RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
CTNNA1-234ENST00000522227 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
CTNNA1-234ENST00000522227 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.44
CTNNA1-234ENST00000522227 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
CTNNA1-234ENST00000522227 ARHGEF5Q12774 1597 aa17.82■□□□□ 0.44
CTNNA1-234ENST00000522227 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
CTNNA1-234ENST00000522227 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
CTNNA1-234ENST00000522227 ATF3P18847 181 aa17.79■□□□□ 0.44
CTNNA1-234ENST00000522227 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
CTNNA1-234ENST00000522227 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CTNNA1-234ENST00000522227 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.44
CTNNA1-234ENST00000522227 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.43
CTNNA1-234ENST00000522227 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
CTNNA1-234ENST00000522227 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
CTNNA1-234ENST00000522227 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
CTNNA1-234ENST00000522227 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
CTNNA1-234ENST00000522227 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
CTNNA1-234ENST00000522227 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 CHD2O14647 1828 aaKnown RBP17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 RRP7BPQ9NSQ0 103 aa17.72■□□□□ 0.43
CTNNA1-234ENST00000522227 DDX17Q92841 729 aaKnown RBP17.71■□□□□ 0.43
CTNNA1-234ENST00000522227 DUOX2Q9NRD8 1548 aa17.71■□□□□ 0.43
CTNNA1-234ENST00000522227 KANK1Q14678 1352 aa17.69■□□□□ 0.42
CTNNA1-234ENST00000522227 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
CTNNA1-234ENST00000522227 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
CTNNA1-234ENST00000522227 PLEKHG1Q9ULL1 1385 aa17.67■□□□□ 0.42
CTNNA1-234ENST00000522227 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
CTNNA1-234ENST00000522227 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
CTNNA1-234ENST00000522227 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
CTNNA1-234ENST00000522227 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
CTNNA1-234ENST00000522227 TBX22Q9Y458 520 aa17.65■□□□□ 0.42
CTNNA1-234ENST00000522227 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
CTNNA1-234ENST00000522227 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
CTNNA1-234ENST00000522227 USP21Q9UK80 565 aa17.64■□□□□ 0.41
CTNNA1-234ENST00000522227 PNPLA6Q8IY17 1366 aa17.64■□□□□ 0.41
CTNNA1-234ENST00000522227 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
CTNNA1-234ENST00000522227 ERBINQ96RT1 1412 aa17.62■□□□□ 0.41
CTNNA1-234ENST00000522227 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
CTNNA1-234ENST00000522227 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
CTNNA1-234ENST00000522227 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
CTNNA1-234ENST00000522227 NOS1P29475 1434 aa17.61■□□□□ 0.41
CTNNA1-234ENST00000522227 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
CTNNA1-234ENST00000522227 AMOTL2Q9Y2J4 779 aa17.6■□□□□ 0.41
CTNNA1-234ENST00000522227 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
CTNNA1-234ENST00000522227 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
CTNNA1-234ENST00000522227 CCDC125Q86Z20 511 aa17.57■□□□□ 0.4
CTNNA1-234ENST00000522227 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
CTNNA1-234ENST00000522227 NHSL1Q5SYE7 1610 aa17.57■□□□□ 0.4
CTNNA1-234ENST00000522227 MST1RQ04912 1400 aa17.56■□□□□ 0.4
CTNNA1-234ENST00000522227 GCC2Q8IWJ2 1684 aa17.56■□□□□ 0.4
CTNNA1-234ENST00000522227 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
CTNNA1-234ENST00000522227 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
CTNNA1-234ENST00000522227 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTNNA1-234ENST00000522227 LMTK2Q8IWU2 1503 aa17.55■□□□□ 0.4
CTNNA1-234ENST00000522227 ABCC5O15440 1437 aa17.53■□□□□ 0.4
CTNNA1-234ENST00000522227 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.4
CTNNA1-234ENST00000522227 ATRNO75882 1429 aa17.52■□□□□ 0.4
CTNNA1-234ENST00000522227 DCCP43146 1447 aa17.51■□□□□ 0.39
CTNNA1-234ENST00000522227 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
CTNNA1-234ENST00000522227 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
CTNNA1-234ENST00000522227 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
CTNNA1-234ENST00000522227 EP400Q96L91 3159 aa17.49■□□□□ 0.39
CTNNA1-234ENST00000522227 TRPM2O94759 1503 aa17.49■□□□□ 0.39
CTNNA1-234ENST00000522227 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
CTNNA1-234ENST00000522227 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
CTNNA1-234ENST00000522227 SF3B2Q13435 895 aaKnown RBP17.48■□□□□ 0.39
CTNNA1-234ENST00000522227 LRP5O75197 1615 aa17.47■□□□□ 0.39
CTNNA1-234ENST00000522227 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CTNNA1-234ENST00000522227 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
CTNNA1-234ENST00000522227 DAPK1P53355 1430 aa17.45■□□□□ 0.38
CTNNA1-234ENST00000522227 ANKRD30AQ9BXX3 1397 aa17.44■□□□□ 0.38
CTNNA1-234ENST00000522227 PTCH1Q13635 1447 aa17.44■□□□□ 0.38
CTNNA1-234ENST00000522227 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
CTNNA1-234ENST00000522227 HRCP23327 699 aa17.42■□□□□ 0.38
CTNNA1-234ENST00000522227 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
CTNNA1-234ENST00000522227 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
CTNNA1-234ENST00000522227 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
CTNNA1-234ENST00000522227 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
CTNNA1-234ENST00000522227 YY1P25490 414 aa17.4■□□□□ 0.38
CTNNA1-234ENST00000522227 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
CTNNA1-234ENST00000522227 UNC13BO14795 1591 aa17.4■□□□□ 0.38
CTNNA1-234ENST00000522227 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.38
CTNNA1-234ENST00000522227 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
CTNNA1-234ENST00000522227 METP08581 1390 aa17.39■□□□□ 0.37
CTNNA1-234ENST00000522227 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
CTNNA1-234ENST00000522227 XPCQ01831 940 aaPredicted RBP17.36■□□□□ 0.37
CTNNA1-234ENST00000522227 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
CTNNA1-234ENST00000522227 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
CTNNA1-234ENST00000522227 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
CTNNA1-234ENST00000522227 GLI3P10071 1580 aa17.33■□□□□ 0.37
CTNNA1-234ENST00000522227 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
CTNNA1-234ENST00000522227 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
CTNNA1-234ENST00000522227 NRXN3Q9Y4C0 1643 aa17.32■□□□□ 0.36
CTNNA1-234ENST00000522227 MYOM2P54296 1465 aa17.32■□□□□ 0.36
CTNNA1-234ENST00000522227 BAG6P46379 1132 aa17.32■□□□□ 0.36
CTNNA1-234ENST00000522227 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
CTNNA1-234ENST00000522227 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms