa29.82■■■□□ 2.37
AP004608.1-202ENST00000533390 QRICH2Q9H0J4 1663 aa29.81■■■□□ 2.36
AP004608.1-202ENST00000533390 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
AP004608.1-202ENST00000533390 PANK3Q9H999 370 aa29.81■■■□□ 2.36
AP004608.1-202ENST00000533390 RALBP1Q15311 655 aa29.8■■■□□ 2.36
AP004608.1-202ENST00000533390 GTF3C3Q9Y5Q9 886 aa29.79■■■□□ 2.36
AP004608.1-202ENST00000533390 PER1O15534 1290 aaPredicted RBP29.78■■■□□ 2.36
AP004608.1-202ENST00000533390 ARHGEF28Q8N1W1 1705 aaKnown RBP29.77■■■□□ 2.36
AP004608.1-202ENST00000533390 TNRQ92752 1358 aa29.77■■■□□ 2.36
AP004608.1-202ENST00000533390 MYOM1P52179 1685 aa29.77■■■□□ 2.36
AP004608.1-202ENST00000533390 RIMS2Q9UQ26 1411 aa29.75■■■□□ 2.35
AP004608.1-202ENST00000533390 FER1L4A9Z1Z3 1794 aa29.73■■■□□ 2.35
AP004608.1-202ENST00000533390 MYBBP1AQ9BQG0 1328 aaKnown RBP29.73■■■□□ 2.35
AP004608.1-202ENST00000533390 ASXL1Q8IXJ9 1541 aa29.72■■■□□ 2.35
AP004608.1-202ENST00000533390 FAM9BQ8IZU0 186 aa29.72■■■□□ 2.35
AP004608.1-202ENST00000533390 ALKQ9UM73 1620 aa29.71■■■□□ 2.35
AP004608.1-202ENST00000533390 PARD3Q8TEW0 1356 aa29.71■■■□□ 2.35
AP004608.1-202ENST00000533390 HNRNPUQ00839 825 aaKnown RBP eCLIP29.69■■■□□ 2.34
AP004608.1-202ENST00000533390 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.69■■■□□ 2.34
AP004608.1-202ENST00000533390 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
AP004608.1-202ENST00000533390 KNSTRNQ9Y448 316 aa29.68■■■□□ 2.34
AP004608.1-202ENST00000533390 C3P01024 1663 aa29.67■■■□□ 2.34
AP004608.1-202ENST00000533390 TMC1Q8TDI8 760 aa29.67■■■□□ 2.34
AP004608.1-202ENST00000533390 UBR1Q8IWV7 1749 aa29.66■■■□□ 2.34
AP004608.1-202ENST00000533390 HDGFP51858 240 aaKnown RBP29.66■■■□□ 2.34
AP004608.1-202ENST00000533390 BRD4O60885 1362 aaPredicted RBP29.65■■■□□ 2.34
AP004608.1-202ENST00000533390 YTHDC2Q9H6S0 1430 aaKnown RBP29.64■■■□□ 2.34
AP004608.1-202ENST00000533390 CC2D1BQ5T0F9 858 aaKnown RBP29.64■■■□□ 2.34
AP004608.1-202ENST00000533390 NLRP1Q9C000 1473 aa29.63■■■□□ 2.33
AP004608.1-202ENST00000533390 STK26Q9P289 416 aa29.63■■■□□ 2.33
AP004608.1-202ENST00000533390 NLRP13Q86W25 1043 aa29.6■■■□□ 2.33
AP004608.1-202ENST00000533390 SETD1AO15047 1707 aaKnown RBP29.6■■■□□ 2.33
AP004608.1-202ENST00000533390 EVC2Q86UK5 1308 aa29.6■■■□□ 2.33
AP004608.1-202ENST00000533390 CEBPAP49715 358 aaPredicted RBP29.59■■■□□ 2.33
AP004608.1-202ENST00000533390 PTPRMP28827 1452 aa29.58■■■□□ 2.33
AP004608.1-202ENST00000533390 PUS7Q96PZ0 661 aaKnown RBP29.57■■■□□ 2.32
AP004608.1-202ENST00000533390 TMEM2Q9UHN6 1383 aa29.56■■■□□ 2.32
AP004608.1-202ENST00000533390 NRXN3Q9Y4C0 1643 aa29.55■■■□□ 2.32
AP004608.1-202ENST00000533390 TULP4Q9NRJ4 1543 aa29.55■■■□□ 2.32
AP004608.1-202ENST00000533390 PNISRQ8TF01 805 aaKnown RBP29.54■■■□□ 2.32
AP004608.1-202ENST00000533390 POGKQ9P215 609 aa29.54■■■□□ 2.32
AP004608.1-202ENST00000533390 NPC1L1Q9UHC9 1359 aa29.53■■■□□ 2.32
AP004608.1-202ENST00000533390 AMER1Q5JTC6 1135 aaPredicted RBP29.53■■■□□ 2.32
AP004608.1-202ENST00000533390 SAFB2Q14151 953 aaKnown RBP eCLIP29.53■■■□□ 2.32
AP004608.1-202ENST00000533390 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
AP004608.1-202ENST00000533390 PRAM1Q96QH2 718 aa29.51■■■□□ 2.31
AP004608.1-202ENST00000533390 LRPPRCP42704 1394 aaKnown RBP29.5■■■□□ 2.31
AP004608.1-202ENST00000533390 PLPPR3Q6T4P5 718 aa29.49■■■□□ 2.31
AP004608.1-202ENST00000533390 ZBED9Q6R2W3 1325 aa29.46■■■□□ 2.31
AP004608.1-202ENST00000533390 BCANQ96GW7 911 aa29.46■■■□□ 2.31
AP004608.1-202ENST00000533390 ABCC11Q96J66 1382 aa29.45■■■□□ 2.3
AP004608.1-202ENST00000533390 SLC12A5Q9H2X9 1139 aa29.44■■■□□ 2.3
AP004608.1-202ENST00000533390 RIMS1Q86UR5 1692 aaKnown RBP29.44■■■□□ 2.3
AP004608.1-202ENST00000533390 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
AP004608.1-202ENST00000533390 CARD14Q9BXL6 1004 aa29.44■■■□□ 2.3
AP004608.1-202ENST00000533390 CABP2Q9NPB3 220 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms