RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 COL17A1Q9UMD9 1497 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-205ENST00000519575 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
PDGFRB-205ENST00000519575 UGGT1Q9NYU2 1555 aa13.96□□□□□ -0.17
PDGFRB-205ENST00000519575 ZFYVE9O95405 1425 aa13.95□□□□□ -0.18
PDGFRB-205ENST00000519575 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
PDGFRB-205ENST00000519575 ST20-MTHFSA0A0A6YYL1 179 aa13.94□□□□□ -0.18
PDGFRB-205ENST00000519575 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 TMF1P82094 1093 aa13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 KDM5AP29375 1690 aaKnown RBP13.93□□□□□ -0.18
PDGFRB-205ENST00000519575 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
PDGFRB-205ENST00000519575 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
PDGFRB-205ENST00000519575 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
PDGFRB-205ENST00000519575 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.18
PDGFRB-205ENST00000519575 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
PDGFRB-205ENST00000519575 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
PDGFRB-205ENST00000519575 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
PDGFRB-205ENST00000519575 NBPF1Q3BBV0 1214 aa13.88□□□□□ -0.19
PDGFRB-205ENST00000519575 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
PDGFRB-205ENST00000519575 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
PDGFRB-205ENST00000519575 TESK2Q96S53 571 aa13.85□□□□□ -0.19
PDGFRB-205ENST00000519575 MYO5BQ9ULV0 1848 aa13.85□□□□□ -0.19
PDGFRB-205ENST00000519575 RALBP1Q15311 655 aa13.84□□□□□ -0.19
PDGFRB-205ENST00000519575 C14orf93Q9H972 538 aaKnown RBP13.84□□□□□ -0.19
PDGFRB-205ENST00000519575 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
PDGFRB-205ENST00000519575 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.2
PDGFRB-205ENST00000519575 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
PDGFRB-205ENST00000519575 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
PDGFRB-205ENST00000519575 QRICH2Q9H0J4 1663 aa13.82□□□□□ -0.2
PDGFRB-205ENST00000519575 IDI1Q13907 227 aa13.81□□□□□ -0.2
PDGFRB-205ENST00000519575 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
PDGFRB-205ENST00000519575 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
PDGFRB-205ENST00000519575 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDGFRB-205ENST00000519575 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
PDGFRB-205ENST00000519575 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 FER1L4A9Z1Z3 1794 aa13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
PDGFRB-205ENST00000519575 A2ML1A8K2U0 1454 aa13.78□□□□□ -0.2
PDGFRB-205ENST00000519575 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
PDGFRB-205ENST00000519575 MYOM1P52179 1685 aa13.77□□□□□ -0.21
PDGFRB-205ENST00000519575 TNRQ92752 1358 aa13.77□□□□□ -0.21
PDGFRB-205ENST00000519575 MYBBP1AQ9BQG0 1328 aaKnown RBP13.77□□□□□ -0.21
PDGFRB-205ENST00000519575 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
PDGFRB-205ENST00000519575 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
PDGFRB-205ENST00000519575 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
PDGFRB-205ENST00000519575 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
PDGFRB-205ENST00000519575 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
PDGFRB-205ENST00000519575 RIMS2Q9UQ26 1411 aa13.74□□□□□ -0.21
PDGFRB-205ENST00000519575 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
PDGFRB-205ENST00000519575 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
PDGFRB-205ENST00000519575 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
PDGFRB-205ENST00000519575 MLECQ14165 292 aa13.73□□□□□ -0.21
PDGFRB-205ENST00000519575 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
PDGFRB-205ENST00000519575 INSRP06213 1382 aa13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 C3P01024 1663 aa13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
PDGFRB-205ENST00000519575 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
PDGFRB-205ENST00000519575 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
PDGFRB-205ENST00000519575 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
PDGFRB-205ENST00000519575 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
PDGFRB-205ENST00000519575 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
PDGFRB-205ENST00000519575 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
PDGFRB-205ENST00000519575 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
PDGFRB-205ENST00000519575 PANK3Q9H999 370 aa13.69□□□□□ -0.22
PDGFRB-205ENST00000519575 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
PDGFRB-205ENST00000519575 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
PDGFRB-205ENST00000519575 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
PDGFRB-205ENST00000519575 PTPRMP28827 1452 aa13.67□□□□□ -0.22
PDGFRB-205ENST00000519575 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
PDGFRB-205ENST00000519575 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDGFRB-205ENST00000519575 LRPPRCP42704 1394 aaKnown RBP13.66□□□□□ -0.22
PDGFRB-205ENST00000519575 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
PDGFRB-205ENST00000519575 SLIT1O75093 1534 aa13.65□□□□□ -0.22
PDGFRB-205ENST00000519575 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
PDGFRB-205ENST00000519575 NSD2O96028 1365 aa13.65□□□□□ -0.22
PDGFRB-205ENST00000519575 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 CPS1P31327 1500 aa13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 TECPR2O15040 1411 aa13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
PDGFRB-205ENST00000519575 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
PDGFRB-205ENST00000519575 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
PDGFRB-205ENST00000519575 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
PDGFRB-205ENST00000519575 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
PDGFRB-205ENST00000519575 TMEM132EQ6IEE7 984 aa13.62□□□□□ -0.23
PDGFRB-205ENST00000519575 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
PDGFRB-205ENST00000519575 POGKQ9P215 609 aa13.62□□□□□ -0.23
PDGFRB-205ENST00000519575 ZNF142P52746 1687 aaPredicted RBP13.62□□□□□ -0.23
PDGFRB-205ENST00000519575 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
PDGFRB-205ENST00000519575 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
PDGFRB-205ENST00000519575 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms