RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, human

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSGALNACT1-215	ENST00000524112	ZNF644	Q9H582	1327 aa	Predicted RBP	13.79	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	ERBIN	Q96RT1	1412 aa		13.79	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	MROH1	Q8NDA8	1641 aa		13.79	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	CCDC125	Q86Z20	511 aa		13.78	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	STAG3	Q9UJ98	1225 aa		13.78	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	PIK3R4	Q99570	1358 aa		13.78	□□□□□ -0.2
CSGALNACT1-215	ENST00000524112	KANK1	Q14678	1352 aa		13.77	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	SLC52A1	Q9NWF4	448 aa		13.77	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	DCC	P43146	1447 aa		13.76	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	PIK3C2B	O00750	1634 aa		13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	LMTK2	Q8IWU2	1503 aa		13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	CACNB1	Q02641	598 aa	Predicted RBP	13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	NGLY1	Q96IV0	654 aa		13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	CHD2	O14647	1828 aa	Known RBP	13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	CEP152	O94986	1710 aa		13.75	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	CFAP65	Q6ZU64	1925 aa	Known RBP	13.74	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	ATAD2	Q6PL18	1390 aa		13.74	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	ZRANB1	Q9UGI0	708 aa		13.74	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	DIP2A	Q14689	1571 aa		13.74	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	RBM6	P78332	1123 aa	Known RBP	13.73	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	C19orf44	Q9H6X5	657 aa		13.73	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	RPRD2	Q5VT52	1461 aa	Known RBP	13.73	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	LRP6	O75581	1613 aa		13.72	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	ADGRB3	O60242	1522 aa		13.72	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	PLEKHG1	Q9ULL1	1385 aa		13.71	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	TRIM52	Q96A61	297 aa		13.71	□□□□□ -0.21
CSGALNACT1-215	ENST00000524112	MYOM3	Q5VTT5	1437 aa		13.71	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	SETD5	Q9C0A6	1442 aa		13.71	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	TBX22	Q9Y458	520 aa		13.7	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	ATF3	P18847	181 aa		13.69	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	NOS1	P29475	1434 aa		13.67	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	LRRC59	Q96AG4	307 aa	Known RBP	13.67	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	RNF39	Q9H2S5	420 aa		13.67	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	AFF2	P51816	1311 aa		13.65	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	IDI1	Q13907	227 aa		13.65	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	SLC26A8	Q96RN1	970 aa		13.65	□□□□□ -0.22
CSGALNACT1-215	ENST00000524112	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.64	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	KIF15	Q9NS87	1388 aa		13.64	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	PTPN23	Q9H3S7	1636 aa		13.64	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	RGS12	O14924	1447 aa		13.64	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	ZFYVE9	O95405	1425 aa		13.64	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	NHSL1	Q5SYE7	1610 aa		13.62	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	C14orf37	Q86TY3	774 aa		13.62	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	QTRT2	Q9H974	415 aa	Known RBP	13.62	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	BCAN	Q96GW7	911 aa		13.6	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	LRP5	O75197	1615 aa		13.6	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	CROCC2	H7BZ55	1655 aa		13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	TRPM2	O94759	1503 aa		13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	ASXL1	Q8IXJ9	1541 aa		13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	PTCH1	Q13635	1447 aa		13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	NUTM2E	B1AL46	878 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	PPP1R15A	O75807	674 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	BRINP3	Q76B58	766 aa		13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	TRPC5	Q9UL62	973 aa	Predicted RBP	13.59	□□□□□ -0.23
CSGALNACT1-215	ENST00000524112	LAMC1	P11047	1609 aa		13.57	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	EHMT2	Q96KQ7	1210 aa		13.57	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	ANKRD30A	Q9BXX3	1397 aa		13.57	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	RIMS2	Q9UQ26	1411 aa		13.56	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	C1QBP	Q07021	282 aa	Known RBP	13.56	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	NPM3	O75607	178 aa	Known RBP	13.55	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	TMEM131L	A2VDJ0	1609 aa		13.54	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.54	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	PNPLA6	Q8IY17	1366 aa		13.54	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	EP400	Q96L91	3159 aa		13.54	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	C8orf37	Q96NL8	207 aa		13.53	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	SPHKAP	Q2M3C7	1700 aa		13.53	□□□□□ -0.24
CSGALNACT1-215	ENST00000524112	BLM	P54132	1417 aa	Predicted RBP	13.52	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	MST1R	Q04912	1400 aa		13.52	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	ADAMTS13	Q76LX8	1427 aa		13.52	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	UNC13B	O14795	1591 aa		13.51	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	RBM33	Q96EV2	1170 aa	Known RBP	13.51	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	GCC2	Q8IWJ2	1684 aa		13.5	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	ATRN	O75882	1429 aa		13.5	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	ABCC5	O15440	1437 aa		13.49	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	USP21	Q9UK80	565 aa		13.49	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	XRN1	Q8IZH2	1706 aa	Known RBP	13.49	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.49	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	ADGRL3	Q9HAR2	1447 aa		13.48	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	SETBP1	Q9Y6X0	1596 aa		13.48	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	MYO5B	Q9ULV0	1848 aa		13.48	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	DAPK1	P53355	1430 aa		13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	IQGAP3	Q86VI3	1631 aa		13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	SF3B2	Q13435	895 aa	Known RBP	13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	RRP7BP	Q9NSQ0	103 aa		13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	AMOTL2	Q9Y2J4	779 aa		13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	ADGRL2	O95490	1459 aa		13.47	□□□□□ -0.25
CSGALNACT1-215	ENST00000524112	SOS2	Q07890	1332 aa	Predicted RBP	13.45	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	VPS8	Q8N3P4	1428 aa		13.45	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	PRAG1	Q86YV5	1406 aa		13.44	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	MARF1	Q9Y4F3	1742 aa	Known RBP	13.42	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	LRPPRC	P42704	1394 aa	Known RBP	13.41	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	ANKRD50	Q9ULJ7	1429 aa		13.4	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	GJD4	Q96KN9	370 aa	Predicted RBP	13.4	□□□□□ -0.26
CSGALNACT1-215	ENST00000524112	C1orf167	Q5SNV9	1468 aa		13.4	□□□□□ -0.26

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