RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 SCAF11Q99590 1463 aaKnown RBP13.75□□□□□ -0.21
VPS13B-212ENST00000524330 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
VPS13B-212ENST00000524330 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
VPS13B-212ENST00000524330 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
VPS13B-212ENST00000524330 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
VPS13B-212ENST00000524330 MLECQ14165 292 aa13.74□□□□□ -0.21
VPS13B-212ENST00000524330 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
VPS13B-212ENST00000524330 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
VPS13B-212ENST00000524330 SYNMO15061 1565 aa13.74□□□□□ -0.21
VPS13B-212ENST00000524330 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
VPS13B-212ENST00000524330 PPLO60437 1756 aa13.73□□□□□ -0.21
VPS13B-212ENST00000524330 NRXN1Q9ULB1 1477 aa13.73□□□□□ -0.21
VPS13B-212ENST00000524330 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
VPS13B-212ENST00000524330 ZFYVE9O95405 1425 aa13.72□□□□□ -0.21
VPS13B-212ENST00000524330 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
VPS13B-212ENST00000524330 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
VPS13B-212ENST00000524330 IDI1Q13907 227 aa13.71□□□□□ -0.21
VPS13B-212ENST00000524330 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.22
VPS13B-212ENST00000524330 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
VPS13B-212ENST00000524330 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
VPS13B-212ENST00000524330 ADGRF5Q8IZF2 1346 aa13.69□□□□□ -0.22
VPS13B-212ENST00000524330 YTHDC1Q96MU7 727 aaKnown RBP13.69□□□□□ -0.22
VPS13B-212ENST00000524330 C14orf93Q9H972 538 aaKnown RBP13.69□□□□□ -0.22
VPS13B-212ENST00000524330 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
VPS13B-212ENST00000524330 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
VPS13B-212ENST00000524330 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
VPS13B-212ENST00000524330 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
VPS13B-212ENST00000524330 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS13B-212ENST00000524330 NEXMIFQ5QGS0 1516 aa13.66□□□□□ -0.22
VPS13B-212ENST00000524330 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
VPS13B-212ENST00000524330 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
VPS13B-212ENST00000524330 TESK2Q96S53 571 aa13.65□□□□□ -0.22
VPS13B-212ENST00000524330 TNRQ92752 1358 aa13.64□□□□□ -0.23
VPS13B-212ENST00000524330 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
VPS13B-212ENST00000524330 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
VPS13B-212ENST00000524330 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
VPS13B-212ENST00000524330 RALBP1Q15311 655 aa13.62□□□□□ -0.23
VPS13B-212ENST00000524330 KDM5AP29375 1690 aaKnown RBP13.61□□□□□ -0.23
VPS13B-212ENST00000524330 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
VPS13B-212ENST00000524330 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
VPS13B-212ENST00000524330 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
VPS13B-212ENST00000524330 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
VPS13B-212ENST00000524330 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.23
VPS13B-212ENST00000524330 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
VPS13B-212ENST00000524330 PUS7Q96PZ0 661 aaKnown RBP13.58□□□□□ -0.24
VPS13B-212ENST00000524330 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
VPS13B-212ENST00000524330 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
VPS13B-212ENST00000524330 ADGRB1O14514 1584 aa13.57□□□□□ -0.24
VPS13B-212ENST00000524330 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
VPS13B-212ENST00000524330 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
VPS13B-212ENST00000524330 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
VPS13B-212ENST00000524330 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
VPS13B-212ENST00000524330 PANK3Q9H999 370 aa13.55□□□□□ -0.24
VPS13B-212ENST00000524330 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
VPS13B-212ENST00000524330 POGKQ9P215 609 aa13.54□□□□□ -0.24
VPS13B-212ENST00000524330 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
VPS13B-212ENST00000524330 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
VPS13B-212ENST00000524330 BCANQ96GW7 911 aa13.53□□□□□ -0.24
VPS13B-212ENST00000524330 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
VPS13B-212ENST00000524330 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
VPS13B-212ENST00000524330 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
VPS13B-212ENST00000524330 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
VPS13B-212ENST00000524330 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
VPS13B-212ENST00000524330 C3P01024 1663 aa13.51□□□□□ -0.25
VPS13B-212ENST00000524330 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
VPS13B-212ENST00000524330 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
VPS13B-212ENST00000524330 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
VPS13B-212ENST00000524330 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
VPS13B-212ENST00000524330 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
VPS13B-212ENST00000524330 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
VPS13B-212ENST00000524330 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
VPS13B-212ENST00000524330 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
VPS13B-212ENST00000524330 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
VPS13B-212ENST00000524330 STK26Q9P289 416 aa13.49□□□□□ -0.25
VPS13B-212ENST00000524330 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
VPS13B-212ENST00000524330 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
VPS13B-212ENST00000524330 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
VPS13B-212ENST00000524330 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
VPS13B-212ENST00000524330 ABCC11Q96J66 1382 aa13.47□□□□□ -0.25
VPS13B-212ENST00000524330 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
VPS13B-212ENST00000524330 PLEKHG1Q9ULL1 1385 aa13.46□□□□□ -0.25
VPS13B-212ENST00000524330 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
VPS13B-212ENST00000524330 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
VPS13B-212ENST00000524330 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
VPS13B-212ENST00000524330 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS13B-212ENST00000524330 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
VPS13B-212ENST00000524330 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
VPS13B-212ENST00000524330 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
VPS13B-212ENST00000524330 CC2D1BQ5T0F9 858 aaKnown RBP13.44□□□□□ -0.26
VPS13B-212ENST00000524330 SLIT1O75093 1534 aa13.44□□□□□ -0.26
VPS13B-212ENST00000524330 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
VPS13B-212ENST00000524330 PTPRMP28827 1452 aa13.43□□□□□ -0.26
VPS13B-212ENST00000524330 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
VPS13B-212ENST00000524330 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
VPS13B-212ENST00000524330 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
VPS13B-212ENST00000524330 MYOM1P52179 1685 aa13.43□□□□□ -0.26
VPS13B-212ENST00000524330 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
VPS13B-212ENST00000524330 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
VPS13B-212ENST00000524330 CGNL1Q0VF96 1302 aa13.41□□□□□ -0.26
VPS13B-212ENST00000524330 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms