RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CPLX2Q6PUV4 134 aaKnown RBP20.04■□□□□ 0.8
PCDHA3-201ENST00000522353 SF3A1Q15459 793 aaKnown RBP20.04■□□□□ 0.8
PCDHA3-201ENST00000522353 THEMISQ8N1K5 641 aaPredicted RBP20.04■□□□□ 0.8
PCDHA3-201ENST00000522353 PROSER2Q86WR7 435 aaPredicted RBP20.04■□□□□ 0.8
PCDHA3-201ENST00000522353 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
PCDHA3-201ENST00000522353 RUFY2Q8WXA3 655 aa20.03■□□□□ 0.8
PCDHA3-201ENST00000522353 DEKP35659 375 aaKnown RBP20.03■□□□□ 0.8
PCDHA3-201ENST00000522353 DIAPH3Q9NSV4 1193 aa20.03■□□□□ 0.8
PCDHA3-201ENST00000522353 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.8
PCDHA3-201ENST00000522353 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
PCDHA3-201ENST00000522353 FKBP5Q13451 457 aaPredicted RBP20.02■□□□□ 0.79
PCDHA3-201ENST00000522353 ROCK1Q13464 1354 aa20.01■□□□□ 0.79
PCDHA3-201ENST00000522353 GNAI1P63096 354 aa20.01■□□□□ 0.79
PCDHA3-201ENST00000522353 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
PCDHA3-201ENST00000522353 DDX19BQ9UMR2 479 aa20.01■□□□□ 0.79
PCDHA3-201ENST00000522353 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
PCDHA3-201ENST00000522353 IFIT2P09913 472 aaKnown RBP20■□□□□ 0.79
PCDHA3-201ENST00000522353 TSPYL4Q9UJ04 414 aa20■□□□□ 0.79
PCDHA3-201ENST00000522353 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 G3BP1Q13283 466 aaKnown RBP eCLIP19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
PCDHA3-201ENST00000522353 FAM184AQ8NB25 1140 aa19.98■□□□□ 0.79
PCDHA3-201ENST00000522353 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
PCDHA3-201ENST00000522353 H3BQV1 296 aa19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 IFFO2Q5TF58 517 aa19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 GZF1Q9H116 711 aaPredicted RBP19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 RRBP1Q9P2E9 1410 aaKnown RBP19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 HSP90AB4PQ58FF6 505 aa19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 NECTIN2Q92692 538 aa19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 IPO9Q96P70 1041 aaKnown RBP19.97■□□□□ 0.79
PCDHA3-201ENST00000522353 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
PCDHA3-201ENST00000522353 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
PCDHA3-201ENST00000522353 ESCO1Q5FWF5 840 aa19.96■□□□□ 0.79
PCDHA3-201ENST00000522353 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
PCDHA3-201ENST00000522353 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
PCDHA3-201ENST00000522353 ATP6V1DQ9Y5K8 247 aa19.95■□□□□ 0.78
PCDHA3-201ENST00000522353 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
PCDHA3-201ENST00000522353 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 APPP05067 770 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 TCEAL9Q9UHQ7 104 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
PCDHA3-201ENST00000522353 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 CEP89Q96ST8 783 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 PHF14O94880 888 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 NOC3LQ8WTT2 800 aaKnown RBP19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 REC8O95072 547 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 TRDNQ13061 729 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 RIC3Q7Z5B4 369 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 GOLGA6L3A6NEY3 463 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
PCDHA3-201ENST00000522353 RAD21O60216 631 aa19.92■□□□□ 0.78
PCDHA3-201ENST00000522353 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
PCDHA3-201ENST00000522353 FBXW7Q969H0 707 aa19.92■□□□□ 0.78
PCDHA3-201ENST00000522353 HMOX1P09601 288 aa19.92■□□□□ 0.78
PCDHA3-201ENST00000522353 ZBED9Q6R2W3 1325 aa19.91■□□□□ 0.78
PCDHA3-201ENST00000522353 POGZQ7Z3K3 1410 aa19.91■□□□□ 0.78
PCDHA3-201ENST00000522353 CREBRFQ8IUR6 639 aa19.91■□□□□ 0.78
PCDHA3-201ENST00000522353 CFTRP13569 1480 aa19.9■□□□□ 0.78
PCDHA3-201ENST00000522353 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
PCDHA3-201ENST00000522353 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
PCDHA3-201ENST00000522353 RNF20Q5VTR2 975 aa19.9■□□□□ 0.78
PCDHA3-201ENST00000522353 TRIM29Q14134 588 aa19.89■□□□□ 0.78
PCDHA3-201ENST00000522353 PLEKHO1Q53GL0 409 aaPredicted RBP19.89■□□□□ 0.77
PCDHA3-201ENST00000522353 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.89■□□□□ 0.77
PCDHA3-201ENST00000522353 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
PCDHA3-201ENST00000522353 ANKLE2Q86XL3 938 aa19.89■□□□□ 0.77
PCDHA3-201ENST00000522353 CFAP70Q5T0N1 1121 aa19.89■□□□□ 0.77
PCDHA3-201ENST00000522353 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
PCDHA3-201ENST00000522353 CPLX1O14810 134 aa19.88■□□□□ 0.77
PCDHA3-201ENST00000522353 DHX16O60231 1041 aaKnown RBP19.88■□□□□ 0.77
PCDHA3-201ENST00000522353 USP35Q9P2H5 1018 aa19.87■□□□□ 0.77
PCDHA3-201ENST00000522353 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
PCDHA3-201ENST00000522353 HFM1A2PYH4 1435 aa19.87■□□□□ 0.77
PCDHA3-201ENST00000522353 ERC2O15083 957 aa19.87■□□□□ 0.77
PCDHA3-201ENST00000522353 TPM3P06753 285 aa19.86■□□□□ 0.77
PCDHA3-201ENST00000522353 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
PCDHA3-201ENST00000522353 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
PCDHA3-201ENST00000522353 PLIN1O60240 522 aa19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 AIMP1Q12904 312 aaKnown RBP19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 ERICH2A1L162 156 aa19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 SF3B2Q13435 895 aaKnown RBP19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 SMG6Q86US8 1419 aaKnown RBP19.85■□□□□ 0.77
PCDHA3-201ENST00000522353 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
PCDHA3-201ENST00000522353 PRAM1Q96QH2 718 aa19.84■□□□□ 0.77
PCDHA3-201ENST00000522353 CWC22Q9HCG8 908 aaKnown RBP19.84■□□□□ 0.77
PCDHA3-201ENST00000522353 DDX11L8A8MPP1 907 aa19.84■□□□□ 0.77
PCDHA3-201ENST00000522353 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
PCDHA3-201ENST00000522353 CRBNQ96SW2 442 aa19.83■□□□□ 0.76
PCDHA3-201ENST00000522353 MCTP1Q6DN14 999 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 CCDC47Q96A33 483 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms