RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TET3O43151 1660 aa11.1□□□□□ -0.63
CSTF3-208ENST00000528865 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 CEP152O94986 1710 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 SYNMO15061 1565 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 KANK1Q14678 1352 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
CSTF3-208ENST00000528865 ASXL1Q8IXJ9 1541 aa11.08□□□□□ -0.64
CSTF3-208ENST00000528865 INO80Q9ULG1 1556 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-208ENST00000528865 MYOM2P54296 1465 aa11.07□□□□□ -0.64
CSTF3-208ENST00000528865 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
CSTF3-208ENST00000528865 ANP32AP39687 249 aaKnown RBP11.07□□□□□ -0.64
CSTF3-208ENST00000528865 TRMT2AQ8IZ69 625 aaKnown RBP11.07□□□□□ -0.64
CSTF3-208ENST00000528865 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-208ENST00000528865 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
CSTF3-208ENST00000528865 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
CSTF3-208ENST00000528865 NGEFQ8N5V2 710 aa11.06□□□□□ -0.64
CSTF3-208ENST00000528865 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-208ENST00000528865 PDE4AP27815 886 aa11.05□□□□□ -0.64
CSTF3-208ENST00000528865 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
CSTF3-208ENST00000528865 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
CSTF3-208ENST00000528865 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
CSTF3-208ENST00000528865 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
CSTF3-208ENST00000528865 LMTK2Q8IWU2 1503 aa11.04□□□□□ -0.64
CSTF3-208ENST00000528865 PLEKHH1Q9ULM0 1364 aa11.04□□□□□ -0.64
CSTF3-208ENST00000528865 FANCAO15360 1455 aa11.04□□□□□ -0.64
CSTF3-208ENST00000528865 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
CSTF3-208ENST00000528865 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
CSTF3-208ENST00000528865 KIF3BO15066 747 aa11.03□□□□□ -0.64
CSTF3-208ENST00000528865 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
CSTF3-208ENST00000528865 SLFN5Q08AF3 891 aa11.03□□□□□ -0.64
CSTF3-208ENST00000528865 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSTF3-208ENST00000528865 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
CSTF3-208ENST00000528865 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.64
CSTF3-208ENST00000528865 ERVK-7P63135 1459 aa11.02□□□□□ -0.65
CSTF3-208ENST00000528865 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
CSTF3-208ENST00000528865 ADGRL1O94910 1474 aa11.01□□□□□ -0.65
CSTF3-208ENST00000528865 PLIN1O60240 522 aa11.01□□□□□ -0.65
CSTF3-208ENST00000528865 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
CSTF3-208ENST00000528865 MYOM1P52179 1685 aa11.01□□□□□ -0.65
CSTF3-208ENST00000528865 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
CSTF3-208ENST00000528865 BCL11AQ9H165 835 aa11□□□□□ -0.65
CSTF3-208ENST00000528865 ADGRF5Q8IZF2 1346 aa11□□□□□ -0.65
CSTF3-208ENST00000528865 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
CSTF3-208ENST00000528865 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-208ENST00000528865 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
CSTF3-208ENST00000528865 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-208ENST00000528865 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
CSTF3-208ENST00000528865 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
CSTF3-208ENST00000528865 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
CSTF3-208ENST00000528865 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-208ENST00000528865 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-208ENST00000528865 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
CSTF3-208ENST00000528865 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
CSTF3-208ENST00000528865 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
CSTF3-208ENST00000528865 IFT172Q9UG01 1749 aa10.98□□□□□ -0.65
CSTF3-208ENST00000528865 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
CSTF3-208ENST00000528865 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
CSTF3-208ENST00000528865 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
CSTF3-208ENST00000528865 KIF1BO60333 1816 aa10.96□□□□□ -0.65
CSTF3-208ENST00000528865 KIDINS220Q9ULH0 1771 aa10.96□□□□□ -0.65
CSTF3-208ENST00000528865 E9PSI1 815 aa10.96□□□□□ -0.65
CSTF3-208ENST00000528865 ADGRB3O60242 1522 aa10.95□□□□□ -0.66
CSTF3-208ENST00000528865 MLH3Q9UHC1 1453 aa10.95□□□□□ -0.66
CSTF3-208ENST00000528865 DEKP35659 375 aaKnown RBP10.95□□□□□ -0.66
CSTF3-208ENST00000528865 NKTRP30414 1462 aaKnown RBP10.94□□□□□ -0.66
CSTF3-208ENST00000528865 ZNF518AQ6AHZ1 1483 aa10.94□□□□□ -0.66
CSTF3-208ENST00000528865 CENPJQ9HC77 1338 aaPredicted RBP10.94□□□□□ -0.66
CSTF3-208ENST00000528865 APAF1O14727 1248 aa10.94□□□□□ -0.66
CSTF3-208ENST00000528865 PPRC1Q5VV67 1664 aaKnown RBP10.94□□□□□ -0.66
CSTF3-208ENST00000528865 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
CSTF3-208ENST00000528865 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
CSTF3-208ENST00000528865 SPINK5Q9NQ38 1064 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-208ENST00000528865 NOS1P29475 1434 aa10.92□□□□□ -0.66
CSTF3-208ENST00000528865 PDE3AQ14432 1141 aa10.92□□□□□ -0.66
CSTF3-208ENST00000528865 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
CSTF3-208ENST00000528865 NINLQ9Y2I6 1382 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 ADGRB1O14514 1584 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 CCDC146Q8IYE0 955 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 MROH2AA6NES4 1674 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 NPATQ14207 1427 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
CSTF3-208ENST00000528865 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
CSTF3-208ENST00000528865 AAMPQ13685 434 aa10.9□□□□□ -0.66
CSTF3-208ENST00000528865 CCDC27Q2M243 656 aa10.9□□□□□ -0.66
CSTF3-208ENST00000528865 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
CSTF3-208ENST00000528865 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.67
CSTF3-208ENST00000528865 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
CSTF3-208ENST00000528865 NBR1Q14596 966 aa10.89□□□□□ -0.67
CSTF3-208ENST00000528865 NPM2Q86SE8 214 aaKnown RBP10.89□□□□□ -0.67
CSTF3-208ENST00000528865 WDR63Q8IWG1 891 aa10.89□□□□□ -0.67
CSTF3-208ENST00000528865 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
CSTF3-208ENST00000528865 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
CSTF3-208ENST00000528865 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
CSTF3-208ENST00000528865 PPLO60437 1756 aa10.88□□□□□ -0.67
CSTF3-208ENST00000528865 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
CSTF3-208ENST00000528865 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
CSTF3-208ENST00000528865 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
CSTF3-208ENST00000528865 MORC1Q86VD1 984 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms