RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DNAJB2P25686 324 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 PRR20EP86478 221 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 PRR20CP86479 221 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 PRR20DP86480 221 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 PRR20BP86481 221 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 PRR20AP86496 221 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
CLNS1A-209ENST00000527299 TLL1O43897 1013 aa8.38□□□□□ -1.07
CLNS1A-209ENST00000527299 DGAT1O75907 488 aa8.38□□□□□ -1.07
CLNS1A-209ENST00000527299 MYT1Q01538 1121 aa8.38□□□□□ -1.07
CLNS1A-209ENST00000527299 TMEM134Q9H6X4 195 aa8.38□□□□□ -1.07
CLNS1A-209ENST00000527299 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-209ENST00000527299 PTGDRQ13258 359 aa8.37□□□□□ -1.07
CLNS1A-209ENST00000527299 PKDCCQ504Y2 493 aa8.37□□□□□ -1.07
CLNS1A-209ENST00000527299 PPEF1O14829 653 aaPredicted RBP8.36□□□□□ -1.07
CLNS1A-209ENST00000527299 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
CLNS1A-209ENST00000527299 RBM46Q8TBY0 533 aaKnown RBP8.36□□□□□ -1.07
CLNS1A-209ENST00000527299 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
CLNS1A-209ENST00000527299 LIAT1Q6ZQX7 453 aa8.35□□□□□ -1.07
CLNS1A-209ENST00000527299 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
CLNS1A-209ENST00000527299 GDF9O60383 454 aa8.34□□□□□ -1.07
CLNS1A-209ENST00000527299 S1PR4O95977 384 aa8.34□□□□□ -1.07
CLNS1A-209ENST00000527299 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
CLNS1A-209ENST00000527299 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
CLNS1A-209ENST00000527299 POTECB2RU33 542 aa8.33□□□□□ -1.08
CLNS1A-209ENST00000527299 ZNF697Q5TEC3 545 aa8.33□□□□□ -1.08
CLNS1A-209ENST00000527299 ADH1BP00325 375 aa8.32□□□□□ -1.08
CLNS1A-209ENST00000527299 CFHP08603 1231 aa8.32□□□□□ -1.08
CLNS1A-209ENST00000527299 SLC10A3P09131 477 aa8.31□□□□□ -1.08
CLNS1A-209ENST00000527299 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 NR1I2O75469 434 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 SLC6A16Q9GZN6 736 aa8.29□□□□□ -1.08
CLNS1A-209ENST00000527299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
CLNS1A-209ENST00000527299 SCUBE3Q8IX30 993 aa8.27□□□□□ -1.09
CLNS1A-209ENST00000527299 KCNV2Q8TDN2 545 aa8.26□□□□□ -1.09
CLNS1A-209ENST00000527299 AAASQ9NRG9 546 aa8.26□□□□□ -1.09
CLNS1A-209ENST00000527299 NUTM2FA1L443 756 aa8.25□□□□□ -1.09
CLNS1A-209ENST00000527299 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
CLNS1A-209ENST00000527299 ST8SIA5O15466 376 aa8.24□□□□□ -1.09
CLNS1A-209ENST00000527299 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
CLNS1A-209ENST00000527299 PKD2L1Q9P0L9 805 aa8.24□□□□□ -1.09
CLNS1A-209ENST00000527299 FCHSD2O94868 740 aa8.23□□□□□ -1.09
CLNS1A-209ENST00000527299 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
CLNS1A-209ENST00000527299 SPSB2Q99619 263 aa8.23□□□□□ -1.09
CLNS1A-209ENST00000527299 OATP04181 439 aa8.22□□□□□ -1.09
CLNS1A-209ENST00000527299 AMER1Q5JTC6 1135 aaPredicted RBP8.22□□□□□ -1.09
CLNS1A-209ENST00000527299 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
CLNS1A-209ENST00000527299 PUS10Q3MIT2 529 aaKnown RBP8.21□□□□□ -1.1
CLNS1A-209ENST00000527299 CRIPAKQ8N1N5 446 aa8.21□□□□□ -1.1
CLNS1A-209ENST00000527299 RPIAP49247 311 aa8.2□□□□□ -1.1
CLNS1A-209ENST00000527299 RSPH4AQ5TD94 716 aa8.2□□□□□ -1.1
CLNS1A-209ENST00000527299 AVPP01185 164 aa8.19□□□□□ -1.1
CLNS1A-209ENST00000527299 FOXC1Q12948 553 aa8.19□□□□□ -1.1
CLNS1A-209ENST00000527299 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
CLNS1A-209ENST00000527299 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
CLNS1A-209ENST00000527299 TOR4AQ9NXH8 423 aa8.18□□□□□ -1.1
CLNS1A-209ENST00000527299 THAP11Q96EK4 314 aa8.17□□□□□ -1.1
CLNS1A-209ENST00000527299 DACH1Q9UI36 760 aa8.17□□□□□ -1.1
CLNS1A-209ENST00000527299 MORN1Q5T089 497 aa8.16□□□□□ -1.1
CLNS1A-209ENST00000527299 CD2BP2O95400 341 aaKnown RBP8.15□□□□□ -1.1
CLNS1A-209ENST00000527299 HIC1Q14526 733 aa8.15□□□□□ -1.1
CLNS1A-209ENST00000527299 RTN4Q9NQC3 1192 aaKnown RBP8.15□□□□□ -1.1
CLNS1A-209ENST00000527299 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.1
CLNS1A-209ENST00000527299 SEMA3EO15041 775 aa8.14□□□□□ -1.11
CLNS1A-209ENST00000527299 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
CLNS1A-209ENST00000527299 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
CLNS1A-209ENST00000527299 DAXXQ9UER7 740 aaPredicted RBP8.14□□□□□ -1.11
CLNS1A-209ENST00000527299 FUT2Q10981 343 aa8.13□□□□□ -1.11
CLNS1A-209ENST00000527299 CTC1Q2NKJ3 1217 aa8.13□□□□□ -1.11
CLNS1A-209ENST00000527299 CYP4X1Q8N118 509 aa8.13□□□□□ -1.11
CLNS1A-209ENST00000527299 AXIN1O15169 862 aa8.12□□□□□ -1.11
CLNS1A-209ENST00000527299 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
CLNS1A-209ENST00000527299 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
CLNS1A-209ENST00000527299 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
CLNS1A-209ENST00000527299 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
CLNS1A-209ENST00000527299 WFS1O76024 890 aa8.11□□□□□ -1.11
CLNS1A-209ENST00000527299 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
CLNS1A-209ENST00000527299 P3H3Q8IVL6 736 aa8.11□□□□□ -1.11
CLNS1A-209ENST00000527299 RDH13Q8NBN7 331 aa8.11□□□□□ -1.11
CLNS1A-209ENST00000527299 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-209ENST00000527299 GNPATO15228 680 aa8.09□□□□□ -1.11
CLNS1A-209ENST00000527299 FECHP22830 423 aa8.09□□□□□ -1.11
CLNS1A-209ENST00000527299 GCGRP47871 477 aa8.09□□□□□ -1.11
CLNS1A-209ENST00000527299 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
CLNS1A-209ENST00000527299 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
CLNS1A-209ENST00000527299 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
CLNS1A-209ENST00000527299 MSS51Q4VC12 460 aa8.08□□□□□ -1.12
CLNS1A-209ENST00000527299 PRDM9Q9NQV7 894 aa8.08□□□□□ -1.12
CLNS1A-209ENST00000527299 GPR37O15354 613 aa8.07□□□□□ -1.12
CLNS1A-209ENST00000527299 RBM26Q5T8P6 1007 aaKnown RBP8.07□□□□□ -1.12
CLNS1A-209ENST00000527299 TTC24A2A3L6 582 aaPredicted RBP8.06□□□□□ -1.12
CLNS1A-209ENST00000527299 ZBTB24O43167 697 aaPredicted RBP8.06□□□□□ -1.12
CLNS1A-209ENST00000527299 WIPF1O43516 503 aa8.06□□□□□ -1.12
CLNS1A-209ENST00000527299 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
CLNS1A-209ENST00000527299 TESPA1A2RU30 521 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms