RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 CEP152O94986 1710 aa18.64■□□□□ 0.57
LRRK1-209ENST00000532145 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
LRRK1-209ENST00000532145 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
LRRK1-209ENST00000532145 ZFYVE16Q7Z3T8 1539 aa18.63■□□□□ 0.57
LRRK1-209ENST00000532145 ZNF521Q96K83 1311 aa18.63■□□□□ 0.57
LRRK1-209ENST00000532145 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
LRRK1-209ENST00000532145 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
LRRK1-209ENST00000532145 PIK3C2GO75747 1445 aa18.62■□□□□ 0.57
LRRK1-209ENST00000532145 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
LRRK1-209ENST00000532145 ASXL1Q8IXJ9 1541 aa18.62■□□□□ 0.57
LRRK1-209ENST00000532145 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
LRRK1-209ENST00000532145 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.57
LRRK1-209ENST00000532145 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
LRRK1-209ENST00000532145 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
LRRK1-209ENST00000532145 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
LRRK1-209ENST00000532145 TET3O43151 1660 aa18.59■□□□□ 0.57
LRRK1-209ENST00000532145 AFAP1Q8N556 730 aa18.59■□□□□ 0.57
LRRK1-209ENST00000532145 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.56
LRRK1-209ENST00000532145 VWDEQ8N2E2 1590 aa18.58■□□□□ 0.56
LRRK1-209ENST00000532145 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.56
LRRK1-209ENST00000532145 MYOM1P52179 1685 aa18.57■□□□□ 0.56
LRRK1-209ENST00000532145 KDM2BQ8NHM5 1336 aa18.57■□□□□ 0.56
LRRK1-209ENST00000532145 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
LRRK1-209ENST00000532145 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
LRRK1-209ENST00000532145 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
LRRK1-209ENST00000532145 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
LRRK1-209ENST00000532145 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
LRRK1-209ENST00000532145 KANK1Q14678 1352 aa18.54■□□□□ 0.56
LRRK1-209ENST00000532145 INO80Q9ULG1 1556 aaPredicted RBP18.53■□□□□ 0.56
LRRK1-209ENST00000532145 TRMT2AQ8IZ69 625 aaKnown RBP18.53■□□□□ 0.56
LRRK1-209ENST00000532145 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
LRRK1-209ENST00000532145 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
LRRK1-209ENST00000532145 ATP7AQ04656 1500 aa18.52■□□□□ 0.56
LRRK1-209ENST00000532145 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
LRRK1-209ENST00000532145 MYOM2P54296 1465 aa18.52■□□□□ 0.55
LRRK1-209ENST00000532145 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.51■□□□□ 0.55
LRRK1-209ENST00000532145 SKAP1Q86WV1 359 aa18.5■□□□□ 0.55
LRRK1-209ENST00000532145 ABCA9Q8IUA7 1624 aa18.49■□□□□ 0.55
LRRK1-209ENST00000532145 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
LRRK1-209ENST00000532145 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
LRRK1-209ENST00000532145 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
LRRK1-209ENST00000532145 FANCAO15360 1455 aa18.48■□□□□ 0.55
LRRK1-209ENST00000532145 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
LRRK1-209ENST00000532145 MROH1Q8NDA8 1641 aa18.47■□□□□ 0.55
LRRK1-209ENST00000532145 KIF3BO15066 747 aa18.47■□□□□ 0.55
LRRK1-209ENST00000532145 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
LRRK1-209ENST00000532145 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
LRRK1-209ENST00000532145 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
LRRK1-209ENST00000532145 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
LRRK1-209ENST00000532145 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 NRXN1Q9ULB1 1477 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 APAF1O14727 1248 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
LRRK1-209ENST00000532145 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
LRRK1-209ENST00000532145 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LRRK1-209ENST00000532145 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
LRRK1-209ENST00000532145 E9PSI1 815 aa18.42■□□□□ 0.54
LRRK1-209ENST00000532145 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
LRRK1-209ENST00000532145 MYO3AQ8NEV4 1616 aa18.42■□□□□ 0.54
LRRK1-209ENST00000532145 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
LRRK1-209ENST00000532145 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
LRRK1-209ENST00000532145 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
LRRK1-209ENST00000532145 NEFMP07197 916 aa18.41■□□□□ 0.54
LRRK1-209ENST00000532145 FAM161AQ3B820 660 aa18.41■□□□□ 0.54
LRRK1-209ENST00000532145 KIF1BO60333 1816 aa18.4■□□□□ 0.54
LRRK1-209ENST00000532145 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
LRRK1-209ENST00000532145 C8orf34Q49A92 452 aa18.39■□□□□ 0.53
LRRK1-209ENST00000532145 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
LRRK1-209ENST00000532145 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
LRRK1-209ENST00000532145 PPRC1Q5VV67 1664 aaKnown RBP18.36■□□□□ 0.53
LRRK1-209ENST00000532145 BCAR3O75815 825 aa18.36■□□□□ 0.53
LRRK1-209ENST00000532145 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
LRRK1-209ENST00000532145 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
LRRK1-209ENST00000532145 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
LRRK1-209ENST00000532145 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
LRRK1-209ENST00000532145 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-209ENST00000532145 NINLQ9Y2I6 1382 aa18.34■□□□□ 0.53
LRRK1-209ENST00000532145 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
LRRK1-209ENST00000532145 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
LRRK1-209ENST00000532145 NOS1P29475 1434 aa18.32■□□□□ 0.52
LRRK1-209ENST00000532145 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
LRRK1-209ENST00000532145 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
LRRK1-209ENST00000532145 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
LRRK1-209ENST00000532145 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
LRRK1-209ENST00000532145 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
LRRK1-209ENST00000532145 RGS3P49796 1198 aa18.29■□□□□ 0.52
LRRK1-209ENST00000532145 ASXL2Q76L83 1435 aa18.29■□□□□ 0.52
LRRK1-209ENST00000532145 ADGRB1O14514 1584 aa18.28■□□□□ 0.52
LRRK1-209ENST00000532145 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
LRRK1-209ENST00000532145 IGHDP01880 384 aa18.28■□□□□ 0.52
LRRK1-209ENST00000532145 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
LRRK1-209ENST00000532145 MORC1Q86VD1 984 aa18.27■□□□□ 0.52
LRRK1-209ENST00000532145 NPATQ14207 1427 aa18.27■□□□□ 0.52
LRRK1-209ENST00000532145 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.51
LRRK1-209ENST00000532145 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.51
LRRK1-209ENST00000532145 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
LRRK1-209ENST00000532145 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
LRRK1-209ENST00000532145 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms