RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 DIXDC1Q155Q3 683 aa7.91□□□□□ -1.14
SVIP-203ENST00000529848 KIAA1468Q9P260 1216 aa7.91□□□□□ -1.14
SVIP-203ENST00000529848 DDX11L8A8MPP1 907 aa7.9□□□□□ -1.14
SVIP-203ENST00000529848 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
SVIP-203ENST00000529848 PBX2P40425 430 aa7.9□□□□□ -1.14
SVIP-203ENST00000529848 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
SVIP-203ENST00000529848 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
SVIP-203ENST00000529848 DMRTA1Q5VZB9 504 aa7.88□□□□□ -1.15
SVIP-203ENST00000529848 RABGEF1Q9UJ41 708 aa7.88□□□□□ -1.15
SVIP-203ENST00000529848 CD46P15529 392 aa7.87□□□□□ -1.15
SVIP-203ENST00000529848 HDGFP51858 240 aaKnown RBP7.87□□□□□ -1.15
SVIP-203ENST00000529848 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
SVIP-203ENST00000529848 TBC1D2Q9BYX2 928 aa7.87□□□□□ -1.15
SVIP-203ENST00000529848 POLR3EQ9NVU0 708 aa7.87□□□□□ -1.15
SVIP-203ENST00000529848 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
SVIP-203ENST00000529848 RSPH4AQ5TD94 716 aa7.86□□□□□ -1.15
SVIP-203ENST00000529848 MYSM1Q5VVJ2 828 aa7.86□□□□□ -1.15
SVIP-203ENST00000529848 NUTM1Q86Y26 1132 aa7.86□□□□□ -1.15
SVIP-203ENST00000529848 RDH13Q8NBN7 331 aa7.86□□□□□ -1.15
SVIP-203ENST00000529848 SLC4A3P48751 1232 aa7.85□□□□□ -1.15
SVIP-203ENST00000529848 FLIIQ13045 1269 aa7.85□□□□□ -1.15
SVIP-203ENST00000529848 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
SVIP-203ENST00000529848 NBPF3Q9H094 633 aa7.84□□□□□ -1.15
SVIP-203ENST00000529848 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
SVIP-203ENST00000529848 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
SVIP-203ENST00000529848 SWT1Q5T5J6 900 aaKnown RBP7.83□□□□□ -1.16
SVIP-203ENST00000529848 PROCA1Q8NCQ7 364 aaPredicted RBP7.83□□□□□ -1.16
SVIP-203ENST00000529848 SPIRE2Q8WWL2 714 aa7.83□□□□□ -1.16
SVIP-203ENST00000529848 PCDH10Q9P2E7 1040 aa7.83□□□□□ -1.16
SVIP-203ENST00000529848 VPS9D1Q9Y2B5 631 aa7.83□□□□□ -1.16
SVIP-203ENST00000529848 ANKRD13DQ6ZTN6 518 aa7.82□□□□□ -1.16
SVIP-203ENST00000529848 RIC3Q7Z5B4 369 aa7.82□□□□□ -1.16
SVIP-203ENST00000529848 LAPTM4BQ86VI4 370 aa7.81□□□□□ -1.16
SVIP-203ENST00000529848 SLF2Q8IX21 1173 aa7.8□□□□□ -1.16
SVIP-203ENST00000529848 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
SVIP-203ENST00000529848 ZMYND15Q9H091 742 aa7.8□□□□□ -1.16
SVIP-203ENST00000529848 TK2O00142 265 aa7.79□□□□□ -1.16
SVIP-203ENST00000529848 RNF40O75150 1001 aa7.79□□□□□ -1.16
SVIP-203ENST00000529848 KDM4AO75164 1064 aa7.79□□□□□ -1.16
SVIP-203ENST00000529848 MRPL50Q8N5N7 158 aaKnown RBP7.79□□□□□ -1.16
SVIP-203ENST00000529848 LIMD1Q9UGP4 676 aa7.79□□□□□ -1.16
SVIP-203ENST00000529848 MOXD2PA6NHM9 499 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 SPTLC1O15269 473 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 GCGRP47871 477 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 USP46P62068 366 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 RSBN1LQ6PCB5 846 aaPredicted RBP7.78□□□□□ -1.16
SVIP-203ENST00000529848 SAMD7Q7Z3H4 446 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 SPNS2Q8IVW8 549 aa7.78□□□□□ -1.16
SVIP-203ENST00000529848 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
SVIP-203ENST00000529848 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
SVIP-203ENST00000529848 STAC3Q96MF2 364 aa7.77□□□□□ -1.17
SVIP-203ENST00000529848 BHMG1C9JSJ3 638 aaPredicted RBP7.76□□□□□ -1.17
SVIP-203ENST00000529848 SUPT5HO00267 1087 aaKnown RBP7.76□□□□□ -1.17
SVIP-203ENST00000529848 SLC10A3P09131 477 aa7.76□□□□□ -1.17
SVIP-203ENST00000529848 NDUFV2P19404 249 aa7.76□□□□□ -1.17
SVIP-203ENST00000529848 GJA5P36382 358 aa7.76□□□□□ -1.17
SVIP-203ENST00000529848 RFC5P40937 340 aa7.76□□□□□ -1.17
SVIP-203ENST00000529848 ZFRQ96KR1 1074 aaKnown RBP7.76□□□□□ -1.17
SVIP-203ENST00000529848 HOXA2O43364 376 aa7.75□□□□□ -1.17
SVIP-203ENST00000529848 HRO43593 1189 aa7.75□□□□□ -1.17
SVIP-203ENST00000529848 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
SVIP-203ENST00000529848 NECTIN2Q92692 538 aa7.75□□□□□ -1.17
SVIP-203ENST00000529848 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
SVIP-203ENST00000529848 CFHP08603 1231 aa7.74□□□□□ -1.17
SVIP-203ENST00000529848 MCM6Q14566 821 aa7.74□□□□□ -1.17
SVIP-203ENST00000529848 GRIPAP1Q4V328 841 aa7.74□□□□□ -1.17
SVIP-203ENST00000529848 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
SVIP-203ENST00000529848 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
SVIP-203ENST00000529848 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
SVIP-203ENST00000529848 FDX1P10109 184 aa7.73□□□□□ -1.17
SVIP-203ENST00000529848 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
SVIP-203ENST00000529848 TMEM259Q4ZIN3 620 aa7.73□□□□□ -1.17
SVIP-203ENST00000529848 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
SVIP-203ENST00000529848 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
SVIP-203ENST00000529848 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
SVIP-203ENST00000529848 SPDYE5A6NIY4 337 aa7.72□□□□□ -1.17
SVIP-203ENST00000529848 BANK1Q8NDB2 785 aa7.72□□□□□ -1.17
SVIP-203ENST00000529848 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
SVIP-203ENST00000529848 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
SVIP-203ENST00000529848 LILRB3O75022 631 aa7.71□□□□□ -1.18
SVIP-203ENST00000529848 QPCTQ16769 361 aa7.71□□□□□ -1.18
SVIP-203ENST00000529848 PRPF38BQ5VTL8 546 aaKnown RBP7.71□□□□□ -1.18
SVIP-203ENST00000529848 ANKK1Q8NFD2 765 aa7.71□□□□□ -1.18
SVIP-203ENST00000529848 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
SVIP-203ENST00000529848 RAD21O60216 631 aa7.7□□□□□ -1.18
SVIP-203ENST00000529848 GUCA2AQ02747 115 aa7.7□□□□□ -1.18
SVIP-203ENST00000529848 FUT2Q10981 343 aa7.7□□□□□ -1.18
SVIP-203ENST00000529848 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
SVIP-203ENST00000529848 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
SVIP-203ENST00000529848 MMRN1Q13201 1228 aa7.69□□□□□ -1.18
SVIP-203ENST00000529848 FBXO31Q5XUX0 539 aaPredicted RBP7.69□□□□□ -1.18
SVIP-203ENST00000529848 HLA-CQ95604 372 aa7.69□□□□□ -1.18
SVIP-203ENST00000529848 PRR14Q9BWN1 585 aa7.69□□□□□ -1.18
SVIP-203ENST00000529848 A6NJR5 290 aa7.68□□□□□ -1.18
SVIP-203ENST00000529848 AP1G2O75843 785 aa7.68□□□□□ -1.18
SVIP-203ENST00000529848 HRCP23327 699 aa7.68□□□□□ -1.18
SVIP-203ENST00000529848 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
SVIP-203ENST00000529848 MTMR2Q13614 643 aa7.68□□□□□ -1.18
SVIP-203ENST00000529848 RTL5Q5HYW3 569 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms