RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 ARAP3Q8WWN8 1544 aa11.05□□□□□ -0.64
TRPS1-209ENST00000519674 FANCAO15360 1455 aa11.05□□□□□ -0.64
TRPS1-209ENST00000519674 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
TRPS1-209ENST00000519674 RGS3P49796 1198 aa11.04□□□□□ -0.64
TRPS1-209ENST00000519674 TAF7LQ5H9L4 462 aa11.04□□□□□ -0.64
TRPS1-209ENST00000519674 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
TRPS1-209ENST00000519674 ABCA9Q8IUA7 1624 aa11.03□□□□□ -0.64
TRPS1-209ENST00000519674 ATP10AO60312 1499 aa11.02□□□□□ -0.64
TRPS1-209ENST00000519674 RTEL1-TNFRSF6BF6WH68 1400 aa11.02□□□□□ -0.64
TRPS1-209ENST00000519674 ASXL2Q76L83 1435 aa11.02□□□□□ -0.65
TRPS1-209ENST00000519674 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
TRPS1-209ENST00000519674 E9PCH4 1651 aa11.02□□□□□ -0.65
TRPS1-209ENST00000519674 ATP7AQ04656 1500 aa11.01□□□□□ -0.65
TRPS1-209ENST00000519674 ADGRL1O94910 1474 aa11.01□□□□□ -0.65
TRPS1-209ENST00000519674 SCAPERQ9BY12 1400 aa11□□□□□ -0.65
TRPS1-209ENST00000519674 INO80Q9ULG1 1556 aaPredicted RBP11□□□□□ -0.65
TRPS1-209ENST00000519674 NUDCQ9Y266 331 aa11□□□□□ -0.65
TRPS1-209ENST00000519674 GPRASP1Q5JY77 1395 aa10.99□□□□□ -0.65
TRPS1-209ENST00000519674 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
TRPS1-209ENST00000519674 DEPDC5O75140 1603 aa10.98□□□□□ -0.65
TRPS1-209ENST00000519674 KIF3BO15066 747 aa10.98□□□□□ -0.65
TRPS1-209ENST00000519674 TPM2P07951 284 aa10.98□□□□□ -0.65
TRPS1-209ENST00000519674 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
TRPS1-209ENST00000519674 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
TRPS1-209ENST00000519674 SPHKAPQ2M3C7 1700 aa10.97□□□□□ -0.65
TRPS1-209ENST00000519674 LAMC1P11047 1609 aa10.97□□□□□ -0.65
TRPS1-209ENST00000519674 GTF2E1P29083 439 aaPredicted RBP10.97□□□□□ -0.65
TRPS1-209ENST00000519674 TRPM2O94759 1503 aa10.97□□□□□ -0.65
TRPS1-209ENST00000519674 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRPS1-209ENST00000519674 TMC1Q8TDI8 760 aa10.96□□□□□ -0.65
TRPS1-209ENST00000519674 DISP3Q9P2K9 1392 aa10.96□□□□□ -0.65
TRPS1-209ENST00000519674 TET3O43151 1660 aa10.96□□□□□ -0.65
TRPS1-209ENST00000519674 KANK1Q14678 1352 aa10.96□□□□□ -0.66
TRPS1-209ENST00000519674 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-209ENST00000519674 TESK2Q96S53 571 aa10.95□□□□□ -0.66
TRPS1-209ENST00000519674 POGKQ9P215 609 aa10.95□□□□□ -0.66
TRPS1-209ENST00000519674 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
TRPS1-209ENST00000519674 CEP152O94986 1710 aa10.95□□□□□ -0.66
TRPS1-209ENST00000519674 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
TRPS1-209ENST00000519674 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-209ENST00000519674 COL17A1Q9UMD9 1497 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-209ENST00000519674 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
TRPS1-209ENST00000519674 PTPRTO14522 1441 aa10.94□□□□□ -0.66
TRPS1-209ENST00000519674 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
TRPS1-209ENST00000519674 AEBP2Q6ZN18 517 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-209ENST00000519674 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
TRPS1-209ENST00000519674 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
TRPS1-209ENST00000519674 MYBBP1AQ9BQG0 1328 aaKnown RBP10.93□□□□□ -0.66
TRPS1-209ENST00000519674 VWDEQ8N2E2 1590 aa10.93□□□□□ -0.66
TRPS1-209ENST00000519674 MROH1Q8NDA8 1641 aa10.93□□□□□ -0.66
TRPS1-209ENST00000519674 RALBP1Q15311 655 aa10.93□□□□□ -0.66
TRPS1-209ENST00000519674 XRCC6P12956 609 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRPS1-209ENST00000519674 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-209ENST00000519674 ZNF518AQ6AHZ1 1483 aa10.92□□□□□ -0.66
TRPS1-209ENST00000519674 TMF1P82094 1093 aa10.92□□□□□ -0.66
TRPS1-209ENST00000519674 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
TRPS1-209ENST00000519674 UGGT1Q9NYU2 1555 aa10.92□□□□□ -0.66
TRPS1-209ENST00000519674 FSD2A1L4K1 749 aa10.91□□□□□ -0.66
TRPS1-209ENST00000519674 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
TRPS1-209ENST00000519674 CD109Q6YHK3 1445 aa10.91□□□□□ -0.66
TRPS1-209ENST00000519674 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-209ENST00000519674 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-209ENST00000519674 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
TRPS1-209ENST00000519674 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
TRPS1-209ENST00000519674 PANK3Q9H999 370 aa10.9□□□□□ -0.66
TRPS1-209ENST00000519674 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.67
TRPS1-209ENST00000519674 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
TRPS1-209ENST00000519674 CHMP4BQ9H444 224 aaKnown RBP10.89□□□□□ -0.67
TRPS1-209ENST00000519674 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
TRPS1-209ENST00000519674 PPRC1Q5VV67 1664 aaKnown RBP10.88□□□□□ -0.67
TRPS1-209ENST00000519674 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
TRPS1-209ENST00000519674 POGZQ7Z3K3 1410 aa10.88□□□□□ -0.67
TRPS1-209ENST00000519674 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
TRPS1-209ENST00000519674 MAP7D2Q96T17 732 aa10.88□□□□□ -0.67
TRPS1-209ENST00000519674 LRPPRCP42704 1394 aaKnown RBP10.88□□□□□ -0.67
TRPS1-209ENST00000519674 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
TRPS1-209ENST00000519674 ESPNB1AK53 854 aa10.87□□□□□ -0.67
TRPS1-209ENST00000519674 ARXQ96QS3 562 aa10.87□□□□□ -0.67
TRPS1-209ENST00000519674 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
TRPS1-209ENST00000519674 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
TRPS1-209ENST00000519674 SCAF11Q99590 1463 aaKnown RBP10.87□□□□□ -0.67
TRPS1-209ENST00000519674 KIF1BO60333 1816 aa10.87□□□□□ -0.67
TRPS1-209ENST00000519674 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
TRPS1-209ENST00000519674 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
TRPS1-209ENST00000519674 GGT6Q6P531 493 aa10.86□□□□□ -0.67
TRPS1-209ENST00000519674 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
TRPS1-209ENST00000519674 PANK2Q9BZ23 570 aa10.86□□□□□ -0.67
TRPS1-209ENST00000519674 HECW2Q9P2P5 1572 aa10.85□□□□□ -0.67
TRPS1-209ENST00000519674 FRMPD1Q5SYB0 1578 aa10.85□□□□□ -0.67
TRPS1-209ENST00000519674 GOLGA6L3A6NEY3 463 aa10.85□□□□□ -0.67
TRPS1-209ENST00000519674 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
TRPS1-209ENST00000519674 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
TRPS1-209ENST00000519674 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 MAP3K4Q9Y6R4 1608 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
TRPS1-209ENST00000519674 NCLP19338 710 aaKnown RBP10.84□□□□□ -0.67
TRPS1-209ENST00000519674 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 TERF1P54274 439 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms