RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
CTNNA1-227ENST00000521387 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-227ENST00000521387 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
CTNNA1-227ENST00000521387 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
CTNNA1-227ENST00000521387 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
CTNNA1-227ENST00000521387 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
CTNNA1-227ENST00000521387 DEFB132Q7Z7B7 95 aa12.25□□□□□ -0.45
CTNNA1-227ENST00000521387 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
CTNNA1-227ENST00000521387 ERVK-7P63135 1459 aa12.25□□□□□ -0.45
CTNNA1-227ENST00000521387 TET3O43151 1660 aa12.24□□□□□ -0.45
CTNNA1-227ENST00000521387 HRCP23327 699 aa12.24□□□□□ -0.45
CTNNA1-227ENST00000521387 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
CTNNA1-227ENST00000521387 ABCC3O15438 1527 aa12.22□□□□□ -0.45
CTNNA1-227ENST00000521387 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
CTNNA1-227ENST00000521387 ZNF644Q9H582 1327 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-227ENST00000521387 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-227ENST00000521387 NHSL1Q5SYE7 1610 aa12.21□□□□□ -0.46
CTNNA1-227ENST00000521387 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
CTNNA1-227ENST00000521387 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.46
CTNNA1-227ENST00000521387 TMEM2Q9UHN6 1383 aa12.2□□□□□ -0.46
CTNNA1-227ENST00000521387 BRINP3Q76B58 766 aa12.2□□□□□ -0.46
CTNNA1-227ENST00000521387 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
CTNNA1-227ENST00000521387 CFDP1Q9UEE9 299 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-227ENST00000521387 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
CTNNA1-227ENST00000521387 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
CTNNA1-227ENST00000521387 ATRNO75882 1429 aa12.16□□□□□ -0.46
CTNNA1-227ENST00000521387 BLMP54132 1417 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-227ENST00000521387 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
CTNNA1-227ENST00000521387 USP21Q9UK80 565 aa12.15□□□□□ -0.46
CTNNA1-227ENST00000521387 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-227ENST00000521387 PNPLA6Q8IY17 1366 aa12.15□□□□□ -0.46
CTNNA1-227ENST00000521387 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
CTNNA1-227ENST00000521387 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-227ENST00000521387 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-227ENST00000521387 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
CTNNA1-227ENST00000521387 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
CTNNA1-227ENST00000521387 DDX17Q92841 729 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-227ENST00000521387 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
CTNNA1-227ENST00000521387 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-227ENST00000521387 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
CTNNA1-227ENST00000521387 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-227ENST00000521387 PIK3C2BO00750 1634 aa12.1□□□□□ -0.47
CTNNA1-227ENST00000521387 CEP350Q5VT06 3117 aa12.1□□□□□ -0.47
CTNNA1-227ENST00000521387 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
CTNNA1-227ENST00000521387 ATF3P18847 181 aa12.09□□□□□ -0.47
CTNNA1-227ENST00000521387 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
CTNNA1-227ENST00000521387 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
CTNNA1-227ENST00000521387 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-227ENST00000521387 CASKIN1Q8WXD9 1431 aa12.08□□□□□ -0.48
CTNNA1-227ENST00000521387 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
CTNNA1-227ENST00000521387 CCNB3Q8WWL7 1395 aa12.07□□□□□ -0.48
CTNNA1-227ENST00000521387 MYCNP04198 464 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-227ENST00000521387 IDI1Q13907 227 aa12.07□□□□□ -0.48
CTNNA1-227ENST00000521387 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-227ENST00000521387 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
CTNNA1-227ENST00000521387 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
CTNNA1-227ENST00000521387 HAX1O00165 279 aa12.05□□□□□ -0.48
CTNNA1-227ENST00000521387 R3HDM1Q15032 1099 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-227ENST00000521387 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-227ENST00000521387 GJD4Q96KN9 370 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-227ENST00000521387 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
CTNNA1-227ENST00000521387 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
CTNNA1-227ENST00000521387 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
CTNNA1-227ENST00000521387 MST1RQ04912 1400 aa12.03□□□□□ -0.48
CTNNA1-227ENST00000521387 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-227ENST00000521387 CEP152O94986 1710 aa12.02□□□□□ -0.49
CTNNA1-227ENST00000521387 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
CTNNA1-227ENST00000521387 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-227ENST00000521387 BCANQ96GW7 911 aa12.01□□□□□ -0.49
CTNNA1-227ENST00000521387 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
CTNNA1-227ENST00000521387 UTRNP46939 3433 aa12.01□□□□□ -0.49
CTNNA1-227ENST00000521387 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
CTNNA1-227ENST00000521387 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
CTNNA1-227ENST00000521387 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
CTNNA1-227ENST00000521387 UNC13BO14795 1591 aa11.99□□□□□ -0.49
CTNNA1-227ENST00000521387 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
CTNNA1-227ENST00000521387 GLI3P10071 1580 aa11.98□□□□□ -0.49
CTNNA1-227ENST00000521387 EEA1Q15075 1411 aa11.98□□□□□ -0.49
CTNNA1-227ENST00000521387 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
CTNNA1-227ENST00000521387 ZFYVE9O95405 1425 aa11.97□□□□□ -0.49
CTNNA1-227ENST00000521387 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-227ENST00000521387 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-227ENST00000521387 DCCP43146 1447 aa11.96□□□□□ -0.49
CTNNA1-227ENST00000521387 ADAMTS13Q76LX8 1427 aa11.96□□□□□ -0.49
CTNNA1-227ENST00000521387 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 BAG6P46379 1132 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 EVX2Q03828 476 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
CTNNA1-227ENST00000521387 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
CTNNA1-227ENST00000521387 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-227ENST00000521387 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
CTNNA1-227ENST00000521387 MYOM2P54296 1465 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms