RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 IDI1Q13907 227 aa21.1■□□□□ 0.97
TRAPPC9-205ENST00000518839 NEXMIFQ5QGS0 1516 aa21.09■□□□□ 0.97
TRAPPC9-205ENST00000518839 IQGAP1P46940 1657 aa21.08■□□□□ 0.96
TRAPPC9-205ENST00000518839 FBXO31Q5XUX0 539 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC9-205ENST00000518839 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
TRAPPC9-205ENST00000518839 ZFYVE9O95405 1425 aa21.06■□□□□ 0.96
TRAPPC9-205ENST00000518839 VGFO15240 615 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC9-205ENST00000518839 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
TRAPPC9-205ENST00000518839 SETBP1Q9Y6X0 1596 aa21.05■□□□□ 0.96
TRAPPC9-205ENST00000518839 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-205ENST00000518839 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
TRAPPC9-205ENST00000518839 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
TRAPPC9-205ENST00000518839 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
TRAPPC9-205ENST00000518839 ADGRF5Q8IZF2 1346 aa21.03■□□□□ 0.96
TRAPPC9-205ENST00000518839 C3P01024 1663 aa21.02■□□□□ 0.96
TRAPPC9-205ENST00000518839 SCAF11Q99590 1463 aaKnown RBP21.02■□□□□ 0.96
TRAPPC9-205ENST00000518839 TNRQ92752 1358 aa21.02■□□□□ 0.96
TRAPPC9-205ENST00000518839 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
TRAPPC9-205ENST00000518839 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
TRAPPC9-205ENST00000518839 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
TRAPPC9-205ENST00000518839 A2ML1A8K2U0 1454 aa20.98■□□□□ 0.95
TRAPPC9-205ENST00000518839 NLRP1Q9C000 1473 aa20.98■□□□□ 0.95
TRAPPC9-205ENST00000518839 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
TRAPPC9-205ENST00000518839 MIER1Q8N108 512 aa20.96■□□□□ 0.95
TRAPPC9-205ENST00000518839 C14orf93Q9H972 538 aaKnown RBP20.96■□□□□ 0.95
TRAPPC9-205ENST00000518839 SLC24A1O60721 1099 aa20.95■□□□□ 0.94
TRAPPC9-205ENST00000518839 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.94
TRAPPC9-205ENST00000518839 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC9-205ENST00000518839 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
TRAPPC9-205ENST00000518839 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
TRAPPC9-205ENST00000518839 ADAMTSL3P82987 1691 aa20.93■□□□□ 0.94
TRAPPC9-205ENST00000518839 HDGFP51858 240 aaKnown RBP20.92■□□□□ 0.94
TRAPPC9-205ENST00000518839 ADGRB1O14514 1584 aa20.92■□□□□ 0.94
TRAPPC9-205ENST00000518839 RIMS1Q86UR5 1692 aaKnown RBP20.92■□□□□ 0.94
TRAPPC9-205ENST00000518839 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.91■□□□□ 0.94
TRAPPC9-205ENST00000518839 RIMS2Q9UQ26 1411 aa20.91■□□□□ 0.94
TRAPPC9-205ENST00000518839 TMF1P82094 1093 aa20.89■□□□□ 0.93
TRAPPC9-205ENST00000518839 ANP32CO43423 234 aa20.88■□□□□ 0.93
TRAPPC9-205ENST00000518839 TESK2Q96S53 571 aa20.88■□□□□ 0.93
TRAPPC9-205ENST00000518839 CDCA8Q53HL2 280 aa20.85■□□□□ 0.93
TRAPPC9-205ENST00000518839 SBNO2Q9Y2G9 1366 aa20.85■□□□□ 0.93
TRAPPC9-205ENST00000518839 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
TRAPPC9-205ENST00000518839 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-205ENST00000518839 NUTM2DQ5VT03 806 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-205ENST00000518839 ARHGEF28Q8N1W1 1705 aaKnown RBP20.83■□□□□ 0.92
TRAPPC9-205ENST00000518839 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
TRAPPC9-205ENST00000518839 QRICH2Q9H0J4 1663 aa20.82■□□□□ 0.92
TRAPPC9-205ENST00000518839 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
TRAPPC9-205ENST00000518839 SETD1AO15047 1707 aaKnown RBP20.81■□□□□ 0.92
TRAPPC9-205ENST00000518839 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
TRAPPC9-205ENST00000518839 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
TRAPPC9-205ENST00000518839 DISP3Q9P2K9 1392 aa20.8■□□□□ 0.92
TRAPPC9-205ENST00000518839 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC9-205ENST00000518839 SLIT1O75093 1534 aa20.79■□□□□ 0.92
TRAPPC9-205ENST00000518839 NRXN3Q9Y4C0 1643 aa20.78■□□□□ 0.92
TRAPPC9-205ENST00000518839 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC9-205ENST00000518839 ARHGAP23Q9P227 1491 aa20.77■□□□□ 0.92
TRAPPC9-205ENST00000518839 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
TRAPPC9-205ENST00000518839 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
TRAPPC9-205ENST00000518839 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-205ENST00000518839 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-205ENST00000518839 TRAK1Q9UPV9 953 aa20.76■□□□□ 0.91
TRAPPC9-205ENST00000518839 YTHDC2Q9H6S0 1430 aaKnown RBP20.75■□□□□ 0.91
TRAPPC9-205ENST00000518839 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
TRAPPC9-205ENST00000518839 EID1Q9Y6B2 187 aa20.74■□□□□ 0.91
TRAPPC9-205ENST00000518839 PLEKHG1Q9ULL1 1385 aa20.73■□□□□ 0.91
TRAPPC9-205ENST00000518839 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
TRAPPC9-205ENST00000518839 PTPRMP28827 1452 aa20.71■□□□□ 0.91
TRAPPC9-205ENST00000518839 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
TRAPPC9-205ENST00000518839 LRPPRCP42704 1394 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-205ENST00000518839 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-205ENST00000518839 MYOM1P52179 1685 aa20.69■□□□□ 0.9
TRAPPC9-205ENST00000518839 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
TRAPPC9-205ENST00000518839 KTN1Q86UP2 1357 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-205ENST00000518839 TXNDC2Q86VQ3 553 aa20.67■□□□□ 0.9
TRAPPC9-205ENST00000518839 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC9-205ENST00000518839 ABCC11Q96J66 1382 aa20.67■□□□□ 0.9
TRAPPC9-205ENST00000518839 EVC2Q86UK5 1308 aa20.65■□□□□ 0.9
TRAPPC9-205ENST00000518839 BCANQ96GW7 911 aa20.65■□□□□ 0.9
TRAPPC9-205ENST00000518839 STK26Q9P289 416 aa20.65■□□□□ 0.9
TRAPPC9-205ENST00000518839 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
TRAPPC9-205ENST00000518839 CPS1P31327 1500 aa20.63■□□□□ 0.89
TRAPPC9-205ENST00000518839 TECPR2O15040 1411 aa20.63■□□□□ 0.89
TRAPPC9-205ENST00000518839 LTKP29376 864 aa20.63■□□□□ 0.89
TRAPPC9-205ENST00000518839 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
TRAPPC9-205ENST00000518839 POGKQ9P215 609 aa20.63■□□□□ 0.89
TRAPPC9-205ENST00000518839 MED14O60244 1454 aa20.62■□□□□ 0.89
TRAPPC9-205ENST00000518839 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
TRAPPC9-205ENST00000518839 TULP4Q9NRJ4 1543 aa20.61■□□□□ 0.89
TRAPPC9-205ENST00000518839 METP08581 1390 aa20.6■□□□□ 0.89
TRAPPC9-205ENST00000518839 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
TRAPPC9-205ENST00000518839 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-205ENST00000518839 PANK3Q9H999 370 aa20.6■□□□□ 0.89
TRAPPC9-205ENST00000518839 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC9-205ENST00000518839 RALBP1Q15311 655 aa20.59■□□□□ 0.89
TRAPPC9-205ENST00000518839 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
TRAPPC9-205ENST00000518839 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-205ENST00000518839 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.88
TRAPPC9-205ENST00000518839 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
TRAPPC9-205ENST00000518839 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms