RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 POTEAQ6S8J7 498 aa12.81□□□□□ -0.36
CTSF-208ENST00000530565 NUP155O75694 1391 aa12.81□□□□□ -0.36
CTSF-208ENST00000530565 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
CTSF-208ENST00000530565 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
CTSF-208ENST00000530565 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
CTSF-208ENST00000530565 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
CTSF-208ENST00000530565 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
CTSF-208ENST00000530565 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
CTSF-208ENST00000530565 ADGRB3O60242 1522 aa12.77□□□□□ -0.37
CTSF-208ENST00000530565 KCNA6P17658 529 aa12.76□□□□□ -0.37
CTSF-208ENST00000530565 ACIN1Q9UKV3 1341 aaKnown RBP12.76□□□□□ -0.37
CTSF-208ENST00000530565 NOS1P29475 1434 aa12.76□□□□□ -0.37
CTSF-208ENST00000530565 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
CTSF-208ENST00000530565 E9PCH4 1651 aa12.75□□□□□ -0.37
CTSF-208ENST00000530565 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
CTSF-208ENST00000530565 IDI1Q13907 227 aa12.75□□□□□ -0.37
CTSF-208ENST00000530565 RBM33Q96EV2 1170 aaKnown RBP12.75□□□□□ -0.37
CTSF-208ENST00000530565 RPRD2Q5VT52 1461 aaKnown RBP12.74□□□□□ -0.37
CTSF-208ENST00000530565 CHD2O14647 1828 aaKnown RBP12.74□□□□□ -0.37
CTSF-208ENST00000530565 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
CTSF-208ENST00000530565 HRCP23327 699 aa12.73□□□□□ -0.37
CTSF-208ENST00000530565 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
CTSF-208ENST00000530565 MYO5BQ9ULV0 1848 aa12.73□□□□□ -0.37
CTSF-208ENST00000530565 ZFYVE9O95405 1425 aa12.71□□□□□ -0.37
CTSF-208ENST00000530565 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.37
CTSF-208ENST00000530565 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
CTSF-208ENST00000530565 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
CTSF-208ENST00000530565 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
CTSF-208ENST00000530565 LRP6O75581 1613 aa12.7□□□□□ -0.38
CTSF-208ENST00000530565 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
CTSF-208ENST00000530565 MSH6P52701 1360 aa12.69□□□□□ -0.38
CTSF-208ENST00000530565 JCADQ9P266 1359 aa12.69□□□□□ -0.38
CTSF-208ENST00000530565 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
CTSF-208ENST00000530565 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
CTSF-208ENST00000530565 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
CTSF-208ENST00000530565 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
CTSF-208ENST00000530565 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
CTSF-208ENST00000530565 SHPRHQ149N8 1683 aa12.66□□□□□ -0.38
CTSF-208ENST00000530565 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
CTSF-208ENST00000530565 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
CTSF-208ENST00000530565 RIMS2Q9UQ26 1411 aa12.64□□□□□ -0.39
CTSF-208ENST00000530565 TRPM2O94759 1503 aa12.64□□□□□ -0.39
CTSF-208ENST00000530565 FOXD1Q16676 465 aa12.64□□□□□ -0.39
CTSF-208ENST00000530565 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
CTSF-208ENST00000530565 ADAMTS13Q76LX8 1427 aa12.63□□□□□ -0.39
CTSF-208ENST00000530565 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
CTSF-208ENST00000530565 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTSF-208ENST00000530565 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
CTSF-208ENST00000530565 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
CTSF-208ENST00000530565 SPATA31A6Q5VVP1 1343 aa12.61□□□□□ -0.39
CTSF-208ENST00000530565 BCANQ96GW7 911 aa12.6□□□□□ -0.39
CTSF-208ENST00000530565 PTPRUQ92729 1446 aa12.58□□□□□ -0.4
CTSF-208ENST00000530565 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
CTSF-208ENST00000530565 KIF1BO60333 1816 aa12.58□□□□□ -0.4
CTSF-208ENST00000530565 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
CTSF-208ENST00000530565 PIK3R4Q99570 1358 aa12.57□□□□□ -0.4
CTSF-208ENST00000530565 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
CTSF-208ENST00000530565 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
CTSF-208ENST00000530565 CCDC144AA2RUR9 1427 aa12.57□□□□□ -0.4
CTSF-208ENST00000530565 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
CTSF-208ENST00000530565 NRXN3Q9Y4C0 1643 aa12.57□□□□□ -0.4
CTSF-208ENST00000530565 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
CTSF-208ENST00000530565 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
CTSF-208ENST00000530565 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
CTSF-208ENST00000530565 CDK12Q9NYV4 1490 aaPredicted RBP12.56□□□□□ -0.4
CTSF-208ENST00000530565 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
CTSF-208ENST00000530565 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
CTSF-208ENST00000530565 ASXL1Q8IXJ9 1541 aa12.55□□□□□ -0.4
CTSF-208ENST00000530565 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
CTSF-208ENST00000530565 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
CTSF-208ENST00000530565 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTSF-208ENST00000530565 DCCP43146 1447 aa12.54□□□□□ -0.4
CTSF-208ENST00000530565 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
CTSF-208ENST00000530565 MST1RQ04912 1400 aa12.53□□□□□ -0.4
CTSF-208ENST00000530565 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
CTSF-208ENST00000530565 ATF3P18847 181 aa12.52□□□□□ -0.41
CTSF-208ENST00000530565 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
CTSF-208ENST00000530565 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
CTSF-208ENST00000530565 RXRBP28702 533 aa12.51□□□□□ -0.41
CTSF-208ENST00000530565 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
CTSF-208ENST00000530565 AMOTL2Q9Y2J4 779 aa12.51□□□□□ -0.41
CTSF-208ENST00000530565 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
CTSF-208ENST00000530565 AFF2P51816 1311 aa12.5□□□□□ -0.41
CTSF-208ENST00000530565 RGS12O14924 1447 aa12.5□□□□□ -0.41
CTSF-208ENST00000530565 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
CTSF-208ENST00000530565 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
CTSF-208ENST00000530565 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
CTSF-208ENST00000530565 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
CTSF-208ENST00000530565 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
CTSF-208ENST00000530565 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
CTSF-208ENST00000530565 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
CTSF-208ENST00000530565 PPLO60437 1756 aa12.48□□□□□ -0.41
CTSF-208ENST00000530565 LAMC1P11047 1609 aa12.48□□□□□ -0.41
CTSF-208ENST00000530565 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
CTSF-208ENST00000530565 IFT172Q9UG01 1749 aa12.47□□□□□ -0.41
CTSF-208ENST00000530565 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
CTSF-208ENST00000530565 METP08581 1390 aa12.45□□□□□ -0.42
CTSF-208ENST00000530565 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
CTSF-208ENST00000530565 SIN3AQ96ST3 1273 aa12.45□□□□□ -0.42
CTSF-208ENST00000530565 EP400Q96L91 3159 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms