RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OATP04181 439 aa7.63□□□□□ -1.19
CSDE1-208ENST00000524652 GNPATO15228 680 aa7.62□□□□□ -1.19
CSDE1-208ENST00000524652 FAM161AQ3B820 660 aa7.62□□□□□ -1.19
CSDE1-208ENST00000524652 PXYLP1Q8TE99 480 aa7.62□□□□□ -1.19
CSDE1-208ENST00000524652 METTL3Q86U44 580 aaKnown RBP7.6□□□□□ -1.19
CSDE1-208ENST00000524652 GPIHBP1Q8IV16 184 aa7.59□□□□□ -1.19
CSDE1-208ENST00000524652 KMT5BQ4FZB7 885 aa7.58□□□□□ -1.2
CSDE1-208ENST00000524652 ZNF516Q92618 1163 aa7.58□□□□□ -1.2
CSDE1-208ENST00000524652 PCDHB3Q9Y5E6 796 aa7.58□□□□□ -1.2
CSDE1-208ENST00000524652 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-208ENST00000524652 FECHP22830 423 aa7.57□□□□□ -1.2
CSDE1-208ENST00000524652 COPS2P61201 443 aa7.57□□□□□ -1.2
CSDE1-208ENST00000524652 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
CSDE1-208ENST00000524652 ZPR1O75312 459 aa7.56□□□□□ -1.2
CSDE1-208ENST00000524652 CFHP08603 1231 aa7.56□□□□□ -1.2
CSDE1-208ENST00000524652 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-208ENST00000524652 PPP1R18Q6NYC8 613 aa7.55□□□□□ -1.2
CSDE1-208ENST00000524652 SLC10A3P09131 477 aa7.54□□□□□ -1.2
CSDE1-208ENST00000524652 RSPH4AQ5TD94 716 aa7.54□□□□□ -1.2
CSDE1-208ENST00000524652 BLOC1S3Q6QNY0 202 aa7.54□□□□□ -1.2
CSDE1-208ENST00000524652 GGCXP38435 758 aa7.53□□□□□ -1.2
CSDE1-208ENST00000524652 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
CSDE1-208ENST00000524652 DAXXQ9UER7 740 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-208ENST00000524652 NKX2-3Q8TAU0 364 aa7.52□□□□□ -1.21
CSDE1-208ENST00000524652 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
CSDE1-208ENST00000524652 V9GY48 417 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-208ENST00000524652 MAP2K5Q13163 448 aa7.5□□□□□ -1.21
CSDE1-208ENST00000524652 SULF1Q8IWU6 871 aa7.5□□□□□ -1.21
CSDE1-208ENST00000524652 NR1I2O75469 434 aa7.49□□□□□ -1.21
CSDE1-208ENST00000524652 PHOX2BQ99453 314 aa7.49□□□□□ -1.21
CSDE1-208ENST00000524652 PRKD2Q9BZL6 878 aa7.49□□□□□ -1.21
CSDE1-208ENST00000524652 TLL1O43897 1013 aa7.48□□□□□ -1.21
CSDE1-208ENST00000524652 RDH13Q8NBN7 331 aa7.48□□□□□ -1.21
CSDE1-208ENST00000524652 LAPTM4AQ15012 233 aa7.47□□□□□ -1.21
CSDE1-208ENST00000524652 DDX11L8A8MPP1 907 aa7.46□□□□□ -1.22
CSDE1-208ENST00000524652 ADH1BP00325 375 aa7.46□□□□□ -1.22
CSDE1-208ENST00000524652 NLRP7Q8WX94 980 aa7.46□□□□□ -1.22
CSDE1-208ENST00000524652 RNF223E7ERA6 249 aa7.45□□□□□ -1.22
CSDE1-208ENST00000524652 IRF6O14896 467 aa7.45□□□□□ -1.22
CSDE1-208ENST00000524652 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
CSDE1-208ENST00000524652 MINK1Q8N4C8 1332 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-208ENST00000524652 GCGRP47871 477 aa7.44□□□□□ -1.22
CSDE1-208ENST00000524652 FUT2Q10981 343 aa7.44□□□□□ -1.22
CSDE1-208ENST00000524652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
CSDE1-208ENST00000524652 ANKLE1Q8NAG6 615 aa7.44□□□□□ -1.22
CSDE1-208ENST00000524652 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
CSDE1-208ENST00000524652 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
CSDE1-208ENST00000524652 MORN1Q5T089 497 aa7.43□□□□□ -1.22
CSDE1-208ENST00000524652 S1PR4O95977 384 aa7.42□□□□□ -1.22
CSDE1-208ENST00000524652 Q6ZNB5 142 aa7.41□□□□□ -1.22
CSDE1-208ENST00000524652 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
CSDE1-208ENST00000524652 SPSB2Q99619 263 aa7.41□□□□□ -1.22
CSDE1-208ENST00000524652 SLC6A16Q9GZN6 736 aa7.41□□□□□ -1.22
CSDE1-208ENST00000524652 NRG2O14511 850 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-208ENST00000524652 GFRA3O60609 400 aa7.4□□□□□ -1.22
CSDE1-208ENST00000524652 CD46P15529 392 aa7.4□□□□□ -1.22
CSDE1-208ENST00000524652 GRIPAP1Q4V328 841 aa7.4□□□□□ -1.22
CSDE1-208ENST00000524652 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.22
CSDE1-208ENST00000524652 SALL2Q9Y467 1007 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-208ENST00000524652 THAP11Q96EK4 314 aa7.39□□□□□ -1.23
CSDE1-208ENST00000524652 SLC19A1P41440 591 aa7.38□□□□□ -1.23
CSDE1-208ENST00000524652 MDM2Q00987 491 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-208ENST00000524652 SLC27A5Q9Y2P5 690 aa7.38□□□□□ -1.23
CSDE1-208ENST00000524652 PPEF1O14829 653 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-208ENST00000524652 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-208ENST00000524652 CLCN1P35523 988 aa7.37□□□□□ -1.23
CSDE1-208ENST00000524652 EMID1Q96A84 441 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-208ENST00000524652 GPCPD1Q9NPB8 672 aa7.37□□□□□ -1.23
CSDE1-208ENST00000524652 SPRYD7Q5W111 196 aa7.36□□□□□ -1.23
CSDE1-208ENST00000524652 PDZRN3Q9UPQ7 1066 aa7.36□□□□□ -1.23
CSDE1-208ENST00000524652 KDM4AO75164 1064 aa7.35□□□□□ -1.23
CSDE1-208ENST00000524652 ZNF598Q86UK7 904 aaKnown RBP7.35□□□□□ -1.23
CSDE1-208ENST00000524652 ZMYND10O75800 440 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 USP46P62068 366 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 Q3C1V9 767 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 MSS51Q4VC12 460 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
CSDE1-208ENST00000524652 FAM217BQ9NTX9 383 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-208ENST00000524652 PRR20EP86478 221 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 PRR20CP86479 221 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 PRR20DP86480 221 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 PRR20BP86481 221 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 PRR20AP86496 221 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 RNF19BQ6ZMZ0 732 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 LIAT1Q6ZQX7 453 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 TRIM67Q6ZTA4 783 aa7.33□□□□□ -1.24
CSDE1-208ENST00000524652 FAM160A2Q8N612 972 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-208ENST00000524652 KRI1Q8N9T8 703 aaKnown RBP7.33□□□□□ -1.24
CSDE1-208ENST00000524652 ZNF697Q5TEC3 545 aa7.32□□□□□ -1.24
CSDE1-208ENST00000524652 ZC3H15Q8WU90 426 aaKnown RBP7.32□□□□□ -1.24
CSDE1-208ENST00000524652 LCE2BO14633 110 aa7.31□□□□□ -1.24
CSDE1-208ENST00000524652 HOXA2O43364 376 aa7.31□□□□□ -1.24
CSDE1-208ENST00000524652 TRAF7Q6Q0C0 670 aa7.31□□□□□ -1.24
CSDE1-208ENST00000524652 FCF1Q9Y324 198 aaKnown RBP7.31□□□□□ -1.24
CSDE1-208ENST00000524652 RPIAP49247 311 aa7.3□□□□□ -1.24
CSDE1-208ENST00000524652 AMHR2Q16671 573 aa7.3□□□□□ -1.24
CSDE1-208ENST00000524652 PRDM9Q9NQV7 894 aa7.3□□□□□ -1.24
CSDE1-208ENST00000524652 GDF9O60383 454 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms