RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
SCUBE2-208ENST00000524317 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
SCUBE2-208ENST00000524317 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
SCUBE2-208ENST00000524317 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
SCUBE2-208ENST00000524317 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
SCUBE2-208ENST00000524317 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
SCUBE2-208ENST00000524317 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 HECW2Q9P2P5 1572 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 LAMC1P11047 1609 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 TESK2Q96S53 571 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 SPHKAPQ2M3C7 1700 aa15.96■□□□□ 0.15
SCUBE2-208ENST00000524317 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCUBE2-208ENST00000524317 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
SCUBE2-208ENST00000524317 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
SCUBE2-208ENST00000524317 GGT6Q6P531 493 aa15.94■□□□□ 0.14
SCUBE2-208ENST00000524317 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
SCUBE2-208ENST00000524317 MADDQ8WXG6 1647 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
SCUBE2-208ENST00000524317 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 PPRC1Q5VV67 1664 aaKnown RBP15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 NPATQ14207 1427 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 GLI2P10070 1586 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 CEP152O94986 1710 aa15.91■□□□□ 0.14
SCUBE2-208ENST00000524317 FAM9BQ8IZU0 186 aa15.9■□□□□ 0.14
SCUBE2-208ENST00000524317 WASHC2CQ9Y4E1 1318 aa15.89■□□□□ 0.13
SCUBE2-208ENST00000524317 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
SCUBE2-208ENST00000524317 TMF1P82094 1093 aa15.88■□□□□ 0.13
SCUBE2-208ENST00000524317 ABCC3O15438 1527 aa15.87■□□□□ 0.13
SCUBE2-208ENST00000524317 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
SCUBE2-208ENST00000524317 MYOM2P54296 1465 aa15.86■□□□□ 0.13
SCUBE2-208ENST00000524317 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
SCUBE2-208ENST00000524317 YEATS2Q9ULM3 1422 aa15.86■□□□□ 0.13
SCUBE2-208ENST00000524317 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
SCUBE2-208ENST00000524317 KTN1Q86UP2 1357 aaKnown RBP15.85■□□□□ 0.13
SCUBE2-208ENST00000524317 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
SCUBE2-208ENST00000524317 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
SCUBE2-208ENST00000524317 RALBP1Q15311 655 aa15.84■□□□□ 0.13
SCUBE2-208ENST00000524317 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
SCUBE2-208ENST00000524317 RICTORQ6R327 1708 aa15.83■□□□□ 0.12
SCUBE2-208ENST00000524317 ADGRB3O60242 1522 aa15.83■□□□□ 0.12
SCUBE2-208ENST00000524317 DIP2BQ9P265 1576 aa15.82■□□□□ 0.12
SCUBE2-208ENST00000524317 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
SCUBE2-208ENST00000524317 MYBBP1AQ9BQG0 1328 aaKnown RBP15.82■□□□□ 0.12
SCUBE2-208ENST00000524317 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
SCUBE2-208ENST00000524317 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
SCUBE2-208ENST00000524317 NOS1P29475 1434 aa15.81■□□□□ 0.12
SCUBE2-208ENST00000524317 PANK3Q9H999 370 aa15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 TMC1Q8TDI8 760 aa15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 IQGAP1P46940 1657 aa15.8■□□□□ 0.12
SCUBE2-208ENST00000524317 PARD3Q8TEW0 1356 aa15.79■□□□□ 0.12
SCUBE2-208ENST00000524317 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
SCUBE2-208ENST00000524317 ARHGAP31Q2M1Z3 1444 aa15.79■□□□□ 0.12
SCUBE2-208ENST00000524317 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
SCUBE2-208ENST00000524317 MROH2AA6NES4 1674 aa15.77■□□□□ 0.12
SCUBE2-208ENST00000524317 ZMYM4Q5VZL5 1548 aa15.77■□□□□ 0.12
SCUBE2-208ENST00000524317 NEFLP07196 543 aa15.77■□□□□ 0.11
SCUBE2-208ENST00000524317 CDCA8Q53HL2 280 aa15.77■□□□□ 0.11
SCUBE2-208ENST00000524317 KIAA1210Q9ULL0 1709 aa15.76■□□□□ 0.11
SCUBE2-208ENST00000524317 RPGRIP1LQ68CZ1 1315 aa15.76■□□□□ 0.11
SCUBE2-208ENST00000524317 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
SCUBE2-208ENST00000524317 KIF1BO60333 1816 aa15.75■□□□□ 0.11
SCUBE2-208ENST00000524317 PIK3C2GO75747 1445 aa15.75■□□□□ 0.11
SCUBE2-208ENST00000524317 NLRP13Q86W25 1043 aa15.75■□□□□ 0.11
SCUBE2-208ENST00000524317 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
SCUBE2-208ENST00000524317 IFT172Q9UG01 1749 aa15.73■□□□□ 0.11
SCUBE2-208ENST00000524317 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-208ENST00000524317 SYNMO15061 1565 aa15.73■□□□□ 0.11
SCUBE2-208ENST00000524317 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-208ENST00000524317 RGL2O15211 777 aa15.73■□□□□ 0.11
SCUBE2-208ENST00000524317 ECM2O94769 699 aaPredicted RBP15.72■□□□□ 0.11
SCUBE2-208ENST00000524317 IDI1Q13907 227 aa15.72■□□□□ 0.11
SCUBE2-208ENST00000524317 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
SCUBE2-208ENST00000524317 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.11
SCUBE2-208ENST00000524317 ZC3H13Q5T200 1668 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-208ENST00000524317 PIK3C2BO00750 1634 aa15.7■□□□□ 0.1
SCUBE2-208ENST00000524317 ARID3AQ99856 593 aa15.69■□□□□ 0.1
SCUBE2-208ENST00000524317 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
SCUBE2-208ENST00000524317 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
SCUBE2-208ENST00000524317 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
SCUBE2-208ENST00000524317 ERVK-7P63135 1459 aa15.68■□□□□ 0.1
SCUBE2-208ENST00000524317 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
SCUBE2-208ENST00000524317 ADGRB1O14514 1584 aa15.68■□□□□ 0.1
SCUBE2-208ENST00000524317 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
SCUBE2-208ENST00000524317 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
SCUBE2-208ENST00000524317 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
SCUBE2-208ENST00000524317 TMEM132EQ6IEE7 984 aa15.67■□□□□ 0.1
SCUBE2-208ENST00000524317 REREQ9P2R6 1566 aa15.66■□□□□ 0.1
SCUBE2-208ENST00000524317 PPLO60437 1756 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms