RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RSPH4AQ5TD94 716 aa5.64□□□□□ -1.51
PTPRC-213ENST00000529828 C19orf67A6NJJ6 358 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 SLC26A8Q96RN1 970 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 ARHGAP23Q9P227 1491 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 STAG3Q9UJ98 1225 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 EID1Q9Y6B2 187 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 SLIT1O75093 1534 aa5.63□□□□□ -1.51
PTPRC-213ENST00000529828 ROBO1Q9Y6N7 1651 aa5.62□□□□□ -1.51
PTPRC-213ENST00000529828 MAST1Q9Y2H9 1570 aa5.62□□□□□ -1.51
PTPRC-213ENST00000529828 PIK3C2BO00750 1634 aa5.62□□□□□ -1.51
PTPRC-213ENST00000529828 EIF2AK4Q9P2K8 1649 aaKnown RBP5.62□□□□□ -1.51
PTPRC-213ENST00000529828 FAM135BQ49AJ0 1406 aa5.62□□□□□ -1.51
PTPRC-213ENST00000529828 MAP3K1Q13233 1512 aa5.62□□□□□ -1.51
PTPRC-213ENST00000529828 PROSER2Q86WR7 435 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-213ENST00000529828 TMEM2Q9UHN6 1383 aa5.61□□□□□ -1.51
PTPRC-213ENST00000529828 PRKAR2AP13861 404 aaKnown RBP5.61□□□□□ -1.51
PTPRC-213ENST00000529828 KANK4Q5T7N3 995 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-213ENST00000529828 BCANQ96GW7 911 aa5.61□□□□□ -1.51
PTPRC-213ENST00000529828 RRP7BPQ9NSQ0 103 aa5.61□□□□□ -1.51
PTPRC-213ENST00000529828 KIF15Q9NS87 1388 aa5.61□□□□□ -1.51
PTPRC-213ENST00000529828 LRRC9Q6ZRR7 1453 aa5.61□□□□□ -1.51
PTPRC-213ENST00000529828 GABBR2O75899 941 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 PRDM15P57071 1507 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-213ENST00000529828 DUOX2Q9NRD8 1548 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 SPDYE2BA6NHP3 402 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 SPDYE6P0CI01 402 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 KCNA6P17658 529 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 SPDYE2Q495Y8 402 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 SPDYE1Q8NFV5 336 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-213ENST00000529828 TRIM52Q96A61 297 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 EFCAB6Q5THR3 1501 aa5.6□□□□□ -1.51
PTPRC-213ENST00000529828 IDI1Q13907 227 aa5.59□□□□□ -1.51
PTPRC-213ENST00000529828 ARHGAP31Q2M1Z3 1444 aa5.59□□□□□ -1.51
PTPRC-213ENST00000529828 MYOM3Q5VTT5 1437 aa5.59□□□□□ -1.51
PTPRC-213ENST00000529828 CHIC2Q9UKJ5 165 aa5.59□□□□□ -1.51
PTPRC-213ENST00000529828 PHLPP1O60346 1717 aa5.59□□□□□ -1.52
PTPRC-213ENST00000529828 LRP6O75581 1613 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 ABCC5O15440 1437 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 ERBINQ96RT1 1412 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 MSH6P52701 1360 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 JCADQ9P266 1359 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 CLCN6P51797 869 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 MEX3CQ5U5Q3 659 aaKnown RBP5.58□□□□□ -1.52
PTPRC-213ENST00000529828 VPS8Q8N3P4 1428 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 SLAIN2Q9P270 581 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 TET3O43151 1660 aa5.58□□□□□ -1.52
PTPRC-213ENST00000529828 KANK1Q14678 1352 aa5.57□□□□□ -1.52
PTPRC-213ENST00000529828 UPF1Q92900 1129 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRC-213ENST00000529828 NWD1Q149M9 1564 aa5.57□□□□□ -1.52
PTPRC-213ENST00000529828 ADGRB3O60242 1522 aa5.57□□□□□ -1.52
PTPRC-213ENST00000529828 NKTRP30414 1462 aaKnown RBP5.57□□□□□ -1.52
PTPRC-213ENST00000529828 NUTM2DQ5VT03 806 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-213ENST00000529828 C14orf37Q86TY3 774 aa5.57□□□□□ -1.52
PTPRC-213ENST00000529828 CROCC2H7BZ55 1655 aa5.56□□□□□ -1.52
PTPRC-213ENST00000529828 COL16A1Q07092 1604 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-213ENST00000529828 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
PTPRC-213ENST00000529828 NUTM2BA6NNL0 878 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-213ENST00000529828 NUTM2EB1AL46 878 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-213ENST00000529828 PPP1R15AO75807 674 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-213ENST00000529828 NUTM2AQ8IVF1 878 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-213ENST00000529828 DAPK1P53355 1430 aa5.56□□□□□ -1.52
PTPRC-213ENST00000529828 PTPN23Q9H3S7 1636 aa5.55□□□□□ -1.52
PTPRC-213ENST00000529828 NOS1P29475 1434 aa5.55□□□□□ -1.52
PTPRC-213ENST00000529828 CHGAP10645 457 aaKnown RBP5.55□□□□□ -1.52
PTPRC-213ENST00000529828 LMTK2Q8IWU2 1503 aa5.55□□□□□ -1.52
PTPRC-213ENST00000529828 ZFYVE9O95405 1425 aa5.54□□□□□ -1.52
PTPRC-213ENST00000529828 RIMS2Q9UQ26 1411 aa5.54□□□□□ -1.52
PTPRC-213ENST00000529828 ZNF772Q68DY9 489 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-213ENST00000529828 KDM5AP29375 1690 aaKnown RBP5.54□□□□□ -1.52
PTPRC-213ENST00000529828 PLEKHG1Q9ULL1 1385 aa5.54□□□□□ -1.52
PTPRC-213ENST00000529828 ANKRD30AQ9BXX3 1397 aa5.54□□□□□ -1.52
PTPRC-213ENST00000529828 SPATA31A6Q5VVP1 1343 aa5.54□□□□□ -1.52
PTPRC-213ENST00000529828 EP400Q96L91 3159 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 RXRBP28702 533 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 GCC2Q8IWJ2 1684 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 AFF2P51816 1311 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 FGD6Q6ZV73 1430 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 MYO5BQ9ULV0 1848 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 ATF3P18847 181 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 FOXD4L1Q9NU39 408 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 SLC52A1Q9NWF4 448 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
PTPRC-213ENST00000529828 ATF5Q9Y2D1 282 aaPredicted RBP5.53□□□□□ -1.52
PTPRC-213ENST00000529828 AHDC1Q5TGY3 1603 aaPredicted RBP5.52□□□□□ -1.53
PTPRC-213ENST00000529828 BRINP3Q76B58 766 aa5.52□□□□□ -1.53
PTPRC-213ENST00000529828 CHD2O14647 1828 aaKnown RBP5.52□□□□□ -1.53
PTPRC-213ENST00000529828 ADAMTS13Q76LX8 1427 aa5.52□□□□□ -1.53
PTPRC-213ENST00000529828 DDX17Q92841 729 aaKnown RBP5.52□□□□□ -1.53
PTPRC-213ENST00000529828 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.52□□□□□ -1.53
PTPRC-213ENST00000529828 RGS12O14924 1447 aa5.52□□□□□ -1.53
PTPRC-213ENST00000529828 SHPRHQ149N8 1683 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 DIP2AQ14689 1571 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 FAM50AQ14320 339 aaKnown RBP5.51□□□□□ -1.53
PTPRC-213ENST00000529828 CADPS2Q86UW7 1296 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 C8orf37Q96NL8 207 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 PTPRUQ92729 1446 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 TMEM131LA2VDJ0 1609 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
PTPRC-213ENST00000529828 AMOTL2Q9Y2J4 779 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms