RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
SRPRA-207ENST00000532268 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
SRPRA-207ENST00000532268 BCANQ96GW7 911 aa13.59□□□□□ -0.23
SRPRA-207ENST00000532268 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
SRPRA-207ENST00000532268 STRCQ7RTU9 1775 aa13.58□□□□□ -0.23
SRPRA-207ENST00000532268 RIMS2Q9UQ26 1411 aa13.58□□□□□ -0.24
SRPRA-207ENST00000532268 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
SRPRA-207ENST00000532268 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-207ENST00000532268 ZNF142P52746 1687 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-207ENST00000532268 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-207ENST00000532268 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
SRPRA-207ENST00000532268 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
SRPRA-207ENST00000532268 EID1Q9Y6B2 187 aa13.57□□□□□ -0.24
SRPRA-207ENST00000532268 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
SRPRA-207ENST00000532268 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
SRPRA-207ENST00000532268 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
SRPRA-207ENST00000532268 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
SRPRA-207ENST00000532268 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
SRPRA-207ENST00000532268 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
SRPRA-207ENST00000532268 MYOM2P54296 1465 aa13.54□□□□□ -0.24
SRPRA-207ENST00000532268 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
SRPRA-207ENST00000532268 PPLO60437 1756 aa13.53□□□□□ -0.24
SRPRA-207ENST00000532268 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
SRPRA-207ENST00000532268 IFT172Q9UG01 1749 aa13.52□□□□□ -0.25
SRPRA-207ENST00000532268 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
SRPRA-207ENST00000532268 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
SRPRA-207ENST00000532268 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
SRPRA-207ENST00000532268 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
SRPRA-207ENST00000532268 LTKP29376 864 aa13.5□□□□□ -0.25
SRPRA-207ENST00000532268 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
SRPRA-207ENST00000532268 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
SRPRA-207ENST00000532268 SLIT1O75093 1534 aa13.49□□□□□ -0.25
SRPRA-207ENST00000532268 NBPF1Q3BBV0 1214 aa13.48□□□□□ -0.25
SRPRA-207ENST00000532268 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
SRPRA-207ENST00000532268 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
SRPRA-207ENST00000532268 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
SRPRA-207ENST00000532268 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
SRPRA-207ENST00000532268 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
SRPRA-207ENST00000532268 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
SRPRA-207ENST00000532268 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.26
SRPRA-207ENST00000532268 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
SRPRA-207ENST00000532268 POLR1AO95602 1720 aaPredicted RBP13.45□□□□□ -0.26
SRPRA-207ENST00000532268 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
SRPRA-207ENST00000532268 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRPRA-207ENST00000532268 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
SRPRA-207ENST00000532268 STK26Q9P289 416 aa13.44□□□□□ -0.26
SRPRA-207ENST00000532268 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
SRPRA-207ENST00000532268 USP47Q96K76 1375 aa13.42□□□□□ -0.26
SRPRA-207ENST00000532268 LAMC1P11047 1609 aa13.42□□□□□ -0.26
SRPRA-207ENST00000532268 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
SRPRA-207ENST00000532268 MED14O60244 1454 aa13.42□□□□□ -0.26
SRPRA-207ENST00000532268 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
SRPRA-207ENST00000532268 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
SRPRA-207ENST00000532268 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-207ENST00000532268 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
SRPRA-207ENST00000532268 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
SRPRA-207ENST00000532268 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
SRPRA-207ENST00000532268 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
SRPRA-207ENST00000532268 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
SRPRA-207ENST00000532268 EIF3AQ14152 1382 aaKnown RBP13.39□□□□□ -0.27
SRPRA-207ENST00000532268 TBX22Q9Y458 520 aa13.38□□□□□ -0.27
SRPRA-207ENST00000532268 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
SRPRA-207ENST00000532268 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
SRPRA-207ENST00000532268 METP08581 1390 aa13.37□□□□□ -0.27
SRPRA-207ENST00000532268 POGKQ9P215 609 aa13.37□□□□□ -0.27
SRPRA-207ENST00000532268 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
SRPRA-207ENST00000532268 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
SRPRA-207ENST00000532268 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
SRPRA-207ENST00000532268 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRPRA-207ENST00000532268 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
SRPRA-207ENST00000532268 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
SRPRA-207ENST00000532268 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
SRPRA-207ENST00000532268 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
SRPRA-207ENST00000532268 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
SRPRA-207ENST00000532268 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
SRPRA-207ENST00000532268 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
SRPRA-207ENST00000532268 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
SRPRA-207ENST00000532268 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
SRPRA-207ENST00000532268 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
SRPRA-207ENST00000532268 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
SRPRA-207ENST00000532268 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
SRPRA-207ENST00000532268 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
SRPRA-207ENST00000532268 WAPLQ7Z5K2 1190 aa13.3□□□□□ -0.28
SRPRA-207ENST00000532268 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
SRPRA-207ENST00000532268 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
SRPRA-207ENST00000532268 KCNA6P17658 529 aa13.29□□□□□ -0.28
SRPRA-207ENST00000532268 TMF1P82094 1093 aa13.29□□□□□ -0.28
SRPRA-207ENST00000532268 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
SRPRA-207ENST00000532268 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
SRPRA-207ENST00000532268 CPS1P31327 1500 aa13.28□□□□□ -0.28
SRPRA-207ENST00000532268 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
SRPRA-207ENST00000532268 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.28
SRPRA-207ENST00000532268 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
SRPRA-207ENST00000532268 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
SRPRA-207ENST00000532268 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
SRPRA-207ENST00000532268 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
SRPRA-207ENST00000532268 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.29
SRPRA-207ENST00000532268 TECPR2O15040 1411 aa13.26□□□□□ -0.29
SRPRA-207ENST00000532268 TESK2Q96S53 571 aa13.26□□□□□ -0.29
SRPRA-207ENST00000532268 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms