RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
CACNA1E-208ENST00000533229 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
CACNA1E-208ENST00000533229 LMTK2Q8IWU2 1503 aa20.54■□□□□ 0.88
CACNA1E-208ENST00000533229 CDCA8Q53HL2 280 aa20.54■□□□□ 0.88
CACNA1E-208ENST00000533229 GGT6Q6P531 493 aa20.54■□□□□ 0.88
CACNA1E-208ENST00000533229 MYOM2P54296 1465 aa20.53■□□□□ 0.88
CACNA1E-208ENST00000533229 FRMPD1Q5SYB0 1578 aa20.53■□□□□ 0.88
CACNA1E-208ENST00000533229 CDCA7LQ96GN5 454 aa20.53■□□□□ 0.88
CACNA1E-208ENST00000533229 MLH3Q9UHC1 1453 aa20.52■□□□□ 0.88
CACNA1E-208ENST00000533229 MAP3K4Q9Y6R4 1608 aa20.52■□□□□ 0.88
CACNA1E-208ENST00000533229 EIF3AQ14152 1382 aaKnown RBP20.52■□□□□ 0.88
CACNA1E-208ENST00000533229 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
CACNA1E-208ENST00000533229 BLMP54132 1417 aaPredicted RBP20.51■□□□□ 0.87
CACNA1E-208ENST00000533229 NPATQ14207 1427 aa20.51■□□□□ 0.87
CACNA1E-208ENST00000533229 ABCA6Q8N139 1617 aa20.5■□□□□ 0.87
CACNA1E-208ENST00000533229 RAPGEF3O95398 923 aa20.5■□□□□ 0.87
CACNA1E-208ENST00000533229 INSRP06213 1382 aa20.49■□□□□ 0.87
CACNA1E-208ENST00000533229 PDE3BQ13370 1112 aa20.49■□□□□ 0.87
CACNA1E-208ENST00000533229 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
CACNA1E-208ENST00000533229 SYNMO15061 1565 aa20.49■□□□□ 0.87
CACNA1E-208ENST00000533229 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
CACNA1E-208ENST00000533229 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
CACNA1E-208ENST00000533229 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
CACNA1E-208ENST00000533229 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
CACNA1E-208ENST00000533229 RCAN3Q9UKA8 241 aa20.47■□□□□ 0.87
CACNA1E-208ENST00000533229 NOS1P29475 1434 aa20.47■□□□□ 0.87
CACNA1E-208ENST00000533229 RRP1P56182 461 aaKnown RBP20.47■□□□□ 0.87
CACNA1E-208ENST00000533229 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
CACNA1E-208ENST00000533229 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
CACNA1E-208ENST00000533229 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
CACNA1E-208ENST00000533229 MYOM1P52179 1685 aa20.45■□□□□ 0.86
CACNA1E-208ENST00000533229 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
CACNA1E-208ENST00000533229 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
CACNA1E-208ENST00000533229 HECW2Q9P2P5 1572 aa20.44■□□□□ 0.86
CACNA1E-208ENST00000533229 KIF1BO60333 1816 aa20.44■□□□□ 0.86
CACNA1E-208ENST00000533229 ASXL1Q8IXJ9 1541 aa20.44■□□□□ 0.86
CACNA1E-208ENST00000533229 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
CACNA1E-208ENST00000533229 CARD14Q9BXL6 1004 aa20.42■□□□□ 0.86
CACNA1E-208ENST00000533229 MSH5O43196 834 aa20.42■□□□□ 0.86
CACNA1E-208ENST00000533229 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
CACNA1E-208ENST00000533229 ABCC3O15438 1527 aa20.4■□□□□ 0.86
CACNA1E-208ENST00000533229 EXOC6Q8TAG9 804 aa20.39■□□□□ 0.86
CACNA1E-208ENST00000533229 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.86
CACNA1E-208ENST00000533229 NEO1Q92859 1461 aa20.39■□□□□ 0.86
CACNA1E-208ENST00000533229 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.86
CACNA1E-208ENST00000533229 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
CACNA1E-208ENST00000533229 SLC24A1O60721 1099 aa20.39■□□□□ 0.85
CACNA1E-208ENST00000533229 TRAK1Q9UPV9 953 aa20.39■□□□□ 0.85
CACNA1E-208ENST00000533229 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
CACNA1E-208ENST00000533229 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
CACNA1E-208ENST00000533229 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
CACNA1E-208ENST00000533229 CENPJQ9HC77 1338 aaPredicted RBP20.37■□□□□ 0.85
CACNA1E-208ENST00000533229 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
CACNA1E-208ENST00000533229 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
CACNA1E-208ENST00000533229 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
CACNA1E-208ENST00000533229 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
CACNA1E-208ENST00000533229 PLIN1O60240 522 aa20.34■□□□□ 0.85
CACNA1E-208ENST00000533229 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
CACNA1E-208ENST00000533229 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
CACNA1E-208ENST00000533229 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.85
CACNA1E-208ENST00000533229 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
CACNA1E-208ENST00000533229 DIP2CQ9Y2E4 1556 aa20.33■□□□□ 0.84
CACNA1E-208ENST00000533229 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
CACNA1E-208ENST00000533229 YEATS2Q9ULM3 1422 aa20.31■□□□□ 0.84
CACNA1E-208ENST00000533229 PPLO60437 1756 aa20.31■□□□□ 0.84
CACNA1E-208ENST00000533229 SIGLEC1Q9BZZ2 1709 aa20.31■□□□□ 0.84
CACNA1E-208ENST00000533229 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
CACNA1E-208ENST00000533229 CAMSAP1Q5T5Y3 1602 aa20.29■□□□□ 0.84
CACNA1E-208ENST00000533229 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
CACNA1E-208ENST00000533229 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
CACNA1E-208ENST00000533229 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
CACNA1E-208ENST00000533229 IDI1Q13907 227 aa20.29■□□□□ 0.84
CACNA1E-208ENST00000533229 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
CACNA1E-208ENST00000533229 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
CACNA1E-208ENST00000533229 PIK3C2BO00750 1634 aa20.25■□□□□ 0.83
CACNA1E-208ENST00000533229 GOLGA2Q08379 1002 aa20.25■□□□□ 0.83
CACNA1E-208ENST00000533229 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
CACNA1E-208ENST00000533229 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
CACNA1E-208ENST00000533229 APAF1O14727 1248 aa20.24■□□□□ 0.83
CACNA1E-208ENST00000533229 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
CACNA1E-208ENST00000533229 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
CACNA1E-208ENST00000533229 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
CACNA1E-208ENST00000533229 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
CACNA1E-208ENST00000533229 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
CACNA1E-208ENST00000533229 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
CACNA1E-208ENST00000533229 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
CACNA1E-208ENST00000533229 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
CACNA1E-208ENST00000533229 ZC3H13Q5T200 1668 aaKnown RBP20.2■□□□□ 0.82
CACNA1E-208ENST00000533229 TRMT2AQ8IZ69 625 aaKnown RBP20.2■□□□□ 0.82
CACNA1E-208ENST00000533229 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
CACNA1E-208ENST00000533229 GLI2P10070 1586 aa20.19■□□□□ 0.82
CACNA1E-208ENST00000533229 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
CACNA1E-208ENST00000533229 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
CACNA1E-208ENST00000533229 FAM69CQ0P6D2 419 aa20.17■□□□□ 0.82
CACNA1E-208ENST00000533229 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
CACNA1E-208ENST00000533229 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
CACNA1E-208ENST00000533229 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
CACNA1E-208ENST00000533229 TULP4Q9NRJ4 1543 aa20.16■□□□□ 0.82
CACNA1E-208ENST00000533229 EVC2Q86UK5 1308 aa20.16■□□□□ 0.82
CACNA1E-208ENST00000533229 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms