RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 PKD2Q13563 968 aa13.95□□□□□ -0.18
LAMA4-211ENST00000518842 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
LAMA4-211ENST00000518842 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
LAMA4-211ENST00000518842 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
LAMA4-211ENST00000518842 SPATA31D1Q6ZQQ2 1576 aa13.94□□□□□ -0.18
LAMA4-211ENST00000518842 RRP7BPQ9NSQ0 103 aa13.94□□□□□ -0.18
LAMA4-211ENST00000518842 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
LAMA4-211ENST00000518842 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
LAMA4-211ENST00000518842 ARHGAP31Q2M1Z3 1444 aa13.93□□□□□ -0.18
LAMA4-211ENST00000518842 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
LAMA4-211ENST00000518842 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
LAMA4-211ENST00000518842 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
LAMA4-211ENST00000518842 VWDEQ8N2E2 1590 aa13.9□□□□□ -0.18
LAMA4-211ENST00000518842 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.19
LAMA4-211ENST00000518842 CHIC2Q9UKJ5 165 aa13.89□□□□□ -0.19
LAMA4-211ENST00000518842 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
LAMA4-211ENST00000518842 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
LAMA4-211ENST00000518842 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
LAMA4-211ENST00000518842 THEMISQ8N1K5 641 aaPredicted RBP13.87□□□□□ -0.19
LAMA4-211ENST00000518842 UGGT1Q9NYU2 1555 aa13.87□□□□□ -0.19
LAMA4-211ENST00000518842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
LAMA4-211ENST00000518842 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
LAMA4-211ENST00000518842 MED14O60244 1454 aa13.86□□□□□ -0.19
LAMA4-211ENST00000518842 CEP152O94986 1710 aa13.85□□□□□ -0.19
LAMA4-211ENST00000518842 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
LAMA4-211ENST00000518842 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
LAMA4-211ENST00000518842 KANK1Q14678 1352 aa13.84□□□□□ -0.19
LAMA4-211ENST00000518842 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
LAMA4-211ENST00000518842 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
LAMA4-211ENST00000518842 NOS1P29475 1434 aa13.82□□□□□ -0.2
LAMA4-211ENST00000518842 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
LAMA4-211ENST00000518842 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
LAMA4-211ENST00000518842 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-211ENST00000518842 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
LAMA4-211ENST00000518842 SLIT1O75093 1534 aa13.8□□□□□ -0.2
LAMA4-211ENST00000518842 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
LAMA4-211ENST00000518842 RPRD2Q5VT52 1461 aaKnown RBP13.78□□□□□ -0.2
LAMA4-211ENST00000518842 SYNMO15061 1565 aa13.78□□□□□ -0.2
LAMA4-211ENST00000518842 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
LAMA4-211ENST00000518842 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
LAMA4-211ENST00000518842 RRBP1Q9P2E9 1410 aaKnown RBP13.77□□□□□ -0.21
LAMA4-211ENST00000518842 UNC13BO14795 1591 aa13.76□□□□□ -0.21
LAMA4-211ENST00000518842 CPS1P31327 1500 aa13.76□□□□□ -0.21
LAMA4-211ENST00000518842 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
LAMA4-211ENST00000518842 LTKP29376 864 aa13.76□□□□□ -0.21
LAMA4-211ENST00000518842 IDI1Q13907 227 aa13.76□□□□□ -0.21
LAMA4-211ENST00000518842 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
LAMA4-211ENST00000518842 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
LAMA4-211ENST00000518842 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
LAMA4-211ENST00000518842 PROM2Q8N271 834 aa13.73□□□□□ -0.21
LAMA4-211ENST00000518842 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
LAMA4-211ENST00000518842 TET3O43151 1660 aa13.72□□□□□ -0.21
LAMA4-211ENST00000518842 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
LAMA4-211ENST00000518842 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
LAMA4-211ENST00000518842 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
LAMA4-211ENST00000518842 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
LAMA4-211ENST00000518842 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
LAMA4-211ENST00000518842 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
LAMA4-211ENST00000518842 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
LAMA4-211ENST00000518842 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
LAMA4-211ENST00000518842 ITGAEP38570 1179 aa13.68□□□□□ -0.22
LAMA4-211ENST00000518842 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
LAMA4-211ENST00000518842 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
LAMA4-211ENST00000518842 NUP155O75694 1391 aa13.68□□□□□ -0.22
LAMA4-211ENST00000518842 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
LAMA4-211ENST00000518842 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
LAMA4-211ENST00000518842 ALKQ9UM73 1620 aa13.67□□□□□ -0.22
LAMA4-211ENST00000518842 NAIPQ13075 1403 aa13.66□□□□□ -0.22
LAMA4-211ENST00000518842 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
LAMA4-211ENST00000518842 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
LAMA4-211ENST00000518842 MS4A3Q96HJ5 214 aa13.65□□□□□ -0.22
LAMA4-211ENST00000518842 E9PCH4 1651 aa13.65□□□□□ -0.22
LAMA4-211ENST00000518842 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
LAMA4-211ENST00000518842 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
LAMA4-211ENST00000518842 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
LAMA4-211ENST00000518842 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
LAMA4-211ENST00000518842 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
LAMA4-211ENST00000518842 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
LAMA4-211ENST00000518842 TOM1O60784 492 aa13.62□□□□□ -0.23
LAMA4-211ENST00000518842 C7P10643 843 aa13.62□□□□□ -0.23
LAMA4-211ENST00000518842 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-211ENST00000518842 KCNA6P17658 529 aa13.6□□□□□ -0.23
LAMA4-211ENST00000518842 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
LAMA4-211ENST00000518842 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
LAMA4-211ENST00000518842 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
LAMA4-211ENST00000518842 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
LAMA4-211ENST00000518842 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-211ENST00000518842 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
LAMA4-211ENST00000518842 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
LAMA4-211ENST00000518842 HSPA1LP34931 641 aa13.57□□□□□ -0.24
LAMA4-211ENST00000518842 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
LAMA4-211ENST00000518842 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
LAMA4-211ENST00000518842 TMEM94Q12767 1356 aa13.57□□□□□ -0.24
LAMA4-211ENST00000518842 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
LAMA4-211ENST00000518842 PIP4K2BP78356 416 aa13.56□□□□□ -0.24
LAMA4-211ENST00000518842 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
LAMA4-211ENST00000518842 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
LAMA4-211ENST00000518842 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
LAMA4-211ENST00000518842 TRPM2O94759 1503 aa13.54□□□□□ -0.24
LAMA4-211ENST00000518842 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms