RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1P4-201ENST00000523647 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
SMARCE1P4-201ENST00000523647 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
SMARCE1P4-201ENST00000523647 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1P4-201ENST00000523647 CLCN1P35523 988 aa9.26□□□□□ -0.93
SMARCE1P4-201ENST00000523647 BCAMP50895 628 aa9.26□□□□□ -0.93
SMARCE1P4-201ENST00000523647 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1P4-201ENST00000523647 PDE4DQ08499 809 aa9.26□□□□□ -0.93
SMARCE1P4-201ENST00000523647 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1P4-201ENST00000523647 HDGFP51858 240 aaKnown RBP9.25□□□□□ -0.93
SMARCE1P4-201ENST00000523647 SLF2Q8IX21 1173 aa9.25□□□□□ -0.93
SMARCE1P4-201ENST00000523647 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
SMARCE1P4-201ENST00000523647 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
SMARCE1P4-201ENST00000523647 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
SMARCE1P4-201ENST00000523647 TTLL12Q14166 644 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1P4-201ENST00000523647 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1P4-201ENST00000523647 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
SMARCE1P4-201ENST00000523647 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
SMARCE1P4-201ENST00000523647 GIGYF2Q6Y7W6 1299 aaKnown RBP9.21□□□□□ -0.94
SMARCE1P4-201ENST00000523647 SULF1Q8IWU6 871 aa9.21□□□□□ -0.94
SMARCE1P4-201ENST00000523647 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
SMARCE1P4-201ENST00000523647 SLC10A3P09131 477 aa9.2□□□□□ -0.94
SMARCE1P4-201ENST00000523647 RNF40O75150 1001 aa9.19□□□□□ -0.94
SMARCE1P4-201ENST00000523647 NECTIN2Q92692 538 aa9.19□□□□□ -0.94
SMARCE1P4-201ENST00000523647 DDX11L8A8MPP1 907 aa9.18□□□□□ -0.94
SMARCE1P4-201ENST00000523647 CD46P15529 392 aa9.18□□□□□ -0.94
SMARCE1P4-201ENST00000523647 WBP1LQ9NX94 342 aa9.18□□□□□ -0.94
SMARCE1P4-201ENST00000523647 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1P4-201ENST00000523647 PPP4CP60510 307 aa9.17□□□□□ -0.94
SMARCE1P4-201ENST00000523647 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1P4-201ENST00000523647 MS4A1P11836 297 aa9.16□□□□□ -0.94
SMARCE1P4-201ENST00000523647 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1P4-201ENST00000523647 PTPN5P54829 565 aa9.16□□□□□ -0.94
SMARCE1P4-201ENST00000523647 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
SMARCE1P4-201ENST00000523647 HCSTQ9UBK5 93 aa9.16□□□□□ -0.94
SMARCE1P4-201ENST00000523647 CFHP08603 1231 aa9.15□□□□□ -0.94
SMARCE1P4-201ENST00000523647 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
SMARCE1P4-201ENST00000523647 RDH13Q8NBN7 331 aa9.15□□□□□ -0.94
SMARCE1P4-201ENST00000523647 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
SMARCE1P4-201ENST00000523647 APLP1P51693 650 aa9.14□□□□□ -0.95
SMARCE1P4-201ENST00000523647 GCGRP47871 477 aa9.13□□□□□ -0.95
SMARCE1P4-201ENST00000523647 NEUROD2Q15784 382 aa9.13□□□□□ -0.95
SMARCE1P4-201ENST00000523647 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
SMARCE1P4-201ENST00000523647 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
SMARCE1P4-201ENST00000523647 KMT5BQ4FZB7 885 aa9.11□□□□□ -0.95
SMARCE1P4-201ENST00000523647 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
SMARCE1P4-201ENST00000523647 PLSCR2Q9NRY7 297 aa9.08□□□□□ -0.96
SMARCE1P4-201ENST00000523647 KDM4AO75164 1064 aa9.07□□□□□ -0.96
SMARCE1P4-201ENST00000523647 FAM117AQ9C073 453 aa9.07□□□□□ -0.96
SMARCE1P4-201ENST00000523647 USP46P62068 366 aa9.06□□□□□ -0.96
SMARCE1P4-201ENST00000523647 FUT2Q10981 343 aa9.06□□□□□ -0.96
SMARCE1P4-201ENST00000523647 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
SMARCE1P4-201ENST00000523647 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
SMARCE1P4-201ENST00000523647 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
SMARCE1P4-201ENST00000523647 HOXA2O43364 376 aa9.04□□□□□ -0.96
SMARCE1P4-201ENST00000523647 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
SMARCE1P4-201ENST00000523647 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 ATP6V1AP38606 617 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 MORN1Q5T089 497 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 MTRQ99707 1265 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
SMARCE1P4-201ENST00000523647 DIXDC1Q155Q3 683 aa9.02□□□□□ -0.97
SMARCE1P4-201ENST00000523647 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
SMARCE1P4-201ENST00000523647 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
SMARCE1P4-201ENST00000523647 GRIPAP1Q4V328 841 aa9.01□□□□□ -0.97
SMARCE1P4-201ENST00000523647 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
SMARCE1P4-201ENST00000523647 HLA-CQ95604 372 aa9□□□□□ -0.97
SMARCE1P4-201ENST00000523647 IL21Q9HBE4 155 aa9□□□□□ -0.97
SMARCE1P4-201ENST00000523647 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
SMARCE1P4-201ENST00000523647 GJA5P36382 358 aa8.99□□□□□ -0.97
SMARCE1P4-201ENST00000523647 COPS2P61201 443 aa8.99□□□□□ -0.97
SMARCE1P4-201ENST00000523647 NR1I2O75469 434 aa8.98□□□□□ -0.97
SMARCE1P4-201ENST00000523647 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
SMARCE1P4-201ENST00000523647 RSBN1LQ6PCB5 846 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1P4-201ENST00000523647 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
SMARCE1P4-201ENST00000523647 SLC27A5Q9Y2P5 690 aa8.98□□□□□ -0.97
SMARCE1P4-201ENST00000523647 SPTLC1O15269 473 aa8.97□□□□□ -0.97
SMARCE1P4-201ENST00000523647 ZPR1O75312 459 aa8.97□□□□□ -0.97
SMARCE1P4-201ENST00000523647 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
SMARCE1P4-201ENST00000523647 NDUFV2P19404 249 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 GUCA2AQ02747 115 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 ZNF516Q92618 1163 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1P4-201ENST00000523647 FDX1P10109 184 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 KCNC4Q03721 635 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 TUSC1Q2TAM9 212 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 THAP11Q96EK4 314 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 GOPCQ9HD26 462 aa8.95□□□□□ -0.98
SMARCE1P4-201ENST00000523647 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
SMARCE1P4-201ENST00000523647 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
SMARCE1P4-201ENST00000523647 Q3C1V9 767 aa8.94□□□□□ -0.98
SMARCE1P4-201ENST00000523647 LIMD1Q9UGP4 676 aa8.94□□□□□ -0.98
SMARCE1P4-201ENST00000523647 TLL1O43897 1013 aa8.93□□□□□ -0.98
SMARCE1P4-201ENST00000523647 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms