RNA–Protein interactions for RNA: ENST00000526067.1

ARHGEF12-205, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-205ENST00000526067 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
ARHGEF12-205ENST00000526067 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
ARHGEF12-205ENST00000526067 SLIT1O75093 1534 aa13.34□□□□□ -0.27
ARHGEF12-205ENST00000526067 KCNA6P17658 529 aa13.34□□□□□ -0.27
ARHGEF12-205ENST00000526067 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
ARHGEF12-205ENST00000526067 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
ARHGEF12-205ENST00000526067 ABCC3O15438 1527 aa13.32□□□□□ -0.28
ARHGEF12-205ENST00000526067 ARHGAP31Q2M1Z3 1444 aa13.32□□□□□ -0.28
ARHGEF12-205ENST00000526067 EID1Q9Y6B2 187 aa13.32□□□□□ -0.28
ARHGEF12-205ENST00000526067 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
ARHGEF12-205ENST00000526067 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
ARHGEF12-205ENST00000526067 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
ARHGEF12-205ENST00000526067 GABBR2O75899 941 aa13.3□□□□□ -0.28
ARHGEF12-205ENST00000526067 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
ARHGEF12-205ENST00000526067 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
ARHGEF12-205ENST00000526067 TMEM2Q9UHN6 1383 aa13.29□□□□□ -0.28
ARHGEF12-205ENST00000526067 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
ARHGEF12-205ENST00000526067 IDI1Q13907 227 aa13.27□□□□□ -0.29
ARHGEF12-205ENST00000526067 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
ARHGEF12-205ENST00000526067 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF12-205ENST00000526067 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
ARHGEF12-205ENST00000526067 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
ARHGEF12-205ENST00000526067 TET3O43151 1660 aa13.25□□□□□ -0.29
ARHGEF12-205ENST00000526067 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
ARHGEF12-205ENST00000526067 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
ARHGEF12-205ENST00000526067 JCADQ9P266 1359 aa13.24□□□□□ -0.29
ARHGEF12-205ENST00000526067 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
ARHGEF12-205ENST00000526067 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
ARHGEF12-205ENST00000526067 CFAP65Q6ZU64 1925 aaKnown RBP13.22□□□□□ -0.29
ARHGEF12-205ENST00000526067 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
ARHGEF12-205ENST00000526067 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
ARHGEF12-205ENST00000526067 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF12-205ENST00000526067 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.29
ARHGEF12-205ENST00000526067 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
ARHGEF12-205ENST00000526067 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF12-205ENST00000526067 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
ARHGEF12-205ENST00000526067 SLC52A1Q9NWF4 448 aa13.19□□□□□ -0.3
ARHGEF12-205ENST00000526067 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
ARHGEF12-205ENST00000526067 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
ARHGEF12-205ENST00000526067 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
ARHGEF12-205ENST00000526067 MSH6P52701 1360 aa13.18□□□□□ -0.3
ARHGEF12-205ENST00000526067 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
ARHGEF12-205ENST00000526067 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
ARHGEF12-205ENST00000526067 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
ARHGEF12-205ENST00000526067 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
ARHGEF12-205ENST00000526067 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
ARHGEF12-205ENST00000526067 NOS1P29475 1434 aa13.16□□□□□ -0.3
ARHGEF12-205ENST00000526067 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
ARHGEF12-205ENST00000526067 LHX8Q68G74 356 aa13.15□□□□□ -0.3
ARHGEF12-205ENST00000526067 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
ARHGEF12-205ENST00000526067 EFCAB6Q5THR3 1501 aa13.15□□□□□ -0.3
ARHGEF12-205ENST00000526067 LMTK2Q8IWU2 1503 aa13.15□□□□□ -0.31
ARHGEF12-205ENST00000526067 PIK3C2BO00750 1634 aa13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 RXRBP28702 533 aa13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 KIF15Q9NS87 1388 aa13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 CEP152O94986 1710 aa13.14□□□□□ -0.31
ARHGEF12-205ENST00000526067 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
ARHGEF12-205ENST00000526067 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
ARHGEF12-205ENST00000526067 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
ARHGEF12-205ENST00000526067 ABCC5O15440 1437 aa13.13□□□□□ -0.31
ARHGEF12-205ENST00000526067 LRP6O75581 1613 aa13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 KANK1Q14678 1352 aa13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
ARHGEF12-205ENST00000526067 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
ARHGEF12-205ENST00000526067 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF12-205ENST00000526067 TRIM52Q96A61 297 aa13.11□□□□□ -0.31
ARHGEF12-205ENST00000526067 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
ARHGEF12-205ENST00000526067 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
ARHGEF12-205ENST00000526067 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
ARHGEF12-205ENST00000526067 SRCAPQ6ZRS2 3230 aa13.09□□□□□ -0.31
ARHGEF12-205ENST00000526067 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
ARHGEF12-205ENST00000526067 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
ARHGEF12-205ENST00000526067 CHD2O14647 1828 aaKnown RBP13.08□□□□□ -0.32
ARHGEF12-205ENST00000526067 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
ARHGEF12-205ENST00000526067 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
ARHGEF12-205ENST00000526067 BCANQ96GW7 911 aa13.07□□□□□ -0.32
ARHGEF12-205ENST00000526067 ATF3P18847 181 aa13.06□□□□□ -0.32
ARHGEF12-205ENST00000526067 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
ARHGEF12-205ENST00000526067 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF12-205ENST00000526067 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 RIMS2Q9UQ26 1411 aa13.04□□□□□ -0.32
ARHGEF12-205ENST00000526067 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
ARHGEF12-205ENST00000526067 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
ARHGEF12-205ENST00000526067 AFF2P51816 1311 aa13.03□□□□□ -0.32
ARHGEF12-205ENST00000526067 DAPK1P53355 1430 aa13.03□□□□□ -0.32
ARHGEF12-205ENST00000526067 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF12-205ENST00000526067 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
ARHGEF12-205ENST00000526067 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
ARHGEF12-205ENST00000526067 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms