RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 DPYSL4O14531 572 aa9.43□□□□□ -0.9
LINC01001-202ENST00000527683 EVI5O60447 810 aa9.43□□□□□ -0.9
LINC01001-202ENST00000527683 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
LINC01001-202ENST00000527683 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
LINC01001-202ENST00000527683 ARAP3Q8WWN8 1544 aa9.42□□□□□ -0.9
LINC01001-202ENST00000527683 TBC1D12O60347 775 aa9.42□□□□□ -0.9
LINC01001-202ENST00000527683 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.9
LINC01001-202ENST00000527683 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
LINC01001-202ENST00000527683 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
LINC01001-202ENST00000527683 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
LINC01001-202ENST00000527683 FOSBP53539 338 aa9.38□□□□□ -0.91
LINC01001-202ENST00000527683 PTPRMP28827 1452 aa9.38□□□□□ -0.91
LINC01001-202ENST00000527683 PSEN2P49810 448 aa9.37□□□□□ -0.91
LINC01001-202ENST00000527683 E2F4Q16254 413 aa9.37□□□□□ -0.91
LINC01001-202ENST00000527683 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
LINC01001-202ENST00000527683 HSPA2P54652 639 aa9.35□□□□□ -0.91
LINC01001-202ENST00000527683 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
LINC01001-202ENST00000527683 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
LINC01001-202ENST00000527683 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
LINC01001-202ENST00000527683 NEO1Q92859 1461 aa9.34□□□□□ -0.91
LINC01001-202ENST00000527683 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
LINC01001-202ENST00000527683 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
LINC01001-202ENST00000527683 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
LINC01001-202ENST00000527683 CFAP43Q8NDM7 1665 aa9.33□□□□□ -0.92
LINC01001-202ENST00000527683 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
LINC01001-202ENST00000527683 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC01001-202ENST00000527683 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
LINC01001-202ENST00000527683 EEA1Q15075 1411 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 AKNAQ7Z591 1439 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
LINC01001-202ENST00000527683 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 MLECQ14165 292 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 PDIA6Q15084 440 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
LINC01001-202ENST00000527683 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
LINC01001-202ENST00000527683 DENND4BO75064 1496 aaPredicted RBP9.3□□□□□ -0.92
LINC01001-202ENST00000527683 PBX2P40425 430 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 PTGER2P43116 358 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 DDX12PQ92771 950 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 ABCA9Q8IUA7 1624 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
LINC01001-202ENST00000527683 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
LINC01001-202ENST00000527683 KIF21BO75037 1637 aa9.28□□□□□ -0.92
LINC01001-202ENST00000527683 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
LINC01001-202ENST00000527683 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
LINC01001-202ENST00000527683 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
LINC01001-202ENST00000527683 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.93
LINC01001-202ENST00000527683 ZDHHC16Q969W1 377 aa9.27□□□□□ -0.93
LINC01001-202ENST00000527683 YEATS2Q9ULM3 1422 aa9.27□□□□□ -0.93
LINC01001-202ENST00000527683 SCAPERQ9BY12 1400 aa9.26□□□□□ -0.93
LINC01001-202ENST00000527683 PHF14O94880 888 aa9.26□□□□□ -0.93
LINC01001-202ENST00000527683 COL9A1P20849 921 aa9.26□□□□□ -0.93
LINC01001-202ENST00000527683 AFAP1Q8N556 730 aa9.26□□□□□ -0.93
LINC01001-202ENST00000527683 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
LINC01001-202ENST00000527683 FANCAO15360 1455 aa9.26□□□□□ -0.93
LINC01001-202ENST00000527683 PLCH2O75038 1416 aa9.25□□□□□ -0.93
LINC01001-202ENST00000527683 POGZQ7Z3K3 1410 aa9.25□□□□□ -0.93
LINC01001-202ENST00000527683 HRO43593 1189 aa9.25□□□□□ -0.93
LINC01001-202ENST00000527683 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
LINC01001-202ENST00000527683 CTTNBP2Q8WZ74 1663 aa9.24□□□□□ -0.93
LINC01001-202ENST00000527683 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
LINC01001-202ENST00000527683 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
LINC01001-202ENST00000527683 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
LINC01001-202ENST00000527683 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
LINC01001-202ENST00000527683 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
LINC01001-202ENST00000527683 UBTFP17480 764 aaKnown RBP9.23□□□□□ -0.93
LINC01001-202ENST00000527683 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
LINC01001-202ENST00000527683 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
LINC01001-202ENST00000527683 RAPGEF6Q8TEU7 1601 aa9.23□□□□□ -0.93
LINC01001-202ENST00000527683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.22□□□□□ -0.93
LINC01001-202ENST00000527683 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
LINC01001-202ENST00000527683 VPS9D1Q9Y2B5 631 aa9.22□□□□□ -0.93
LINC01001-202ENST00000527683 OSBPP22059 807 aa9.21□□□□□ -0.94
LINC01001-202ENST00000527683 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
LINC01001-202ENST00000527683 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
LINC01001-202ENST00000527683 RBM33Q96EV2 1170 aaKnown RBP9.21□□□□□ -0.94
LINC01001-202ENST00000527683 BCORL1Q5H9F3 1711 aa9.21□□□□□ -0.94
LINC01001-202ENST00000527683 ATP10AO60312 1499 aa9.21□□□□□ -0.94
LINC01001-202ENST00000527683 MADDQ8WXG6 1647 aa9.2□□□□□ -0.94
LINC01001-202ENST00000527683 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
LINC01001-202ENST00000527683 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
LINC01001-202ENST00000527683 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 TK2O00142 265 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 PTPREP23469 700 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 NBR1Q14596 966 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 PROX2Q3B8N5 592 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 ILDR2Q71H61 639 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 EPAS1Q99814 870 aa9.19□□□□□ -0.94
LINC01001-202ENST00000527683 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
LINC01001-202ENST00000527683 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
LINC01001-202ENST00000527683 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
LINC01001-202ENST00000527683 ZFYVE16Q7Z3T8 1539 aa9.17□□□□□ -0.94
LINC01001-202ENST00000527683 ARHGEF40Q8TER5 1519 aa9.17□□□□□ -0.94
LINC01001-202ENST00000527683 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
LINC01001-202ENST00000527683 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms