RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
PGAP2-231	ENST00000528216	GGT6	Q6P531	493 aa		13.88	□□□□□ -0.19
PGAP2-231	ENST00000528216	SCAF11	Q99590	1463 aa	Known RBP	13.88	□□□□□ -0.19
PGAP2-231	ENST00000528216	TESK2	Q96S53	571 aa		13.87	□□□□□ -0.19
PGAP2-231	ENST00000528216	POLR3GL	Q9BT43	218 aa		13.86	□□□□□ -0.19
PGAP2-231	ENST00000528216	IFT172	Q9UG01	1749 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	KDM4F	A0A1W2PPD8	638 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	NBPF1	Q3BBV0	1214 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	CCDC184	Q52MB2	194 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	PARD3	Q8TEW0	1356 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	FAM9B	Q8IZU0	186 aa		13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	ESF1	Q9H501	851 aa	Known RBP	13.85	□□□□□ -0.19
PGAP2-231	ENST00000528216	TMC1	Q8TDI8	760 aa		13.84	□□□□□ -0.19
PGAP2-231	ENST00000528216	LRPPRC	P42704	1394 aa	Known RBP	13.84	□□□□□ -0.19
PGAP2-231	ENST00000528216	ZC3H13	Q5T200	1668 aa	Known RBP	13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	SIGLEC1	Q9BZZ2	1709 aa		13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	RERE	Q9P2R6	1566 aa		13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	PLPPR3	Q6T4P5	718 aa		13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	NLRP13	Q86W25	1043 aa		13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	PNISR	Q8TF01	805 aa	Known RBP	13.83	□□□□□ -0.2
PGAP2-231	ENST00000528216	NRXN1	Q9ULB1	1477 aa		13.82	□□□□□ -0.2
PGAP2-231	ENST00000528216	SYNM	O15061	1565 aa		13.82	□□□□□ -0.2
PGAP2-231	ENST00000528216	ADGRB3	O60242	1522 aa		13.82	□□□□□ -0.2
PGAP2-231	ENST00000528216	AGL	P35573	1532 aa		13.82	□□□□□ -0.2
PGAP2-231	ENST00000528216	SETBP1	Q9Y6X0	1596 aa		13.82	□□□□□ -0.2
PGAP2-231	ENST00000528216	SMG6	Q86US8	1419 aa	Known RBP	13.81	□□□□□ -0.2
PGAP2-231	ENST00000528216	PER1	O15534	1290 aa	Predicted RBP	13.8	□□□□□ -0.2
PGAP2-231	ENST00000528216	RPGRIP1L	Q68CZ1	1315 aa		13.8	□□□□□ -0.2
PGAP2-231	ENST00000528216	DISP3	Q9P2K9	1392 aa		13.8	□□□□□ -0.2
PGAP2-231	ENST00000528216	MYO3A	Q8NEV4	1616 aa		13.79	□□□□□ -0.2
PGAP2-231	ENST00000528216	ABCC3	O15438	1527 aa		13.79	□□□□□ -0.2
PGAP2-231	ENST00000528216	NPC1L1	Q9UHC9	1359 aa		13.79	□□□□□ -0.2
PGAP2-231	ENST00000528216	SBNO2	Q9Y2G9	1366 aa		13.79	□□□□□ -0.2
PGAP2-231	ENST00000528216	ARHGAP31	Q2M1Z3	1444 aa		13.78	□□□□□ -0.2
PGAP2-231	ENST00000528216	CAMSAP1	Q5T5Y3	1602 aa		13.78	□□□□□ -0.2
PGAP2-231	ENST00000528216	PPP6R1	Q9UPN7	881 aa		13.77	□□□□□ -0.21
PGAP2-231	ENST00000528216	KDM5A	P29375	1690 aa	Known RBP	13.77	□□□□□ -0.21
PGAP2-231	ENST00000528216	NPAT	Q14207	1427 aa		13.76	□□□□□ -0.21
PGAP2-231	ENST00000528216	CEBPA	P49715	358 aa	Predicted RBP	13.76	□□□□□ -0.21
PGAP2-231	ENST00000528216	PPL	O60437	1756 aa		13.76	□□□□□ -0.21
PGAP2-231	ENST00000528216	NUDC	Q9Y266	331 aa		13.75	□□□□□ -0.21
PGAP2-231	ENST00000528216	MROH2A	A6NES4	1674 aa		13.75	□□□□□ -0.21
PGAP2-231	ENST00000528216	NOS1	P29475	1434 aa		13.75	□□□□□ -0.21
PGAP2-231	ENST00000528216	PIK3C2B	O00750	1634 aa		13.74	□□□□□ -0.21
PGAP2-231	ENST00000528216	PDE3B	Q13370	1112 aa		13.74	□□□□□ -0.21
PGAP2-231	ENST00000528216	ADAMTSL3	P82987	1691 aa		13.74	□□□□□ -0.21
PGAP2-231	ENST00000528216	PANK3	Q9H999	370 aa		13.74	□□□□□ -0.21
PGAP2-231	ENST00000528216	PPP4R2	Q9NY27	417 aa		13.72	□□□□□ -0.21
PGAP2-231	ENST00000528216	UGGT1	Q9NYU2	1555 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	ASXL1	Q8IXJ9	1541 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	ZMYM3	Q14202	1370 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	MYOM1	P52179	1685 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	PTPRM	P28827	1452 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	PIK3C2G	O75747	1445 aa		13.71	□□□□□ -0.21
PGAP2-231	ENST00000528216	RNF123	Q5XPI4	1314 aa		13.71	□□□□□ -0.22
PGAP2-231	ENST00000528216	KNSTRN	Q9Y448	316 aa		13.71	□□□□□ -0.22
PGAP2-231	ENST00000528216	RIMS1	Q86UR5	1692 aa	Known RBP	13.7	□□□□□ -0.22
PGAP2-231	ENST00000528216	ZFYVE9	O95405	1425 aa		13.7	□□□□□ -0.22
PGAP2-231	ENST00000528216	BLM	P54132	1417 aa	Predicted RBP	13.7	□□□□□ -0.22
PGAP2-231	ENST00000528216	FER1L4	A9Z1Z3	1794 aa		13.69	□□□□□ -0.22
PGAP2-231	ENST00000528216	BCAN	Q96GW7	911 aa		13.69	□□□□□ -0.22
PGAP2-231	ENST00000528216	PUS7	Q96PZ0	661 aa	Known RBP	13.69	□□□□□ -0.22
PGAP2-231	ENST00000528216	C14orf93	Q9H972	538 aa	Known RBP	13.68	□□□□□ -0.22
PGAP2-231	ENST00000528216	SLC52A1	Q9NWF4	448 aa		13.68	□□□□□ -0.22
PGAP2-231	ENST00000528216	ADGRF5	Q8IZF2	1346 aa		13.67	□□□□□ -0.22
PGAP2-231	ENST00000528216	CLTC	Q00610	1675 aa	Known RBP	13.67	□□□□□ -0.22
PGAP2-231	ENST00000528216	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.67	□□□□□ -0.22
PGAP2-231	ENST00000528216	TSHZ2	Q9NRE2	1034 aa		13.67	□□□□□ -0.22
PGAP2-231	ENST00000528216	ERVK-7	P63135	1459 aa		13.67	□□□□□ -0.22
PGAP2-231	ENST00000528216	ADGRB1	O14514	1584 aa		13.66	□□□□□ -0.22
PGAP2-231	ENST00000528216	VGF	O15240	615 aa	Predicted RBP	13.66	□□□□□ -0.22
PGAP2-231	ENST00000528216	CFAP70	Q5T0N1	1121 aa		13.66	□□□□□ -0.22
PGAP2-231	ENST00000528216	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.64	□□□□□ -0.23
PGAP2-231	ENST00000528216	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.64	□□□□□ -0.23
PGAP2-231	ENST00000528216	NEXMIF	Q5QGS0	1516 aa		13.64	□□□□□ -0.23
PGAP2-231	ENST00000528216	PREX1	Q8TCU6	1659 aa		13.63	□□□□□ -0.23
PGAP2-231	ENST00000528216	QRICH2	Q9H0J4	1663 aa		13.62	□□□□□ -0.23
PGAP2-231	ENST00000528216	CC2D1B	Q5T0F9	858 aa	Known RBP	13.62	□□□□□ -0.23
PGAP2-231	ENST00000528216	NGEF	Q8N5V2	710 aa		13.62	□□□□□ -0.23
PGAP2-231	ENST00000528216	USP32	Q8NFA0	1604 aa		13.62	□□□□□ -0.23
PGAP2-231	ENST00000528216	CNGB1	Q14028	1251 aa	Predicted RBP	13.61	□□□□□ -0.23
PGAP2-231	ENST00000528216	C3	P01024	1663 aa		13.6	□□□□□ -0.23
PGAP2-231	ENST00000528216	PPP2R1A	P30153	589 aa		13.6	□□□□□ -0.23
PGAP2-231	ENST00000528216	CHGA	P10645	457 aa	Known RBP	13.6	□□□□□ -0.23
PGAP2-231	ENST00000528216	CFAP65	Q6ZU64	1925 aa	Known RBP	13.59	□□□□□ -0.23
PGAP2-231	ENST00000528216	TMEM131L	A2VDJ0	1609 aa		13.59	□□□□□ -0.23
PGAP2-231	ENST00000528216	NINL	Q9Y2I6	1382 aa		13.58	□□□□□ -0.23
PGAP2-231	ENST00000528216	TNR	Q92752	1358 aa		13.58	□□□□□ -0.24
PGAP2-231	ENST00000528216	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.58	□□□□□ -0.24
PGAP2-231	ENST00000528216	WDR43	Q15061	677 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PGAP2-231	ENST00000528216	ILDR1	Q86SU0	546 aa	Predicted RBP	13.57	□□□□□ -0.24
PGAP2-231	ENST00000528216	MYT1	Q01538	1121 aa		13.56	□□□□□ -0.24
PGAP2-231	ENST00000528216	NSD2	O96028	1365 aa		13.56	□□□□□ -0.24
PGAP2-231	ENST00000528216	EVC2	Q86UK5	1308 aa		13.55	□□□□□ -0.24
PGAP2-231	ENST00000528216	HSPA2	P54652	639 aa		13.54	□□□□□ -0.24
PGAP2-231	ENST00000528216	IRX6	P78412	446 aa	Predicted RBP	13.54	□□□□□ -0.24
PGAP2-231	ENST00000528216	RCAN3	Q9UKA8	241 aa		13.54	□□□□□ -0.24
PGAP2-231	ENST00000528216	SPATA31D1	Q6ZQQ2	1576 aa		13.53	□□□□□ -0.24
PGAP2-231	ENST00000528216	POLR3A	O14802	1390 aa	Predicted RBP	13.53	□□□□□ -0.24
PGAP2-231	ENST00000528216	IDI1	Q13907	227 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms