RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 SATB1Q01826 763 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 FEZ1Q99689 392 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
AP001993.1-201ENST00000527317 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
AP001993.1-201ENST00000527317 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
AP001993.1-201ENST00000527317 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
AP001993.1-201ENST00000527317 CCDC172P0C7W6 258 aa13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 GTF2A1P52655 376 aaPredicted RBP13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 HMGN5P82970 282 aaKnown RBP13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 MPNDQ8N594 471 aa13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 CRBNQ96SW2 442 aa13.68□□□□□ -0.22
AP001993.1-201ENST00000527317 KIF21BO75037 1637 aa13.67□□□□□ -0.22
AP001993.1-201ENST00000527317 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
AP001993.1-201ENST00000527317 SENP3-EIF4A1A0A087X0R7 540 aa13.67□□□□□ -0.22
AP001993.1-201ENST00000527317 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
AP001993.1-201ENST00000527317 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
AP001993.1-201ENST00000527317 RNF217Q8TC41 542 aa13.66□□□□□ -0.22
AP001993.1-201ENST00000527317 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
AP001993.1-201ENST00000527317 STK26Q9P289 416 aa13.66□□□□□ -0.22
AP001993.1-201ENST00000527317 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
AP001993.1-201ENST00000527317 GOLIM4O00461 696 aa13.65□□□□□ -0.22
AP001993.1-201ENST00000527317 TERF2Q15554 542 aa13.65□□□□□ -0.22
AP001993.1-201ENST00000527317 KANK4Q5T7N3 995 aaPredicted RBP13.65□□□□□ -0.22
AP001993.1-201ENST00000527317 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
AP001993.1-201ENST00000527317 SEC24BO95487 1268 aa13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 UPF2Q9HAU5 1272 aaKnown RBP13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 RSPH14Q9UHP6 348 aa13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 MAP2K1Q02750 393 aaPredicted RBP13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
AP001993.1-201ENST00000527317 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
AP001993.1-201ENST00000527317 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
AP001993.1-201ENST00000527317 ANKRD7Q92527 254 aa13.63□□□□□ -0.23
AP001993.1-201ENST00000527317 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
AP001993.1-201ENST00000527317 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
AP001993.1-201ENST00000527317 PLIN1O60240 522 aa13.62□□□□□ -0.23
AP001993.1-201ENST00000527317 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
AP001993.1-201ENST00000527317 ICE2Q659A1 982 aa13.62□□□□□ -0.23
AP001993.1-201ENST00000527317 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
AP001993.1-201ENST00000527317 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
AP001993.1-201ENST00000527317 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
AP001993.1-201ENST00000527317 CCDC7Q96M83 1385 aa13.6□□□□□ -0.23
AP001993.1-201ENST00000527317 CTR9Q6PD62 1173 aa13.6□□□□□ -0.23
AP001993.1-201ENST00000527317 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 SGSM3Q96HU1 749 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 ERICH4A6NGS2 130 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 ABCA5Q8WWZ7 1642 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
AP001993.1-201ENST00000527317 GUCY2CP25092 1073 aa13.58□□□□□ -0.23
AP001993.1-201ENST00000527317 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.23
AP001993.1-201ENST00000527317 CDCA8Q53HL2 280 aa13.58□□□□□ -0.23
AP001993.1-201ENST00000527317 DONSONQ9NYP3 566 aa13.58□□□□□ -0.23
AP001993.1-201ENST00000527317 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.23
AP001993.1-201ENST00000527317 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
AP001993.1-201ENST00000527317 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
AP001993.1-201ENST00000527317 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
AP001993.1-201ENST00000527317 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 PSMD1Q99460 953 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 RASSF4Q9H2L5 321 aa13.56□□□□□ -0.24
AP001993.1-201ENST00000527317 SETQ01105 290 aaPredicted RBP13.55□□□□□ -0.24
AP001993.1-201ENST00000527317 PRDM16Q9HAZ2 1276 aa13.55□□□□□ -0.24
AP001993.1-201ENST00000527317 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
AP001993.1-201ENST00000527317 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
AP001993.1-201ENST00000527317 TTC36A6NLP5 189 aa13.54□□□□□ -0.24
AP001993.1-201ENST00000527317 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
AP001993.1-201ENST00000527317 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
AP001993.1-201ENST00000527317 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
AP001993.1-201ENST00000527317 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
AP001993.1-201ENST00000527317 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
AP001993.1-201ENST00000527317 TNPO1Q92973 898 aaKnown RBP13.53□□□□□ -0.24
AP001993.1-201ENST00000527317 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
AP001993.1-201ENST00000527317 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.24
AP001993.1-201ENST00000527317 GBP4Q96PP9 640 aa13.52□□□□□ -0.24
AP001993.1-201ENST00000527317 RAD50Q92878 1312 aa13.52□□□□□ -0.25
AP001993.1-201ENST00000527317 KIF1CO43896 1103 aaKnown RBP13.52□□□□□ -0.25
AP001993.1-201ENST00000527317 DDIT3P35638 169 aa13.52□□□□□ -0.25
AP001993.1-201ENST00000527317 ZNF445P59923 1031 aa13.52□□□□□ -0.25
AP001993.1-201ENST00000527317 LRPPRCP42704 1394 aaKnown RBP13.52□□□□□ -0.25
AP001993.1-201ENST00000527317 CCDC189A1A4V9 331 aa13.51□□□□□ -0.25
AP001993.1-201ENST00000527317 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
AP001993.1-201ENST00000527317 TOMM22Q9NS69 142 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms