RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
VNN3-212ENST00000519686 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
VNN3-212ENST00000519686 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
VNN3-212ENST00000519686 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
VNN3-212ENST00000519686 SLIT1O75093 1534 aa13.92□□□□□ -0.18
VNN3-212ENST00000519686 EFCAB6Q5THR3 1501 aa13.92□□□□□ -0.18
VNN3-212ENST00000519686 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
VNN3-212ENST00000519686 SYNMO15061 1565 aa13.89□□□□□ -0.19
VNN3-212ENST00000519686 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
VNN3-212ENST00000519686 LTKP29376 864 aa13.89□□□□□ -0.19
VNN3-212ENST00000519686 TMEM2Q9UHN6 1383 aa13.89□□□□□ -0.19
VNN3-212ENST00000519686 IDI1Q13907 227 aa13.88□□□□□ -0.19
VNN3-212ENST00000519686 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
VNN3-212ENST00000519686 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
VNN3-212ENST00000519686 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
VNN3-212ENST00000519686 TET3O43151 1660 aa13.86□□□□□ -0.19
VNN3-212ENST00000519686 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
VNN3-212ENST00000519686 NOS1P29475 1434 aa13.86□□□□□ -0.19
VNN3-212ENST00000519686 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
VNN3-212ENST00000519686 HSPA1LP34931 641 aa13.85□□□□□ -0.19
VNN3-212ENST00000519686 ITGAEP38570 1179 aa13.85□□□□□ -0.19
VNN3-212ENST00000519686 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
VNN3-212ENST00000519686 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
VNN3-212ENST00000519686 BCANQ96GW7 911 aa13.84□□□□□ -0.19
VNN3-212ENST00000519686 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
VNN3-212ENST00000519686 UNC13BO14795 1591 aa13.84□□□□□ -0.19
VNN3-212ENST00000519686 ILDR2Q71H61 639 aa13.83□□□□□ -0.2
VNN3-212ENST00000519686 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
VNN3-212ENST00000519686 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
VNN3-212ENST00000519686 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
VNN3-212ENST00000519686 SLC26A8Q96RN1 970 aa13.8□□□□□ -0.2
VNN3-212ENST00000519686 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
VNN3-212ENST00000519686 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
VNN3-212ENST00000519686 E9PCH4 1651 aa13.79□□□□□ -0.2
VNN3-212ENST00000519686 MYO5BQ9ULV0 1848 aa13.79□□□□□ -0.2
VNN3-212ENST00000519686 NUP155O75694 1391 aa13.78□□□□□ -0.2
VNN3-212ENST00000519686 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.2
VNN3-212ENST00000519686 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.2
VNN3-212ENST00000519686 KCNA6P17658 529 aa13.77□□□□□ -0.21
VNN3-212ENST00000519686 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
VNN3-212ENST00000519686 SOCS7O14512 581 aa13.76□□□□□ -0.21
VNN3-212ENST00000519686 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
VNN3-212ENST00000519686 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
VNN3-212ENST00000519686 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
VNN3-212ENST00000519686 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
VNN3-212ENST00000519686 PLEKHG1Q9ULL1 1385 aa13.75□□□□□ -0.21
VNN3-212ENST00000519686 ZFYVE9O95405 1425 aa13.75□□□□□ -0.21
VNN3-212ENST00000519686 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
VNN3-212ENST00000519686 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
VNN3-212ENST00000519686 NUTM2DQ5VT03 806 aaPredicted RBP13.71□□□□□ -0.21
VNN3-212ENST00000519686 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
VNN3-212ENST00000519686 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
VNN3-212ENST00000519686 MSH6P52701 1360 aa13.71□□□□□ -0.22
VNN3-212ENST00000519686 CHD2O14647 1828 aaKnown RBP13.7□□□□□ -0.22
VNN3-212ENST00000519686 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
VNN3-212ENST00000519686 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
VNN3-212ENST00000519686 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
VNN3-212ENST00000519686 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
VNN3-212ENST00000519686 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
VNN3-212ENST00000519686 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
VNN3-212ENST00000519686 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
VNN3-212ENST00000519686 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
VNN3-212ENST00000519686 ZNF326Q5BKZ1 582 aaKnown RBP13.67□□□□□ -0.22
VNN3-212ENST00000519686 TRPM2O94759 1503 aa13.65□□□□□ -0.22
VNN3-212ENST00000519686 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
VNN3-212ENST00000519686 NAIPQ13075 1403 aa13.65□□□□□ -0.22
VNN3-212ENST00000519686 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
VNN3-212ENST00000519686 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
VNN3-212ENST00000519686 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
VNN3-212ENST00000519686 NCOA3Q9Y6Q9 1424 aa13.63□□□□□ -0.23
VNN3-212ENST00000519686 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 ATF3P18847 181 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 KIF1BO60333 1816 aa13.61□□□□□ -0.23
VNN3-212ENST00000519686 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
VNN3-212ENST00000519686 SETBP1Q9Y6X0 1596 aa13.59□□□□□ -0.23
VNN3-212ENST00000519686 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
VNN3-212ENST00000519686 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.23
VNN3-212ENST00000519686 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
VNN3-212ENST00000519686 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
VNN3-212ENST00000519686 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
VNN3-212ENST00000519686 XRN1Q8IZH2 1706 aaKnown RBP13.56□□□□□ -0.24
VNN3-212ENST00000519686 JCADQ9P266 1359 aa13.55□□□□□ -0.24
VNN3-212ENST00000519686 METP08581 1390 aa13.54□□□□□ -0.24
VNN3-212ENST00000519686 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
VNN3-212ENST00000519686 DCCP43146 1447 aa13.53□□□□□ -0.24
VNN3-212ENST00000519686 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
VNN3-212ENST00000519686 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.25
VNN3-212ENST00000519686 RPGRIP1LQ68CZ1 1315 aa13.52□□□□□ -0.25
VNN3-212ENST00000519686 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
VNN3-212ENST00000519686 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
VNN3-212ENST00000519686 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
VNN3-212ENST00000519686 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
VNN3-212ENST00000519686 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
VNN3-212ENST00000519686 PPLO60437 1756 aa13.49□□□□□ -0.25
VNN3-212ENST00000519686 ADGRL3Q9HAR2 1447 aa13.48□□□□□ -0.25
VNN3-212ENST00000519686 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
VNN3-212ENST00000519686 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms