RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 OATP04181 439 aa8.92□□□□□ -0.98
TCN1-202ENST00000529251 TJAP1Q5JTD0 557 aa8.92□□□□□ -0.98
TCN1-202ENST00000529251 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
TCN1-202ENST00000529251 KCNC4Q03721 635 aa8.91□□□□□ -0.98
TCN1-202ENST00000529251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
TCN1-202ENST00000529251 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
TCN1-202ENST00000529251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.89□□□□□ -0.99
TCN1-202ENST00000529251 MTRQ99707 1265 aa8.89□□□□□ -0.99
TCN1-202ENST00000529251 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
TCN1-202ENST00000529251 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
TCN1-202ENST00000529251 PHOX2BQ99453 314 aa8.87□□□□□ -0.99
TCN1-202ENST00000529251 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
TCN1-202ENST00000529251 RGS20O76081 388 aa8.85□□□□□ -0.99
TCN1-202ENST00000529251 SLC10A3P09131 477 aa8.85□□□□□ -0.99
TCN1-202ENST00000529251 IL21Q9HBE4 155 aa8.85□□□□□ -0.99
TCN1-202ENST00000529251 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
TCN1-202ENST00000529251 PRR14Q9BWN1 585 aa8.84□□□□□ -0.99
TCN1-202ENST00000529251 NLRP7Q8WX94 980 aa8.83□□□□□ -1
TCN1-202ENST00000529251 CFHP08603 1231 aa8.82□□□□□ -1
TCN1-202ENST00000529251 MAP2K5Q13163 448 aa8.82□□□□□ -1
TCN1-202ENST00000529251 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
TCN1-202ENST00000529251 COPS2P61201 443 aa8.81□□□□□ -1
TCN1-202ENST00000529251 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
TCN1-202ENST00000529251 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
TCN1-202ENST00000529251 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
TCN1-202ENST00000529251 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
TCN1-202ENST00000529251 IRF6O14896 467 aa8.79□□□□□ -1
TCN1-202ENST00000529251 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
TCN1-202ENST00000529251 ZPR1O75312 459 aa8.78□□□□□ -1
TCN1-202ENST00000529251 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
TCN1-202ENST00000529251 ZC3H15Q8WU90 426 aaKnown RBP8.77□□□□□ -1.01
TCN1-202ENST00000529251 DDX11L8A8MPP1 907 aa8.75□□□□□ -1.01
TCN1-202ENST00000529251 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
TCN1-202ENST00000529251 CCDC102AQ96A19 550 aa8.75□□□□□ -1.01
TCN1-202ENST00000529251 RSPH4AQ5TD94 716 aa8.74□□□□□ -1.01
TCN1-202ENST00000529251 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
TCN1-202ENST00000529251 TLL1O43897 1013 aa8.72□□□□□ -1.01
TCN1-202ENST00000529251 ZMYND10O75800 440 aa8.72□□□□□ -1.01
TCN1-202ENST00000529251 SULF1Q8IWU6 871 aa8.72□□□□□ -1.01
TCN1-202ENST00000529251 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.72□□□□□ -1.01
TCN1-202ENST00000529251 GCGRP47871 477 aa8.71□□□□□ -1.02
TCN1-202ENST00000529251 SLC24A3Q9HC58 644 aa8.71□□□□□ -1.02
TCN1-202ENST00000529251 NR1I2O75469 434 aa8.7□□□□□ -1.02
TCN1-202ENST00000529251 MDM2Q00987 491 aaPredicted RBP8.7□□□□□ -1.02
TCN1-202ENST00000529251 FUT2Q10981 343 aa8.7□□□□□ -1.02
TCN1-202ENST00000529251 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
TCN1-202ENST00000529251 BARGINQ6ZT62 677 aa8.7□□□□□ -1.02
TCN1-202ENST00000529251 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
TCN1-202ENST00000529251 CD46P15529 392 aa8.69□□□□□ -1.02
TCN1-202ENST00000529251 MORN1Q5T089 497 aa8.69□□□□□ -1.02
TCN1-202ENST00000529251 TMUB1Q9BVT8 246 aa8.68□□□□□ -1.02
TCN1-202ENST00000529251 ADH1BP00325 375 aa8.67□□□□□ -1.02
TCN1-202ENST00000529251 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
TCN1-202ENST00000529251 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
TCN1-202ENST00000529251 GGCXP38435 758 aa8.66□□□□□ -1.02
TCN1-202ENST00000529251 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
TCN1-202ENST00000529251 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
TCN1-202ENST00000529251 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
TCN1-202ENST00000529251 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
TCN1-202ENST00000529251 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
TCN1-202ENST00000529251 S1PR4O95977 384 aa8.64□□□□□ -1.03
TCN1-202ENST00000529251 CLCN1P35523 988 aa8.64□□□□□ -1.03
TCN1-202ENST00000529251 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
TCN1-202ENST00000529251 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
TCN1-202ENST00000529251 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
TCN1-202ENST00000529251 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
TCN1-202ENST00000529251 KRI1Q8N9T8 703 aaKnown RBP8.63□□□□□ -1.03
TCN1-202ENST00000529251 SPSB2Q99619 263 aa8.63□□□□□ -1.03
TCN1-202ENST00000529251 PPEF1O14829 653 aaPredicted RBP8.61□□□□□ -1.03
TCN1-202ENST00000529251 KDM4AO75164 1064 aa8.61□□□□□ -1.03
TCN1-202ENST00000529251 AMHR2Q16671 573 aa8.61□□□□□ -1.03
TCN1-202ENST00000529251 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
TCN1-202ENST00000529251 SLC6A16Q9GZN6 736 aa8.61□□□□□ -1.03
TCN1-202ENST00000529251 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
TCN1-202ENST00000529251 FMNL1O95466 1100 aaPredicted RBP8.59□□□□□ -1.03
TCN1-202ENST00000529251 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
TCN1-202ENST00000529251 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
TCN1-202ENST00000529251 USP46P62068 366 aa8.58□□□□□ -1.04
TCN1-202ENST00000529251 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
TCN1-202ENST00000529251 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
TCN1-202ENST00000529251 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
TCN1-202ENST00000529251 HLA-CQ95604 372 aa8.57□□□□□ -1.04
TCN1-202ENST00000529251 HOXA2O43364 376 aa8.56□□□□□ -1.04
TCN1-202ENST00000529251 SLC19A1P41440 591 aa8.56□□□□□ -1.04
TCN1-202ENST00000529251 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
TCN1-202ENST00000529251 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
TCN1-202ENST00000529251 TRIM66O15016 1216 aa8.55□□□□□ -1.04
TCN1-202ENST00000529251 SSTR3P32745 418 aaPredicted RBP8.55□□□□□ -1.04
TCN1-202ENST00000529251 BRPF1P55201 1214 aaPredicted RBP8.55□□□□□ -1.04
TCN1-202ENST00000529251 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
TCN1-202ENST00000529251 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
TCN1-202ENST00000529251 Q3C1V9 767 aa8.54□□□□□ -1.04
TCN1-202ENST00000529251 MSS51Q4VC12 460 aa8.54□□□□□ -1.04
TCN1-202ENST00000529251 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
TCN1-202ENST00000529251 PARP9Q8IXQ6 854 aa8.54□□□□□ -1.04
TCN1-202ENST00000529251 AK7Q96M32 723 aa8.54□□□□□ -1.04
TCN1-202ENST00000529251 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
TCN1-202ENST00000529251 GFRA3O60609 400 aa8.53□□□□□ -1.04
TCN1-202ENST00000529251 GUCA2AQ02747 115 aa8.53□□□□□ -1.04
TCN1-202ENST00000529251 LAPTM4AQ15012 233 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms