RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-209ENST00000521977 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
SHPRH-209ENST00000521977 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHPRH-209ENST00000521977 UHRF1BP1Q6BDS2 1440 aa13.65□□□□□ -0.22
SHPRH-209ENST00000521977 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
SHPRH-209ENST00000521977 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
SHPRH-209ENST00000521977 SYNMO15061 1565 aa13.64□□□□□ -0.23
SHPRH-209ENST00000521977 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
SHPRH-209ENST00000521977 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
SHPRH-209ENST00000521977 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
SHPRH-209ENST00000521977 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-209ENST00000521977 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
SHPRH-209ENST00000521977 ERVK-7P63135 1459 aa13.61□□□□□ -0.23
SHPRH-209ENST00000521977 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
SHPRH-209ENST00000521977 MROH2AA6NES4 1674 aa13.61□□□□□ -0.23
SHPRH-209ENST00000521977 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
SHPRH-209ENST00000521977 KIF1BO60333 1816 aa13.61□□□□□ -0.23
SHPRH-209ENST00000521977 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
SHPRH-209ENST00000521977 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
SHPRH-209ENST00000521977 MLECQ14165 292 aa13.6□□□□□ -0.23
SHPRH-209ENST00000521977 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
SHPRH-209ENST00000521977 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
SHPRH-209ENST00000521977 ZMYM3Q14202 1370 aa13.58□□□□□ -0.23
SHPRH-209ENST00000521977 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
SHPRH-209ENST00000521977 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
SHPRH-209ENST00000521977 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
SHPRH-209ENST00000521977 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
SHPRH-209ENST00000521977 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
SHPRH-209ENST00000521977 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-209ENST00000521977 MYOM2P54296 1465 aa13.55□□□□□ -0.24
SHPRH-209ENST00000521977 IDI1Q13907 227 aa13.55□□□□□ -0.24
SHPRH-209ENST00000521977 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
SHPRH-209ENST00000521977 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
SHPRH-209ENST00000521977 TRPM1Q7Z4N2 1603 aa13.54□□□□□ -0.24
SHPRH-209ENST00000521977 MADDQ8WXG6 1647 aa13.54□□□□□ -0.24
SHPRH-209ENST00000521977 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
SHPRH-209ENST00000521977 TMEM131LA2VDJ0 1609 aa13.53□□□□□ -0.24
SHPRH-209ENST00000521977 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
SHPRH-209ENST00000521977 NRXN1Q9ULB1 1477 aa13.53□□□□□ -0.24
SHPRH-209ENST00000521977 PPLO60437 1756 aa13.52□□□□□ -0.25
SHPRH-209ENST00000521977 C3P01024 1663 aa13.51□□□□□ -0.25
SHPRH-209ENST00000521977 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
SHPRH-209ENST00000521977 LAMC1P11047 1609 aa13.51□□□□□ -0.25
SHPRH-209ENST00000521977 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
SHPRH-209ENST00000521977 NEXMIFQ5QGS0 1516 aa13.5□□□□□ -0.25
SHPRH-209ENST00000521977 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
SHPRH-209ENST00000521977 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
SHPRH-209ENST00000521977 TNRQ92752 1358 aa13.49□□□□□ -0.25
SHPRH-209ENST00000521977 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
SHPRH-209ENST00000521977 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHPRH-209ENST00000521977 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
SHPRH-209ENST00000521977 KDM5AP29375 1690 aaKnown RBP13.48□□□□□ -0.25
SHPRH-209ENST00000521977 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
SHPRH-209ENST00000521977 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
SHPRH-209ENST00000521977 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
SHPRH-209ENST00000521977 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
SHPRH-209ENST00000521977 ADGRF5Q8IZF2 1346 aa13.47□□□□□ -0.25
SHPRH-209ENST00000521977 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
SHPRH-209ENST00000521977 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
SHPRH-209ENST00000521977 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
SHPRH-209ENST00000521977 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
SHPRH-209ENST00000521977 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
SHPRH-209ENST00000521977 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
SHPRH-209ENST00000521977 USP47Q96K76 1375 aa13.45□□□□□ -0.26
SHPRH-209ENST00000521977 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-209ENST00000521977 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
SHPRH-209ENST00000521977 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
SHPRH-209ENST00000521977 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
SHPRH-209ENST00000521977 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
SHPRH-209ENST00000521977 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
SHPRH-209ENST00000521977 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
SHPRH-209ENST00000521977 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
SHPRH-209ENST00000521977 CFAP70Q5T0N1 1121 aa13.4□□□□□ -0.26
SHPRH-209ENST00000521977 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
SHPRH-209ENST00000521977 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
SHPRH-209ENST00000521977 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
SHPRH-209ENST00000521977 HAX1O00165 279 aa13.39□□□□□ -0.27
SHPRH-209ENST00000521977 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
SHPRH-209ENST00000521977 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
SHPRH-209ENST00000521977 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
SHPRH-209ENST00000521977 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
SHPRH-209ENST00000521977 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
SHPRH-209ENST00000521977 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
SHPRH-209ENST00000521977 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHPRH-209ENST00000521977 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
SHPRH-209ENST00000521977 SLIT1O75093 1534 aa13.36□□□□□ -0.27
SHPRH-209ENST00000521977 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
SHPRH-209ENST00000521977 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
SHPRH-209ENST00000521977 PTPRMP28827 1452 aa13.36□□□□□ -0.27
SHPRH-209ENST00000521977 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-209ENST00000521977 SETD1BQ9UPS6 1966 aaKnown RBP13.35□□□□□ -0.27
SHPRH-209ENST00000521977 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-209ENST00000521977 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-209ENST00000521977 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
SHPRH-209ENST00000521977 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-209ENST00000521977 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
SHPRH-209ENST00000521977 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
SHPRH-209ENST00000521977 ALKQ9UM73 1620 aa13.34□□□□□ -0.27
SHPRH-209ENST00000521977 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
SHPRH-209ENST00000521977 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms