RNA–Protein interactions for RNA: ENST00000524233.1

RNF19A-215, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RNF19A, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-215ENST00000524233 PXYLP1Q8TE99 480 aa13.01□□□□□ -0.33
RNF19A-215ENST00000524233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
RNF19A-215ENST00000524233 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
RNF19A-215ENST00000524233 MTRQ99707 1265 aa13□□□□□ -0.33
RNF19A-215ENST00000524233 METTL3Q86U44 580 aaKnown RBP12.99□□□□□ -0.33
RNF19A-215ENST00000524233 IL21Q9HBE4 155 aa12.96□□□□□ -0.33
RNF19A-215ENST00000524233 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
RNF19A-215ENST00000524233 RGS20O76081 388 aa12.93□□□□□ -0.34
RNF19A-215ENST00000524233 COPS2P61201 443 aa12.92□□□□□ -0.34
RNF19A-215ENST00000524233 CFHP08603 1231 aa12.91□□□□□ -0.34
RNF19A-215ENST00000524233 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
RNF19A-215ENST00000524233 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
RNF19A-215ENST00000524233 SLC10A3P09131 477 aa12.89□□□□□ -0.35
RNF19A-215ENST00000524233 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
RNF19A-215ENST00000524233 NLRP7Q8WX94 980 aa12.89□□□□□ -0.35
RNF19A-215ENST00000524233 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
RNF19A-215ENST00000524233 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
RNF19A-215ENST00000524233 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
RNF19A-215ENST00000524233 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
RNF19A-215ENST00000524233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
RNF19A-215ENST00000524233 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
RNF19A-215ENST00000524233 ZPR1O75312 459 aa12.83□□□□□ -0.36
RNF19A-215ENST00000524233 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
RNF19A-215ENST00000524233 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
RNF19A-215ENST00000524233 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
RNF19A-215ENST00000524233 RDH13Q8NBN7 331 aa12.81□□□□□ -0.36
RNF19A-215ENST00000524233 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
RNF19A-215ENST00000524233 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
RNF19A-215ENST00000524233 IRF6O14896 467 aa12.78□□□□□ -0.36
RNF19A-215ENST00000524233 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
RNF19A-215ENST00000524233 TLL1O43897 1013 aa12.77□□□□□ -0.37
RNF19A-215ENST00000524233 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
RNF19A-215ENST00000524233 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
RNF19A-215ENST00000524233 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
RNF19A-215ENST00000524233 NR1I2O75469 434 aa12.74□□□□□ -0.37
RNF19A-215ENST00000524233 GGCXP38435 758 aa12.74□□□□□ -0.37
RNF19A-215ENST00000524233 PUS10Q3MIT2 529 aaKnown RBP12.73□□□□□ -0.37
RNF19A-215ENST00000524233 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
RNF19A-215ENST00000524233 GCGRP47871 477 aa12.7□□□□□ -0.38
RNF19A-215ENST00000524233 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
RNF19A-215ENST00000524233 FUT2Q10981 343 aa12.7□□□□□ -0.38
RNF19A-215ENST00000524233 PRKD2Q9BZL6 878 aa12.7□□□□□ -0.38
RNF19A-215ENST00000524233 ADH1BP00325 375 aa12.68□□□□□ -0.38
RNF19A-215ENST00000524233 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
RNF19A-215ENST00000524233 TMUB1Q9BVT8 246 aa12.68□□□□□ -0.38
RNF19A-215ENST00000524233 S1PR4O95977 384 aa12.66□□□□□ -0.38
RNF19A-215ENST00000524233 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
RNF19A-215ENST00000524233 KRI1Q8N9T8 703 aaKnown RBP12.66□□□□□ -0.38
RNF19A-215ENST00000524233 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
RNF19A-215ENST00000524233 CD46P15529 392 aa12.65□□□□□ -0.38
RNF19A-215ENST00000524233 MORN1Q5T089 497 aa12.65□□□□□ -0.38
RNF19A-215ENST00000524233 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
RNF19A-215ENST00000524233 ZMYND10O75800 440 aa12.64□□□□□ -0.39
RNF19A-215ENST00000524233 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
RNF19A-215ENST00000524233 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
RNF19A-215ENST00000524233 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
RNF19A-215ENST00000524233 CLCN1P35523 988 aa12.62□□□□□ -0.39
RNF19A-215ENST00000524233 SPSB2Q99619 263 aa12.62□□□□□ -0.39
RNF19A-215ENST00000524233 SLC6A16Q9GZN6 736 aa12.62□□□□□ -0.39
RNF19A-215ENST00000524233 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
RNF19A-215ENST00000524233 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
RNF19A-215ENST00000524233 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
RNF19A-215ENST00000524233 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
RNF19A-215ENST00000524233 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
RNF19A-215ENST00000524233 KDM4AO75164 1064 aa12.57□□□□□ -0.4
RNF19A-215ENST00000524233 FMNL1O95466 1100 aaPredicted RBP12.57□□□□□ -0.4
RNF19A-215ENST00000524233 THAP11Q96EK4 314 aa12.57□□□□□ -0.4
RNF19A-215ENST00000524233 REPIN1Q9BWE0 567 aaKnown RBP12.55□□□□□ -0.4
RNF19A-215ENST00000524233 SLC19A1P41440 591 aa12.54□□□□□ -0.4
RNF19A-215ENST00000524233 EMID1Q96A84 441 aaPredicted RBP12.54□□□□□ -0.4
RNF19A-215ENST00000524233 TTLL12Q14166 644 aaPredicted RBP12.53□□□□□ -0.4
RNF19A-215ENST00000524233 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
RNF19A-215ENST00000524233 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
RNF19A-215ENST00000524233 GFRA3O60609 400 aa12.52□□□□□ -0.41
RNF19A-215ENST00000524233 USP46P62068 366 aa12.52□□□□□ -0.41
RNF19A-215ENST00000524233 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
RNF19A-215ENST00000524233 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
RNF19A-215ENST00000524233 AMHR2Q16671 573 aa12.51□□□□□ -0.41
RNF19A-215ENST00000524233 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
RNF19A-215ENST00000524233 HOXA2O43364 376 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 Q3C1V9 767 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 PLA2G2CQ5R387 149 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 Q6ZNB5 142 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 HLA-CQ95604 372 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
RNF19A-215ENST00000524233 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
RNF19A-215ENST00000524233 SSTR3P32745 418 aaPredicted RBP12.48□□□□□ -0.41
RNF19A-215ENST00000524233 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
RNF19A-215ENST00000524233 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
RNF19A-215ENST00000524233 MSS51Q4VC12 460 aa12.47□□□□□ -0.41
RNF19A-215ENST00000524233 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
RNF19A-215ENST00000524233 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
RNF19A-215ENST00000524233 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
RNF19A-215ENST00000524233 FCF1Q9Y324 198 aaKnown RBP12.46□□□□□ -0.41
RNF19A-215ENST00000524233 NRG2O14511 850 aaPredicted RBP12.45□□□□□ -0.42
RNF19A-215ENST00000524233 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
RNF19A-215ENST00000524233 AK7Q96M32 723 aa12.45□□□□□ -0.42
RNF19A-215ENST00000524233 TRIM66O15016 1216 aa12.44□□□□□ -0.42
RNF19A-215ENST00000524233 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
RNF19A-215ENST00000524233 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms