RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 NFKBIBQ15653 356 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 C8orf34Q49A92 452 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
BDNF-213ENST00000525950 MADDQ8WXG6 1647 aa10.43□□□□□ -0.74
BDNF-213ENST00000525950 ASXL1Q8IXJ9 1541 aa10.43□□□□□ -0.74
BDNF-213ENST00000525950 SLFN5Q08AF3 891 aa10.43□□□□□ -0.74
BDNF-213ENST00000525950 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
BDNF-213ENST00000525950 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
BDNF-213ENST00000525950 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
BDNF-213ENST00000525950 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
BDNF-213ENST00000525950 WDR43Q15061 677 aaKnown RBP eCLIP10.42□□□□□ -0.74
BDNF-213ENST00000525950 KNSTRNQ9Y448 316 aa10.42□□□□□ -0.74
BDNF-213ENST00000525950 NINLQ9Y2I6 1382 aa10.41□□□□□ -0.74
BDNF-213ENST00000525950 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
BDNF-213ENST00000525950 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
BDNF-213ENST00000525950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.41□□□□□ -0.74
BDNF-213ENST00000525950 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.74
BDNF-213ENST00000525950 SPHKAPQ2M3C7 1700 aa10.4□□□□□ -0.74
BDNF-213ENST00000525950 ARHGAP5Q13017 1502 aa10.4□□□□□ -0.74
BDNF-213ENST00000525950 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
BDNF-213ENST00000525950 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
BDNF-213ENST00000525950 TTC37Q6PGP7 1564 aa10.4□□□□□ -0.75
BDNF-213ENST00000525950 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
BDNF-213ENST00000525950 TRPM2O94759 1503 aa10.39□□□□□ -0.75
BDNF-213ENST00000525950 PTPRTO14522 1441 aa10.39□□□□□ -0.75
BDNF-213ENST00000525950 MYOM1P52179 1685 aa10.39□□□□□ -0.75
BDNF-213ENST00000525950 AAMPQ13685 434 aa10.38□□□□□ -0.75
BDNF-213ENST00000525950 CEP152O94986 1710 aa10.38□□□□□ -0.75
BDNF-213ENST00000525950 E9PSI1 815 aa10.37□□□□□ -0.75
BDNF-213ENST00000525950 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
BDNF-213ENST00000525950 FBLN2P98095 1184 aa10.36□□□□□ -0.75
BDNF-213ENST00000525950 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
BDNF-213ENST00000525950 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
BDNF-213ENST00000525950 SKAP1Q86WV1 359 aa10.36□□□□□ -0.75
BDNF-213ENST00000525950 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
BDNF-213ENST00000525950 SHROOM2Q13796 1616 aa10.35□□□□□ -0.75
BDNF-213ENST00000525950 KDM5AP29375 1690 aaKnown RBP10.35□□□□□ -0.75
BDNF-213ENST00000525950 PLCH2O75038 1416 aa10.35□□□□□ -0.75
BDNF-213ENST00000525950 MAPK8IP3Q9UPT6 1336 aa10.35□□□□□ -0.75
BDNF-213ENST00000525950 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
BDNF-213ENST00000525950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.75
BDNF-213ENST00000525950 DEPDC5O75140 1603 aa10.34□□□□□ -0.75
BDNF-213ENST00000525950 ABCC1P33527 1531 aa10.34□□□□□ -0.75
BDNF-213ENST00000525950 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
BDNF-213ENST00000525950 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
BDNF-213ENST00000525950 USP19O94966 1318 aa10.33□□□□□ -0.76
BDNF-213ENST00000525950 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
BDNF-213ENST00000525950 TET3O43151 1660 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 MYOM2P54296 1465 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 VWDEQ8N2E2 1590 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 SBNO2Q9Y2G9 1366 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 PRKCSHP14314 528 aaPredicted RBP10.32□□□□□ -0.76
BDNF-213ENST00000525950 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
BDNF-213ENST00000525950 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
BDNF-213ENST00000525950 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
BDNF-213ENST00000525950 APAF1O14727 1248 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 BECN1Q14457 450 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 EFCAB2Q5VUJ9 269 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 FAM43AQ8N2R8 423 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 FRAT2O75474 233 aaPredicted RBP10.3□□□□□ -0.76
BDNF-213ENST00000525950 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
BDNF-213ENST00000525950 CLUAP1Q96AJ1 413 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
BDNF-213ENST00000525950 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 IGHDP01880 384 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 RGS3P49796 1198 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 KANK1Q14678 1352 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 UHRF1BP1LA0JNW5 1464 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 BCAR3O75815 825 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 PMFBP1Q8TBY8 1022 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 MAP3K4Q9Y6R4 1608 aa10.29□□□□□ -0.76
BDNF-213ENST00000525950 CENPJQ9HC77 1338 aaPredicted RBP10.28□□□□□ -0.76
BDNF-213ENST00000525950 PHF23Q9BUL5 403 aaPredicted RBP10.28□□□□□ -0.76
BDNF-213ENST00000525950 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
BDNF-213ENST00000525950 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
BDNF-213ENST00000525950 NRXN1Q9ULB1 1477 aa10.27□□□□□ -0.76
BDNF-213ENST00000525950 TRAPPC8Q9Y2L5 1435 aa10.27□□□□□ -0.77
BDNF-213ENST00000525950 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
BDNF-213ENST00000525950 CCDC27Q2M243 656 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 CCDC146Q8IYE0 955 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 USP32Q8NFA0 1604 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 IFT172Q9UG01 1749 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 IQSEC2Q5JU85 1478 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 WDR63Q8IWG1 891 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 ANTXR1Q9H6X2 564 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 SETBP1Q9Y6X0 1596 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
BDNF-213ENST00000525950 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
BDNF-213ENST00000525950 L1TD1Q5T7N2 865 aaKnown RBP10.25□□□□□ -0.77
BDNF-213ENST00000525950 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
BDNF-213ENST00000525950 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
BDNF-213ENST00000525950 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
BDNF-213ENST00000525950 TBC1D32Q96NH3 1257 aa10.24□□□□□ -0.77
BDNF-213ENST00000525950 RARSP54136 660 aaKnown RBP10.24□□□□□ -0.77
BDNF-213ENST00000525950 ZCCHC11Q5TAX3 1644 aaKnown RBP10.24□□□□□ -0.77
BDNF-213ENST00000525950 RUNDC1Q96C34 613 aa10.23□□□□□ -0.77
BDNF-213ENST00000525950 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
BDNF-213ENST00000525950 INO80Q9ULG1 1556 aaPredicted RBP10.23□□□□□ -0.77
BDNF-213ENST00000525950 UPF2Q9HAU5 1272 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms