RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
CTNND1-228ENST00000531007 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
CTNND1-228ENST00000531007 EFCAB6Q5THR3 1501 aa14.17□□□□□ -0.14
CTNND1-228ENST00000531007 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
CTNND1-228ENST00000531007 PTPRTO14522 1441 aa14.16□□□□□ -0.14
CTNND1-228ENST00000531007 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
CTNND1-228ENST00000531007 WASHC2CQ9Y4E1 1318 aa14.15□□□□□ -0.14
CTNND1-228ENST00000531007 GGT6Q6P531 493 aa14.15□□□□□ -0.14
CTNND1-228ENST00000531007 ABCC3O15438 1527 aa14.15□□□□□ -0.14
CTNND1-228ENST00000531007 TRPM2O94759 1503 aa14.15□□□□□ -0.14
CTNND1-228ENST00000531007 E9PCH4 1651 aa14.14□□□□□ -0.15
CTNND1-228ENST00000531007 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
CTNND1-228ENST00000531007 STAC3Q96MF2 364 aa14.13□□□□□ -0.15
CTNND1-228ENST00000531007 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
CTNND1-228ENST00000531007 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
CTNND1-228ENST00000531007 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
CTNND1-228ENST00000531007 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
CTNND1-228ENST00000531007 CEP152O94986 1710 aa14.1□□□□□ -0.15
CTNND1-228ENST00000531007 CAMSAP1Q5T5Y3 1602 aa14.1□□□□□ -0.15
CTNND1-228ENST00000531007 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
CTNND1-228ENST00000531007 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
CTNND1-228ENST00000531007 NPATQ14207 1427 aa14.08□□□□□ -0.15
CTNND1-228ENST00000531007 L3MBTL2Q969R5 705 aa14.08□□□□□ -0.16
CTNND1-228ENST00000531007 NOS1P29475 1434 aa14.07□□□□□ -0.16
CTNND1-228ENST00000531007 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
CTNND1-228ENST00000531007 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
CTNND1-228ENST00000531007 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
CTNND1-228ENST00000531007 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CTNND1-228ENST00000531007 ARID4BQ4LE39 1312 aaPredicted RBP14.03□□□□□ -0.16
CTNND1-228ENST00000531007 SPATA31E1Q6ZUB1 1445 aa14.03□□□□□ -0.16
CTNND1-228ENST00000531007 MROH2AA6NES4 1674 aa14.02□□□□□ -0.16
CTNND1-228ENST00000531007 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-228ENST00000531007 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
CTNND1-228ENST00000531007 KDM4FA0A1W2PPD8 638 aa14.01□□□□□ -0.17
CTNND1-228ENST00000531007 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
CTNND1-228ENST00000531007 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
CTNND1-228ENST00000531007 SIGLEC1Q9BZZ2 1709 aa14.01□□□□□ -0.17
CTNND1-228ENST00000531007 KIF1BO60333 1816 aa14□□□□□ -0.17
CTNND1-228ENST00000531007 CLCN6P51797 869 aa14□□□□□ -0.17
CTNND1-228ENST00000531007 CLTCQ00610 1675 aaKnown RBP14□□□□□ -0.17
CTNND1-228ENST00000531007 PIK3C2BO00750 1634 aa14□□□□□ -0.17
CTNND1-228ENST00000531007 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CTNND1-228ENST00000531007 PREX1Q8TCU6 1659 aa13.99□□□□□ -0.17
CTNND1-228ENST00000531007 GABBR2O75899 941 aa13.99□□□□□ -0.17
CTNND1-228ENST00000531007 SPATA31D1Q6ZQQ2 1576 aa13.99□□□□□ -0.17
CTNND1-228ENST00000531007 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
CTNND1-228ENST00000531007 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
CTNND1-228ENST00000531007 ZMYM3Q14202 1370 aa13.97□□□□□ -0.17
CTNND1-228ENST00000531007 ADGRB3O60242 1522 aa13.97□□□□□ -0.17
CTNND1-228ENST00000531007 SYNMO15061 1565 aa13.96□□□□□ -0.18
CTNND1-228ENST00000531007 MYOM2P54296 1465 aa13.95□□□□□ -0.18
CTNND1-228ENST00000531007 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
CTNND1-228ENST00000531007 MLECQ14165 292 aa13.95□□□□□ -0.18
CTNND1-228ENST00000531007 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
CTNND1-228ENST00000531007 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
CTNND1-228ENST00000531007 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTNND1-228ENST00000531007 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
CTNND1-228ENST00000531007 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
CTNND1-228ENST00000531007 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
CTNND1-228ENST00000531007 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
CTNND1-228ENST00000531007 IDI1Q13907 227 aa13.91□□□□□ -0.18
CTNND1-228ENST00000531007 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
CTNND1-228ENST00000531007 UGGT1Q9NYU2 1555 aa13.91□□□□□ -0.18
CTNND1-228ENST00000531007 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
CTNND1-228ENST00000531007 LAMC1P11047 1609 aa13.9□□□□□ -0.18
CTNND1-228ENST00000531007 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
CTNND1-228ENST00000531007 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CTNND1-228ENST00000531007 GPRASP1Q5JY77 1395 aa13.9□□□□□ -0.18
CTNND1-228ENST00000531007 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
CTNND1-228ENST00000531007 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
CTNND1-228ENST00000531007 TNRQ92752 1358 aa13.89□□□□□ -0.19
CTNND1-228ENST00000531007 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
CTNND1-228ENST00000531007 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
CTNND1-228ENST00000531007 TMEM131LA2VDJ0 1609 aa13.89□□□□□ -0.19
CTNND1-228ENST00000531007 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
CTNND1-228ENST00000531007 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
CTNND1-228ENST00000531007 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
CTNND1-228ENST00000531007 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
CTNND1-228ENST00000531007 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
CTNND1-228ENST00000531007 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
CTNND1-228ENST00000531007 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
CTNND1-228ENST00000531007 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
CTNND1-228ENST00000531007 NUBP1P53384 320 aa13.87□□□□□ -0.19
CTNND1-228ENST00000531007 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
CTNND1-228ENST00000531007 PPLO60437 1756 aa13.86□□□□□ -0.19
CTNND1-228ENST00000531007 ADAMTSL3P82987 1691 aa13.86□□□□□ -0.19
CTNND1-228ENST00000531007 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
CTNND1-228ENST00000531007 C3P01024 1663 aa13.85□□□□□ -0.19
CTNND1-228ENST00000531007 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
CTNND1-228ENST00000531007 CARD11Q9BXL7 1154 aa13.85□□□□□ -0.19
CTNND1-228ENST00000531007 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
CTNND1-228ENST00000531007 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTNND1-228ENST00000531007 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
CTNND1-228ENST00000531007 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
CTNND1-228ENST00000531007 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
CTNND1-228ENST00000531007 USP47Q96K76 1375 aa13.83□□□□□ -0.2
CTNND1-228ENST00000531007 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
CTNND1-228ENST00000531007 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
CTNND1-228ENST00000531007 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
CTNND1-228ENST00000531007 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms