RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 APLP2Q06481 763 aa15.54■□□□□ 0.08
CAPN1-210ENST00000527699 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
CAPN1-210ENST00000527699 UBR1Q8IWV7 1749 aa15.54■□□□□ 0.08
CAPN1-210ENST00000527699 YY1P25490 414 aa15.53■□□□□ 0.08
CAPN1-210ENST00000527699 KIF15Q9NS87 1388 aa15.52■□□□□ 0.08
CAPN1-210ENST00000527699 ABCC5O15440 1437 aa15.51■□□□□ 0.07
CAPN1-210ENST00000527699 LRP5O75197 1615 aa15.51■□□□□ 0.07
CAPN1-210ENST00000527699 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-210ENST00000527699 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
CAPN1-210ENST00000527699 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
CAPN1-210ENST00000527699 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
CAPN1-210ENST00000527699 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
CAPN1-210ENST00000527699 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
CAPN1-210ENST00000527699 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
CAPN1-210ENST00000527699 CCDC125Q86Z20 511 aa15.48■□□□□ 0.07
CAPN1-210ENST00000527699 DAPK1P53355 1430 aa15.47■□□□□ 0.07
CAPN1-210ENST00000527699 BCANQ96GW7 911 aa15.47■□□□□ 0.07
CAPN1-210ENST00000527699 SLIT1O75093 1534 aa15.46■□□□□ 0.07
CAPN1-210ENST00000527699 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
CAPN1-210ENST00000527699 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.06
CAPN1-210ENST00000527699 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.06
CAPN1-210ENST00000527699 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
CAPN1-210ENST00000527699 FAM50AQ14320 339 aaKnown RBP15.45■□□□□ 0.06
CAPN1-210ENST00000527699 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
CAPN1-210ENST00000527699 KANK1Q14678 1352 aa15.44■□□□□ 0.06
CAPN1-210ENST00000527699 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
CAPN1-210ENST00000527699 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
CAPN1-210ENST00000527699 IDI1Q13907 227 aa15.43■□□□□ 0.06
CAPN1-210ENST00000527699 EP400Q96L91 3159 aa15.42■□□□□ 0.06
CAPN1-210ENST00000527699 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
CAPN1-210ENST00000527699 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-210ENST00000527699 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
CAPN1-210ENST00000527699 ADAMTS2O95450 1211 aa15.4■□□□□ 0.06
CAPN1-210ENST00000527699 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
CAPN1-210ENST00000527699 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
CAPN1-210ENST00000527699 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
CAPN1-210ENST00000527699 ATF3P18847 181 aa15.39■□□□□ 0.05
CAPN1-210ENST00000527699 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
CAPN1-210ENST00000527699 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
CAPN1-210ENST00000527699 DEFB132Q7Z7B7 95 aa15.38■□□□□ 0.05
CAPN1-210ENST00000527699 USP21Q9UK80 565 aa15.37■□□□□ 0.05
CAPN1-210ENST00000527699 TRPC5Q9UL62 973 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-210ENST00000527699 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
CAPN1-210ENST00000527699 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
CAPN1-210ENST00000527699 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
CAPN1-210ENST00000527699 EFCAB6Q5THR3 1501 aa15.35■□□□□ 0.05
CAPN1-210ENST00000527699 HRCP23327 699 aa15.34■□□□□ 0.05
CAPN1-210ENST00000527699 BRINP3Q76B58 766 aa15.34■□□□□ 0.05
CAPN1-210ENST00000527699 NHSL1Q5SYE7 1610 aa15.33■□□□□ 0.04
CAPN1-210ENST00000527699 ITGAEP38570 1179 aa15.33■□□□□ 0.04
CAPN1-210ENST00000527699 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
CAPN1-210ENST00000527699 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-210ENST00000527699 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-210ENST00000527699 TET3O43151 1660 aa15.32■□□□□ 0.04
CAPN1-210ENST00000527699 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-210ENST00000527699 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
CAPN1-210ENST00000527699 NOS1P29475 1434 aa15.3■□□□□ 0.04
CAPN1-210ENST00000527699 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
CAPN1-210ENST00000527699 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
CAPN1-210ENST00000527699 C19orf44Q9H6X5 657 aa15.29■□□□□ 0.04
CAPN1-210ENST00000527699 CHD2O14647 1828 aaKnown RBP15.29■□□□□ 0.04
CAPN1-210ENST00000527699 ANKRD50Q9ULJ7 1429 aa15.28■□□□□ 0.04
CAPN1-210ENST00000527699 PNPLA6Q8IY17 1366 aa15.28■□□□□ 0.04
CAPN1-210ENST00000527699 ADGRL2O95490 1459 aa15.27■□□□□ 0.03
CAPN1-210ENST00000527699 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 ATRNO75882 1429 aa15.26■□□□□ 0.03
CAPN1-210ENST00000527699 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
CAPN1-210ENST00000527699 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
CAPN1-210ENST00000527699 GCC2Q8IWJ2 1684 aa15.24■□□□□ 0.03
CAPN1-210ENST00000527699 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
CAPN1-210ENST00000527699 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.02
CAPN1-210ENST00000527699 R3HDM1Q15032 1099 aaKnown RBP15.2■□□□□ 0.02
CAPN1-210ENST00000527699 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
CAPN1-210ENST00000527699 TMEM131LA2VDJ0 1609 aa15.19■□□□□ 0.02
CAPN1-210ENST00000527699 BAG6P46379 1132 aa15.19■□□□□ 0.02
CAPN1-210ENST00000527699 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
CAPN1-210ENST00000527699 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-210ENST00000527699 GJD4Q96KN9 370 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-210ENST00000527699 NUP155O75694 1391 aa15.18■□□□□ 0.02
CAPN1-210ENST00000527699 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
CAPN1-210ENST00000527699 E9PCH4 1651 aa15.18■□□□□ 0.02
CAPN1-210ENST00000527699 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
CAPN1-210ENST00000527699 UNC13BO14795 1591 aa15.16■□□□□ 0.02
CAPN1-210ENST00000527699 TBX22Q9Y458 520 aa15.16■□□□□ 0.02
CAPN1-210ENST00000527699 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
CAPN1-210ENST00000527699 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
CAPN1-210ENST00000527699 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
CAPN1-210ENST00000527699 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
CAPN1-210ENST00000527699 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
CAPN1-210ENST00000527699 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-210ENST00000527699 AMOTL2Q9Y2J4 779 aa15.14■□□□□ 0.01
CAPN1-210ENST00000527699 MST1RQ04912 1400 aa15.12■□□□□ 0.01
CAPN1-210ENST00000527699 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
CAPN1-210ENST00000527699 PPP1R1BQ9UD71 204 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-210ENST00000527699 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
CAPN1-210ENST00000527699 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms