RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
CLK4-213ENST00000523013 NECTIN2Q92692 538 aa10.55□□□□□ -0.72
CLK4-213ENST00000523013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
CLK4-213ENST00000523013 RGS20O76081 388 aa10.53□□□□□ -0.72
CLK4-213ENST00000523013 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
CLK4-213ENST00000523013 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
CLK4-213ENST00000523013 ZNF516Q92618 1163 aa10.51□□□□□ -0.73
CLK4-213ENST00000523013 SLC10A3P09131 477 aa10.5□□□□□ -0.73
CLK4-213ENST00000523013 COPS2P61201 443 aa10.47□□□□□ -0.73
CLK4-213ENST00000523013 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
CLK4-213ENST00000523013 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
CLK4-213ENST00000523013 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
CLK4-213ENST00000523013 NLRP7Q8WX94 980 aa10.46□□□□□ -0.73
CLK4-213ENST00000523013 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
CLK4-213ENST00000523013 CFHP08603 1231 aa10.45□□□□□ -0.74
CLK4-213ENST00000523013 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
CLK4-213ENST00000523013 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
CLK4-213ENST00000523013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLK4-213ENST00000523013 KMT5BQ4FZB7 885 aa10.43□□□□□ -0.74
CLK4-213ENST00000523013 BLOC1S3Q6QNY0 202 aa10.43□□□□□ -0.74
CLK4-213ENST00000523013 DAXXQ9UER7 740 aaPredicted RBP10.43□□□□□ -0.74
CLK4-213ENST00000523013 ZPR1O75312 459 aa10.42□□□□□ -0.74
CLK4-213ENST00000523013 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
CLK4-213ENST00000523013 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
CLK4-213ENST00000523013 IRF6O14896 467 aa10.38□□□□□ -0.75
CLK4-213ENST00000523013 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.38□□□□□ -0.75
CLK4-213ENST00000523013 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
CLK4-213ENST00000523013 TLL1O43897 1013 aa10.37□□□□□ -0.75
CLK4-213ENST00000523013 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
CLK4-213ENST00000523013 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
CLK4-213ENST00000523013 LMOD2Q6P5Q4 547 aa10.36□□□□□ -0.75
CLK4-213ENST00000523013 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
CLK4-213ENST00000523013 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
CLK4-213ENST00000523013 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
CLK4-213ENST00000523013 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
CLK4-213ENST00000523013 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
CLK4-213ENST00000523013 NR1I2O75469 434 aa10.32□□□□□ -0.76
CLK4-213ENST00000523013 GCGRP47871 477 aa10.32□□□□□ -0.76
CLK4-213ENST00000523013 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
CLK4-213ENST00000523013 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
CLK4-213ENST00000523013 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
CLK4-213ENST00000523013 GGCXP38435 758 aa10.3□□□□□ -0.76
CLK4-213ENST00000523013 FUT2Q10981 343 aa10.3□□□□□ -0.76
CLK4-213ENST00000523013 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
CLK4-213ENST00000523013 ADH1BP00325 375 aa10.29□□□□□ -0.76
CLK4-213ENST00000523013 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
CLK4-213ENST00000523013 MORN1Q5T089 497 aa10.29□□□□□ -0.76
CLK4-213ENST00000523013 S1PR4O95977 384 aa10.28□□□□□ -0.76
CLK4-213ENST00000523013 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
CLK4-213ENST00000523013 CD46P15529 392 aa10.27□□□□□ -0.77
CLK4-213ENST00000523013 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
CLK4-213ENST00000523013 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
CLK4-213ENST00000523013 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
CLK4-213ENST00000523013 ZMYND10O75800 440 aa10.26□□□□□ -0.77
CLK4-213ENST00000523013 EMID1Q96A84 441 aaPredicted RBP10.25□□□□□ -0.77
CLK4-213ENST00000523013 THAP11Q96EK4 314 aa10.25□□□□□ -0.77
CLK4-213ENST00000523013 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
CLK4-213ENST00000523013 SPSB2Q99619 263 aa10.24□□□□□ -0.77
CLK4-213ENST00000523013 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
CLK4-213ENST00000523013 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
CLK4-213ENST00000523013 SLC6A16Q9GZN6 736 aa10.23□□□□□ -0.77
CLK4-213ENST00000523013 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
CLK4-213ENST00000523013 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
CLK4-213ENST00000523013 CLCN1P35523 988 aa10.21□□□□□ -0.77
CLK4-213ENST00000523013 KRI1Q8N9T8 703 aaKnown RBP10.21□□□□□ -0.77
CLK4-213ENST00000523013 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
CLK4-213ENST00000523013 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
CLK4-213ENST00000523013 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
CLK4-213ENST00000523013 FAM160A2Q8N612 972 aaPredicted RBP10.19□□□□□ -0.78
CLK4-213ENST00000523013 KDM4AO75164 1064 aa10.18□□□□□ -0.78
CLK4-213ENST00000523013 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
CLK4-213ENST00000523013 SLC19A1P41440 591 aa10.18□□□□□ -0.78
CLK4-213ENST00000523013 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
CLK4-213ENST00000523013 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
CLK4-213ENST00000523013 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
CLK4-213ENST00000523013 GFRA3O60609 400 aa10.17□□□□□ -0.78
CLK4-213ENST00000523013 LIAT1Q6ZQX7 453 aa10.17□□□□□ -0.78
CLK4-213ENST00000523013 HLA-CQ95604 372 aa10.16□□□□□ -0.78
CLK4-213ENST00000523013 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
CLK4-213ENST00000523013 AMHR2Q16671 573 aa10.15□□□□□ -0.78
CLK4-213ENST00000523013 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
CLK4-213ENST00000523013 HOXA2O43364 376 aa10.14□□□□□ -0.79
CLK4-213ENST00000523013 USP46P62068 366 aa10.14□□□□□ -0.79
CLK4-213ENST00000523013 PRDM9Q9NQV7 894 aa10.14□□□□□ -0.79
CLK4-213ENST00000523013 MSS51Q4VC12 460 aa10.13□□□□□ -0.79
CLK4-213ENST00000523013 Q6ZNB5 142 aa10.13□□□□□ -0.79
CLK4-213ENST00000523013 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
CLK4-213ENST00000523013 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
CLK4-213ENST00000523013 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
CLK4-213ENST00000523013 Q3C1V9 767 aa10.12□□□□□ -0.79
CLK4-213ENST00000523013 LCE2BO14633 110 aa10.11□□□□□ -0.79
CLK4-213ENST00000523013 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
CLK4-213ENST00000523013 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
CLK4-213ENST00000523013 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
CLK4-213ENST00000523013 FCF1Q9Y324 198 aaKnown RBP10.11□□□□□ -0.79
CLK4-213ENST00000523013 TRIM66O15016 1216 aa10.1□□□□□ -0.79
CLK4-213ENST00000523013 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
CLK4-213ENST00000523013 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
CLK4-213ENST00000523013 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
CLK4-213ENST00000523013 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms