RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
PCM1-216ENST00000522777 PSEN2P49810 448 aa11.87□□□□□ -0.51
PCM1-216ENST00000522777 LHX8Q68G74 356 aa11.86□□□□□ -0.51
PCM1-216ENST00000522777 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
PCM1-216ENST00000522777 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
PCM1-216ENST00000522777 SULF1Q8IWU6 871 aa11.85□□□□□ -0.51
PCM1-216ENST00000522777 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
PCM1-216ENST00000522777 DIXDC1Q155Q3 683 aa11.84□□□□□ -0.51
PCM1-216ENST00000522777 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
PCM1-216ENST00000522777 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
PCM1-216ENST00000522777 ERBB3P21860 1342 aa11.84□□□□□ -0.51
PCM1-216ENST00000522777 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
PCM1-216ENST00000522777 MCM6Q14566 821 aa11.83□□□□□ -0.52
PCM1-216ENST00000522777 LIMD1Q9UGP4 676 aa11.83□□□□□ -0.52
PCM1-216ENST00000522777 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
PCM1-216ENST00000522777 ST18O60284 1047 aa11.82□□□□□ -0.52
PCM1-216ENST00000522777 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
PCM1-216ENST00000522777 SLC4A5Q9BY07 1137 aa11.82□□□□□ -0.52
PCM1-216ENST00000522777 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
PCM1-216ENST00000522777 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
PCM1-216ENST00000522777 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
PCM1-216ENST00000522777 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
PCM1-216ENST00000522777 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
PCM1-216ENST00000522777 SPTLC1O15269 473 aa11.78□□□□□ -0.52
PCM1-216ENST00000522777 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
PCM1-216ENST00000522777 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
PCM1-216ENST00000522777 RIC3Q7Z5B4 369 aa11.78□□□□□ -0.52
PCM1-216ENST00000522777 ARXQ96QS3 562 aa11.78□□□□□ -0.52
PCM1-216ENST00000522777 PBX2P40425 430 aa11.77□□□□□ -0.53
PCM1-216ENST00000522777 EMP3P54852 163 aa11.77□□□□□ -0.53
PCM1-216ENST00000522777 PPP2R2DQ66LE6 453 aa11.77□□□□□ -0.53
PCM1-216ENST00000522777 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
PCM1-216ENST00000522777 RFC5P40937 340 aa11.76□□□□□ -0.53
PCM1-216ENST00000522777 NUTM1Q86Y26 1132 aa11.76□□□□□ -0.53
PCM1-216ENST00000522777 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
PCM1-216ENST00000522777 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
PCM1-216ENST00000522777 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
PCM1-216ENST00000522777 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
PCM1-216ENST00000522777 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
PCM1-216ENST00000522777 VPS9D1Q9Y2B5 631 aa11.75□□□□□ -0.53
PCM1-216ENST00000522777 CUX2O14529 1486 aa11.75□□□□□ -0.53
PCM1-216ENST00000522777 SLC10A3P09131 477 aa11.74□□□□□ -0.53
PCM1-216ENST00000522777 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
PCM1-216ENST00000522777 NDUFV2P19404 249 aa11.73□□□□□ -0.53
PCM1-216ENST00000522777 GJA5P36382 358 aa11.73□□□□□ -0.53
PCM1-216ENST00000522777 GCGRP47871 477 aa11.73□□□□□ -0.53
PCM1-216ENST00000522777 CLUAP1Q96AJ1 413 aa11.73□□□□□ -0.53
PCM1-216ENST00000522777 A6NJR5 290 aa11.72□□□□□ -0.53
PCM1-216ENST00000522777 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
PCM1-216ENST00000522777 KDM4AO75164 1064 aa11.71□□□□□ -0.53
PCM1-216ENST00000522777 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
PCM1-216ENST00000522777 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
PCM1-216ENST00000522777 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
PCM1-216ENST00000522777 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
PCM1-216ENST00000522777 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
PCM1-216ENST00000522777 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
PCM1-216ENST00000522777 SPDYE5A6NIY4 337 aa11.7□□□□□ -0.54
PCM1-216ENST00000522777 QPCTQ16769 361 aa11.7□□□□□ -0.54
PCM1-216ENST00000522777 HOXA2O43364 376 aa11.69□□□□□ -0.54
PCM1-216ENST00000522777 LILRB3O75022 631 aa11.69□□□□□ -0.54
PCM1-216ENST00000522777 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
PCM1-216ENST00000522777 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
PCM1-216ENST00000522777 USP46P62068 366 aa11.68□□□□□ -0.54
PCM1-216ENST00000522777 CSPP1Q1MSJ5 1256 aa11.68□□□□□ -0.54
PCM1-216ENST00000522777 TMEM259Q4ZIN3 620 aa11.67□□□□□ -0.54
PCM1-216ENST00000522777 LAPTM4BQ86VI4 370 aa11.67□□□□□ -0.54
PCM1-216ENST00000522777 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
PCM1-216ENST00000522777 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
PCM1-216ENST00000522777 SNRKQ9NRH2 765 aa11.67□□□□□ -0.54
PCM1-216ENST00000522777 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
PCM1-216ENST00000522777 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
PCM1-216ENST00000522777 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
PCM1-216ENST00000522777 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
PCM1-216ENST00000522777 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
PCM1-216ENST00000522777 TK2O00142 265 aa11.64□□□□□ -0.55
PCM1-216ENST00000522777 TRAK2O60296 914 aa11.64□□□□□ -0.55
PCM1-216ENST00000522777 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
PCM1-216ENST00000522777 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
PCM1-216ENST00000522777 HLA-CQ95604 372 aa11.64□□□□□ -0.55
PCM1-216ENST00000522777 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
PCM1-216ENST00000522777 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
PCM1-216ENST00000522777 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
PCM1-216ENST00000522777 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
PCM1-216ENST00000522777 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
PCM1-216ENST00000522777 FDX1P10109 184 aa11.62□□□□□ -0.55
PCM1-216ENST00000522777 GUCA2AQ02747 115 aa11.62□□□□□ -0.55
PCM1-216ENST00000522777 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
PCM1-216ENST00000522777 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
PCM1-216ENST00000522777 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
PCM1-216ENST00000522777 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
PCM1-216ENST00000522777 SOCS7O14512 581 aa11.61□□□□□ -0.55
PCM1-216ENST00000522777 CFHP08603 1231 aa11.61□□□□□ -0.55
PCM1-216ENST00000522777 HRCP23327 699 aa11.61□□□□□ -0.55
PCM1-216ENST00000522777 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
PCM1-216ENST00000522777 ZFRQ96KR1 1074 aaKnown RBP11.61□□□□□ -0.55
PCM1-216ENST00000522777 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
PCM1-216ENST00000522777 ZBTB3Q9H5J0 574 aa11.6□□□□□ -0.55
PCM1-216ENST00000522777 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
PCM1-216ENST00000522777 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
PCM1-216ENST00000522777 APBB1O00213 710 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms