RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
PCM1-220ENST00000523896 A0A0G2JS52 829 aa8.64□□□□□ -1.03
PCM1-220ENST00000523896 RCCD1A6NED2 376 aa8.64□□□□□ -1.03
PCM1-220ENST00000523896 RSPH4AQ5TD94 716 aa8.64□□□□□ -1.03
PCM1-220ENST00000523896 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
PCM1-220ENST00000523896 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
PCM1-220ENST00000523896 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
PCM1-220ENST00000523896 IL21Q9HBE4 155 aa8.62□□□□□ -1.03
PCM1-220ENST00000523896 RGS20O76081 388 aa8.61□□□□□ -1.03
PCM1-220ENST00000523896 APLP1P51693 650 aa8.6□□□□□ -1.03
PCM1-220ENST00000523896 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
PCM1-220ENST00000523896 MTRQ99707 1265 aa8.6□□□□□ -1.03
PCM1-220ENST00000523896 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
PCM1-220ENST00000523896 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
PCM1-220ENST00000523896 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
PCM1-220ENST00000523896 GPR37O15354 613 aa8.57□□□□□ -1.04
PCM1-220ENST00000523896 TJAP1Q5JTD0 557 aa8.57□□□□□ -1.04
PCM1-220ENST00000523896 CFHP08603 1231 aa8.56□□□□□ -1.04
PCM1-220ENST00000523896 FECHP22830 423 aa8.56□□□□□ -1.04
PCM1-220ENST00000523896 COPS2P61201 443 aa8.56□□□□□ -1.04
PCM1-220ENST00000523896 GGCXP38435 758 aa8.55□□□□□ -1.04
PCM1-220ENST00000523896 SULF1Q8IWU6 871 aa8.54□□□□□ -1.04
PCM1-220ENST00000523896 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
PCM1-220ENST00000523896 MAP2K5Q13163 448 aa8.53□□□□□ -1.04
PCM1-220ENST00000523896 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
PCM1-220ENST00000523896 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
PCM1-220ENST00000523896 ZMYND10O75800 440 aa8.52□□□□□ -1.05
PCM1-220ENST00000523896 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
PCM1-220ENST00000523896 ZNF516Q92618 1163 aa8.51□□□□□ -1.05
PCM1-220ENST00000523896 ZPR1O75312 459 aa8.5□□□□□ -1.05
PCM1-220ENST00000523896 NR1I2O75469 434 aa8.5□□□□□ -1.05
PCM1-220ENST00000523896 BLOC1S3Q6QNY0 202 aa8.5□□□□□ -1.05
PCM1-220ENST00000523896 MINK1Q8N4C8 1332 aaPredicted RBP8.5□□□□□ -1.05
PCM1-220ENST00000523896 SLC10A3P09131 477 aa8.49□□□□□ -1.05
PCM1-220ENST00000523896 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
PCM1-220ENST00000523896 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
PCM1-220ENST00000523896 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
PCM1-220ENST00000523896 IRF6O14896 467 aa8.47□□□□□ -1.05
PCM1-220ENST00000523896 NLRP7Q8WX94 980 aa8.47□□□□□ -1.05
PCM1-220ENST00000523896 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
PCM1-220ENST00000523896 PPP1R18Q6NYC8 613 aa8.46□□□□□ -1.06
PCM1-220ENST00000523896 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
PCM1-220ENST00000523896 GRIPAP1Q4V328 841 aa8.45□□□□□ -1.06
PCM1-220ENST00000523896 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
PCM1-220ENST00000523896 CCDC102AQ96A19 550 aa8.44□□□□□ -1.06
PCM1-220ENST00000523896 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
PCM1-220ENST00000523896 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
PCM1-220ENST00000523896 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
PCM1-220ENST00000523896 TLL1O43897 1013 aa8.42□□□□□ -1.06
PCM1-220ENST00000523896 ADH1BP00325 375 aa8.42□□□□□ -1.06
PCM1-220ENST00000523896 ATP6V1AP38606 617 aa8.42□□□□□ -1.06
PCM1-220ENST00000523896 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
PCM1-220ENST00000523896 PRKD2Q9BZL6 878 aa8.42□□□□□ -1.06
PCM1-220ENST00000523896 CLCN1P35523 988 aa8.41□□□□□ -1.06
PCM1-220ENST00000523896 GCGRP47871 477 aa8.41□□□□□ -1.06
PCM1-220ENST00000523896 FUT2Q10981 343 aa8.4□□□□□ -1.06
PCM1-220ENST00000523896 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
PCM1-220ENST00000523896 SCUBE3Q8IX30 993 aa8.39□□□□□ -1.07
PCM1-220ENST00000523896 AK7Q96M32 723 aa8.39□□□□□ -1.07
PCM1-220ENST00000523896 SLC6A16Q9GZN6 736 aa8.39□□□□□ -1.07
PCM1-220ENST00000523896 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
PCM1-220ENST00000523896 SPSB2Q99619 263 aa8.38□□□□□ -1.07
PCM1-220ENST00000523896 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
PCM1-220ENST00000523896 S1PR4O95977 384 aa8.37□□□□□ -1.07
PCM1-220ENST00000523896 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
PCM1-220ENST00000523896 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
PCM1-220ENST00000523896 MORN1Q5T089 497 aa8.37□□□□□ -1.07
PCM1-220ENST00000523896 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
PCM1-220ENST00000523896 CD46P15529 392 aa8.36□□□□□ -1.07
PCM1-220ENST00000523896 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
PCM1-220ENST00000523896 USP46P62068 366 aa8.36□□□□□ -1.07
PCM1-220ENST00000523896 Q3C1V9 767 aa8.36□□□□□ -1.07
PCM1-220ENST00000523896 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
PCM1-220ENST00000523896 KDM4AO75164 1064 aa8.35□□□□□ -1.07
PCM1-220ENST00000523896 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
PCM1-220ENST00000523896 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
PCM1-220ENST00000523896 TRIM66O15016 1216 aa8.33□□□□□ -1.08
PCM1-220ENST00000523896 SLC19A1P41440 591 aa8.33□□□□□ -1.08
PCM1-220ENST00000523896 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
PCM1-220ENST00000523896 NEUROD2Q15784 382 aa8.32□□□□□ -1.08
PCM1-220ENST00000523896 Q6ZNB5 142 aa8.32□□□□□ -1.08
PCM1-220ENST00000523896 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
PCM1-220ENST00000523896 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
PCM1-220ENST00000523896 GFRA3O60609 400 aa8.31□□□□□ -1.08
PCM1-220ENST00000523896 PDE4DQ08499 809 aa8.29□□□□□ -1.08
PCM1-220ENST00000523896 AMHR2Q16671 573 aa8.29□□□□□ -1.08
PCM1-220ENST00000523896 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
PCM1-220ENST00000523896 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
PCM1-220ENST00000523896 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
PCM1-220ENST00000523896 PDZRN3Q9UPQ7 1066 aa8.28□□□□□ -1.08
PCM1-220ENST00000523896 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
PCM1-220ENST00000523896 HOXA2O43364 376 aa8.27□□□□□ -1.09
PCM1-220ENST00000523896 TMEM132AQ24JP5 1023 aa8.27□□□□□ -1.09
PCM1-220ENST00000523896 MSS51Q4VC12 460 aa8.27□□□□□ -1.09
PCM1-220ENST00000523896 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
PCM1-220ENST00000523896 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
PCM1-220ENST00000523896 GIGYF2Q6Y7W6 1299 aaKnown RBP8.26□□□□□ -1.09
PCM1-220ENST00000523896 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
PCM1-220ENST00000523896 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
PCM1-220ENST00000523896 SPRYD7Q5W111 196 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms