RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 AGLP35573 1532 aa25.4■■□□□ 1.66
TRAPPC9-210ENST00000521667 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
TRAPPC9-210ENST00000521667 ADGRF5Q8IZF2 1346 aa25.4■■□□□ 1.66
TRAPPC9-210ENST00000521667 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
TRAPPC9-210ENST00000521667 MLECQ14165 292 aa25.38■■□□□ 1.65
TRAPPC9-210ENST00000521667 DISP3Q9P2K9 1392 aa25.38■■□□□ 1.65
TRAPPC9-210ENST00000521667 SYNMO15061 1565 aa25.38■■□□□ 1.65
TRAPPC9-210ENST00000521667 TMF1P82094 1093 aa25.37■■□□□ 1.65
TRAPPC9-210ENST00000521667 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
TRAPPC9-210ENST00000521667 CCDC184Q52MB2 194 aa25.36■■□□□ 1.65
TRAPPC9-210ENST00000521667 RPGRIP1LQ68CZ1 1315 aa25.35■■□□□ 1.65
TRAPPC9-210ENST00000521667 CFAP70Q5T0N1 1121 aa25.34■■□□□ 1.65
TRAPPC9-210ENST00000521667 EIF3AQ14152 1382 aaKnown RBP25.33■■□□□ 1.65
TRAPPC9-210ENST00000521667 MRS2Q9HD23 443 aa25.33■■□□□ 1.65
TRAPPC9-210ENST00000521667 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
TRAPPC9-210ENST00000521667 PPLO60437 1756 aa25.31■■□□□ 1.64
TRAPPC9-210ENST00000521667 CLTCQ00610 1675 aaKnown RBP25.3■■□□□ 1.64
TRAPPC9-210ENST00000521667 SLC52A1Q9NWF4 448 aa25.29■■□□□ 1.64
TRAPPC9-210ENST00000521667 PIK3C2GO75747 1445 aa25.28■■□□□ 1.64
TRAPPC9-210ENST00000521667 PREX1Q8TCU6 1659 aa25.28■■□□□ 1.64
TRAPPC9-210ENST00000521667 KTN1Q86UP2 1357 aaKnown RBP25.27■■□□□ 1.64
TRAPPC9-210ENST00000521667 IDI1Q13907 227 aa25.26■■□□□ 1.63
TRAPPC9-210ENST00000521667 SETBP1Q9Y6X0 1596 aa25.26■■□□□ 1.63
TRAPPC9-210ENST00000521667 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
TRAPPC9-210ENST00000521667 HNRNPUQ00839 825 aaKnown RBP eCLIP25.24■■□□□ 1.63
TRAPPC9-210ENST00000521667 CDCA8Q53HL2 280 aa25.24■■□□□ 1.63
TRAPPC9-210ENST00000521667 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC9-210ENST00000521667 C14orf93Q9H972 538 aaKnown RBP25.23■■□□□ 1.63
TRAPPC9-210ENST00000521667 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
TRAPPC9-210ENST00000521667 RALBP1Q15311 655 aa25.22■■□□□ 1.63
TRAPPC9-210ENST00000521667 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC9-210ENST00000521667 ERVK-7P63135 1459 aa25.22■■□□□ 1.63
TRAPPC9-210ENST00000521667 FAM9BQ8IZU0 186 aa25.21■■□□□ 1.63
TRAPPC9-210ENST00000521667 VGFO15240 615 aaPredicted RBP25.2■■□□□ 1.63
TRAPPC9-210ENST00000521667 SLC24A1O60721 1099 aa25.2■■□□□ 1.63
TRAPPC9-210ENST00000521667 PANK3Q9H999 370 aa25.19■■□□□ 1.62
TRAPPC9-210ENST00000521667 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
TRAPPC9-210ENST00000521667 MYBBP1AQ9BQG0 1328 aaKnown RBP25.17■■□□□ 1.62
TRAPPC9-210ENST00000521667 TMEM131LA2VDJ0 1609 aa25.17■■□□□ 1.62
TRAPPC9-210ENST00000521667 MYO3AQ8NEV4 1616 aa25.16■■□□□ 1.62
TRAPPC9-210ENST00000521667 ZFYVE9O95405 1425 aa25.16■■□□□ 1.62
TRAPPC9-210ENST00000521667 PARD3Q8TEW0 1356 aa25.15■■□□□ 1.62
TRAPPC9-210ENST00000521667 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
TRAPPC9-210ENST00000521667 SBNO2Q9Y2G9 1366 aa25.14■■□□□ 1.62
TRAPPC9-210ENST00000521667 NUTM2DQ5VT03 806 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC9-210ENST00000521667 BRD4O60885 1362 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC9-210ENST00000521667 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
TRAPPC9-210ENST00000521667 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC9-210ENST00000521667 ZMYM3Q14202 1370 aa25.11■■□□□ 1.61
TRAPPC9-210ENST00000521667 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
TRAPPC9-210ENST00000521667 KDM5AP29375 1690 aaKnown RBP25.1■■□□□ 1.61
TRAPPC9-210ENST00000521667 TMEM132EQ6IEE7 984 aa25.09■■□□□ 1.61
TRAPPC9-210ENST00000521667 TRAK1Q9UPV9 953 aa25.09■■□□□ 1.61
TRAPPC9-210ENST00000521667 MYO5BQ9ULV0 1848 aa25.08■■□□□ 1.61
TRAPPC9-210ENST00000521667 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
TRAPPC9-210ENST00000521667 MYOM1P52179 1685 aa25.06■■□□□ 1.6
TRAPPC9-210ENST00000521667 NLRP13Q86W25 1043 aa25.06■■□□□ 1.6
TRAPPC9-210ENST00000521667 CC2D1BQ5T0F9 858 aaKnown RBP25.05■■□□□ 1.6
TRAPPC9-210ENST00000521667 STAG3Q9UJ98 1225 aa25.05■■□□□ 1.6
TRAPPC9-210ENST00000521667 ZBED9Q6R2W3 1325 aa25.04■■□□□ 1.6
TRAPPC9-210ENST00000521667 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
TRAPPC9-210ENST00000521667 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
TRAPPC9-210ENST00000521667 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
TRAPPC9-210ENST00000521667 A2ML1A8K2U0 1454 aa25■■□□□ 1.59
TRAPPC9-210ENST00000521667 CEBPAP49715 358 aaPredicted RBP25■■□□□ 1.59
TRAPPC9-210ENST00000521667 SUPT16HQ9Y5B9 1047 aaKnown RBP25■■□□□ 1.59
TRAPPC9-210ENST00000521667 LRPPRCP42704 1394 aaKnown RBP24.99■■□□□ 1.59
TRAPPC9-210ENST00000521667 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
TRAPPC9-210ENST00000521667 AMER1Q5JTC6 1135 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC9-210ENST00000521667 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
TRAPPC9-210ENST00000521667 ARHGEF28Q8N1W1 1705 aaKnown RBP24.97■■□□□ 1.59
TRAPPC9-210ENST00000521667 NPC1L1Q9UHC9 1359 aa24.95■■□□□ 1.59
TRAPPC9-210ENST00000521667 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
TRAPPC9-210ENST00000521667 C3P01024 1663 aa24.95■■□□□ 1.58
TRAPPC9-210ENST00000521667 TNRQ92752 1358 aa24.94■■□□□ 1.58
TRAPPC9-210ENST00000521667 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
TRAPPC9-210ENST00000521667 ALKQ9UM73 1620 aa24.92■■□□□ 1.58
TRAPPC9-210ENST00000521667 PUS7Q96PZ0 661 aaKnown RBP24.9■■□□□ 1.58
TRAPPC9-210ENST00000521667 YTHDC2Q9H6S0 1430 aaKnown RBP24.89■■□□□ 1.58
TRAPPC9-210ENST00000521667 NEFLP07196 543 aa24.89■■□□□ 1.57
TRAPPC9-210ENST00000521667 STK26Q9P289 416 aa24.89■■□□□ 1.57
TRAPPC9-210ENST00000521667 EVC2Q86UK5 1308 aa24.89■■□□□ 1.57
TRAPPC9-210ENST00000521667 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
TRAPPC9-210ENST00000521667 CARD14Q9BXL6 1004 aa24.87■■□□□ 1.57
TRAPPC9-210ENST00000521667 PTPRMP28827 1452 aa24.87■■□□□ 1.57
TRAPPC9-210ENST00000521667 FKBP8Q14318 412 aa24.86■■□□□ 1.57
TRAPPC9-210ENST00000521667 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
TRAPPC9-210ENST00000521667 RIMS1Q86UR5 1692 aaKnown RBP24.86■■□□□ 1.57
TRAPPC9-210ENST00000521667 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
TRAPPC9-210ENST00000521667 INSRP06213 1382 aa24.83■■□□□ 1.57
TRAPPC9-210ENST00000521667 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
TRAPPC9-210ENST00000521667 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
TRAPPC9-210ENST00000521667 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.562e-7■■■■□ 23
TRAPPC9-210ENST00000521667 PRAM1Q96QH2 718 aa24.81■■□□□ 1.56
TRAPPC9-210ENST00000521667 ADAMTSL3P82987 1691 aa24.8■■□□□ 1.56
TRAPPC9-210ENST00000521667 HDGFP51858 240 aaKnown RBP24.79■■□□□ 1.56
TRAPPC9-210ENST00000521667 POGKQ9P215 609 aa24.79■■□□□ 1.56
TRAPPC9-210ENST00000521667 NSD3Q9BZ95 1437 aa24.79■■□□□ 1.56
TRAPPC9-210ENST00000521667 SMG6Q86US8 1419 aaKnown RBP24.78■■□□□ 1.56
TRAPPC9-210ENST00000521667 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms