RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
SCN3B-203ENST00000527125 GSE1Q14687 1217 aa12.25□□□□□ -0.45
SCN3B-203ENST00000527125 CLTCL1P53675 1640 aa12.25□□□□□ -0.45
SCN3B-203ENST00000527125 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
SCN3B-203ENST00000527125 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
SCN3B-203ENST00000527125 PLIN1O60240 522 aa12.24□□□□□ -0.45
SCN3B-203ENST00000527125 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
SCN3B-203ENST00000527125 USP32Q8NFA0 1604 aa12.23□□□□□ -0.45
SCN3B-203ENST00000527125 PTPRTO14522 1441 aa12.23□□□□□ -0.45
SCN3B-203ENST00000527125 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
SCN3B-203ENST00000527125 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
SCN3B-203ENST00000527125 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
SCN3B-203ENST00000527125 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
SCN3B-203ENST00000527125 TET3O43151 1660 aa12.22□□□□□ -0.45
SCN3B-203ENST00000527125 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
SCN3B-203ENST00000527125 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
SCN3B-203ENST00000527125 INO80Q9ULG1 1556 aaPredicted RBP12.21□□□□□ -0.46
SCN3B-203ENST00000527125 PANK3Q9H999 370 aa12.21□□□□□ -0.46
SCN3B-203ENST00000527125 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
SCN3B-203ENST00000527125 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
SCN3B-203ENST00000527125 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
SCN3B-203ENST00000527125 ABCC1P33527 1531 aa12.2□□□□□ -0.46
SCN3B-203ENST00000527125 NKTRP30414 1462 aaKnown RBP12.2□□□□□ -0.46
SCN3B-203ENST00000527125 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
SCN3B-203ENST00000527125 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
SCN3B-203ENST00000527125 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
SCN3B-203ENST00000527125 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
SCN3B-203ENST00000527125 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
SCN3B-203ENST00000527125 BRPF3Q9ULD4 1205 aa12.19□□□□□ -0.46
SCN3B-203ENST00000527125 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
SCN3B-203ENST00000527125 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
SCN3B-203ENST00000527125 MROH1Q8NDA8 1641 aa12.18□□□□□ -0.46
SCN3B-203ENST00000527125 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
SCN3B-203ENST00000527125 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
SCN3B-203ENST00000527125 POLR3GLQ9BT43 218 aa12.17□□□□□ -0.46
SCN3B-203ENST00000527125 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
SCN3B-203ENST00000527125 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
SCN3B-203ENST00000527125 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCN3B-203ENST00000527125 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
SCN3B-203ENST00000527125 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
SCN3B-203ENST00000527125 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
SCN3B-203ENST00000527125 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
SCN3B-203ENST00000527125 MYOM2P54296 1465 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 RTEL1-TNFRSF6BF6WH68 1400 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.46
SCN3B-203ENST00000527125 PPRC1Q5VV67 1664 aaKnown RBP12.14□□□□□ -0.47
SCN3B-203ENST00000527125 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
SCN3B-203ENST00000527125 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
SCN3B-203ENST00000527125 CHD1O14646 1710 aa12.14□□□□□ -0.47
SCN3B-203ENST00000527125 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
SCN3B-203ENST00000527125 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
SCN3B-203ENST00000527125 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
SCN3B-203ENST00000527125 ARHGAP5Q13017 1502 aa12.13□□□□□ -0.47
SCN3B-203ENST00000527125 TMF1P82094 1093 aa12.13□□□□□ -0.47
SCN3B-203ENST00000527125 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
SCN3B-203ENST00000527125 CC2D1BQ5T0F9 858 aaKnown RBP12.13□□□□□ -0.47
SCN3B-203ENST00000527125 KCNA4P22459 653 aa12.12□□□□□ -0.47
SCN3B-203ENST00000527125 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
SCN3B-203ENST00000527125 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
SCN3B-203ENST00000527125 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
SCN3B-203ENST00000527125 KIF1BO60333 1816 aa12.11□□□□□ -0.47
SCN3B-203ENST00000527125 GOLGA2Q08379 1002 aa12.11□□□□□ -0.47
SCN3B-203ENST00000527125 KANK1Q14678 1352 aa12.11□□□□□ -0.47
SCN3B-203ENST00000527125 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
SCN3B-203ENST00000527125 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
SCN3B-203ENST00000527125 IGHDP01880 384 aa12.1□□□□□ -0.47
SCN3B-203ENST00000527125 PPLO60437 1756 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
SCN3B-203ENST00000527125 SBNO2Q9Y2G9 1366 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
SCN3B-203ENST00000527125 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
SCN3B-203ENST00000527125 PLCH2O75038 1416 aa12.08□□□□□ -0.48
SCN3B-203ENST00000527125 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
SCN3B-203ENST00000527125 PDE3AQ14432 1141 aa12.08□□□□□ -0.48
SCN3B-203ENST00000527125 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
SCN3B-203ENST00000527125 SEC24BO95487 1268 aa12.07□□□□□ -0.48
SCN3B-203ENST00000527125 UHRF1BP1LA0JNW5 1464 aa12.06□□□□□ -0.48
SCN3B-203ENST00000527125 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 ANKRD26Q9UPS8 1709 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 NCOA3Q9Y6Q9 1424 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 ADGRB1O14514 1584 aa12.05□□□□□ -0.48
SCN3B-203ENST00000527125 ADGRB3O60242 1522 aa12.04□□□□□ -0.48
SCN3B-203ENST00000527125 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
SCN3B-203ENST00000527125 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
SCN3B-203ENST00000527125 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
SCN3B-203ENST00000527125 ADGRL1O94910 1474 aa12.04□□□□□ -0.48
SCN3B-203ENST00000527125 E9PSI1 815 aa12.04□□□□□ -0.48
SCN3B-203ENST00000527125 BCAR3O75815 825 aa12.04□□□□□ -0.48
SCN3B-203ENST00000527125 AAMPQ13685 434 aa12.03□□□□□ -0.48
SCN3B-203ENST00000527125 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
SCN3B-203ENST00000527125 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms