RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
LRRK1-205ENST00000526457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
LRRK1-205ENST00000526457 CUX1P39880 1505 aa9.33□□□□□ -0.92
LRRK1-205ENST00000526457 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
LRRK1-205ENST00000526457 KIF21BO75037 1637 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 PLEKHD1A6NEE1 506 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 TMF1P82094 1093 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 KANK1Q14678 1352 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 SMARCA4P51532 1647 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 TTLL5Q6EMB2 1281 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 RNF214Q8ND24 703 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
LRRK1-205ENST00000526457 PDILTQ8N807 584 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 MARCH6O60337 910 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 NUCB2P80303 420 aa9.32□□□□□ -0.92
LRRK1-205ENST00000526457 NAT10Q9H0A0 1025 aaKnown RBP9.31□□□□□ -0.92
LRRK1-205ENST00000526457 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 NGEFQ8N5V2 710 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 CCDC112Q8NEF3 446 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 VPS53Q5VIR6 699 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 TRIM5Q9C035 493 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
LRRK1-205ENST00000526457 CHMP4CQ96CF2 233 aa9.31□□□□□ -0.92
LRRK1-205ENST00000526457 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
LRRK1-205ENST00000526457 PDCL2Q8N4E4 241 aa9.3□□□□□ -0.92
LRRK1-205ENST00000526457 CGNL1Q0VF96 1302 aa9.3□□□□□ -0.92
LRRK1-205ENST00000526457 TRAK2O60296 914 aa9.3□□□□□ -0.92
LRRK1-205ENST00000526457 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
LRRK1-205ENST00000526457 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
LRRK1-205ENST00000526457 GTF2A1P52655 376 aaPredicted RBP9.3□□□□□ -0.92
LRRK1-205ENST00000526457 TSPY26PQ9H489 355 aa9.3□□□□□ -0.92
LRRK1-205ENST00000526457 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
LRRK1-205ENST00000526457 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
LRRK1-205ENST00000526457 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
LRRK1-205ENST00000526457 CAVIN1Q6NZI2 390 aaKnown RBP9.29□□□□□ -0.92
LRRK1-205ENST00000526457 CCDC73Q6ZRK6 1079 aa9.29□□□□□ -0.92
LRRK1-205ENST00000526457 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
LRRK1-205ENST00000526457 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
LRRK1-205ENST00000526457 CT47A1Q5JQC4 288 aaPredicted RBP9.29□□□□□ -0.92
LRRK1-205ENST00000526457 ESPNB1AK53 854 aa9.29□□□□□ -0.92
LRRK1-205ENST00000526457 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
LRRK1-205ENST00000526457 ERLIN1O75477 346 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 REC8O95072 547 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 AAMPQ13685 434 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 ERLIN2O94905 339 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 AKAP17AQ02040 695 aaKnown RBP9.28□□□□□ -0.92
LRRK1-205ENST00000526457 PDCL3Q9H2J4 239 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 ABCC8Q09428 1581 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 CBX1P83916 185 aa9.28□□□□□ -0.92
LRRK1-205ENST00000526457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.27□□□□□ -0.92
LRRK1-205ENST00000526457 SMC2O95347 1197 aa9.27□□□□□ -0.92
LRRK1-205ENST00000526457 FAM193AP78312 1265 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 CCAR1Q8IX12 1150 aaKnown RBP9.27□□□□□ -0.93
LRRK1-205ENST00000526457 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
LRRK1-205ENST00000526457 ZBED9Q6R2W3 1325 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
LRRK1-205ENST00000526457 POGKQ9P215 609 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 VPS37CA5D8V6 355 aaPredicted RBP9.27□□□□□ -0.93
LRRK1-205ENST00000526457 CLGNO14967 610 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 CCDC146Q8IYE0 955 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 RILPL2Q969X0 211 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 TOMM22Q9NS69 142 aa9.27□□□□□ -0.93
LRRK1-205ENST00000526457 ODF2Q5BJF6 829 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 OLFM4Q6UX06 510 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 EZRP15311 586 aaKnown RBP9.26□□□□□ -0.93
LRRK1-205ENST00000526457 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
LRRK1-205ENST00000526457 FAM107BQ9H098 131 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
LRRK1-205ENST00000526457 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
LRRK1-205ENST00000526457 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 TIGD1Q96MW7 591 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 NF2P35240 595 aa9.26□□□□□ -0.93
LRRK1-205ENST00000526457 MBD3O95983 291 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 RRP1P56182 461 aaKnown RBP9.25□□□□□ -0.93
LRRK1-205ENST00000526457 SEPT7Q16181 437 aaKnown RBP9.25□□□□□ -0.93
LRRK1-205ENST00000526457 RAB3GAP2Q9H2M9 1393 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 ANKRD45Q5TZF3 282 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 RBM33Q96EV2 1170 aaKnown RBP9.25□□□□□ -0.93
LRRK1-205ENST00000526457 DNAJC2Q99543 621 aaKnown RBP9.25□□□□□ -0.93
LRRK1-205ENST00000526457 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 STK31Q9BXU1 1019 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
LRRK1-205ENST00000526457 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 CCDC102AQ96A19 550 aa9.25□□□□□ -0.93
LRRK1-205ENST00000526457 TRIM29Q14134 588 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 KIF15Q9NS87 1388 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 U2AF1L5P0DN76 240 aaPredicted RBP9.24□□□□□ -0.93
LRRK1-205ENST00000526457 U2AF1Q01081 240 aaKnown RBP eCLIP9.24□□□□□ -0.93
LRRK1-205ENST00000526457 GRPEL1Q9HAV7 217 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 OFD1O75665 1012 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 SMC3Q9UQE7 1217 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 SHTN1A0MZ66 631 aa9.24□□□□□ -0.93
LRRK1-205ENST00000526457 TAX1BP1Q86VP1 789 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms