RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DNAJB2P25686 324 aa8.13□□□□□ -1.11
VPS13B-207ENST00000518569 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
VPS13B-207ENST00000518569 GPCPD1Q9NPB8 672 aa8.13□□□□□ -1.11
VPS13B-207ENST00000518569 DAXXQ9UER7 740 aaPredicted RBP8.13□□□□□ -1.11
VPS13B-207ENST00000518569 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
VPS13B-207ENST00000518569 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
VPS13B-207ENST00000518569 GPBP1L1Q9HC44 474 aaPredicted RBP8.12□□□□□ -1.11
VPS13B-207ENST00000518569 BCAMP50895 628 aa8.11□□□□□ -1.11
VPS13B-207ENST00000518569 MDM2Q00987 491 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-207ENST00000518569 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-207ENST00000518569 SMAPO00193 183 aa8.1□□□□□ -1.11
VPS13B-207ENST00000518569 FAM98CQ17RN3 349 aaKnown RBP8.1□□□□□ -1.11
VPS13B-207ENST00000518569 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
VPS13B-207ENST00000518569 REPIN1Q9BWE0 567 aaKnown RBP8.1□□□□□ -1.11
VPS13B-207ENST00000518569 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
VPS13B-207ENST00000518569 TMEM132AQ24JP5 1023 aa8.08□□□□□ -1.12
VPS13B-207ENST00000518569 FAM217BQ9NTX9 383 aaPredicted RBP8.08□□□□□ -1.12
VPS13B-207ENST00000518569 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
VPS13B-207ENST00000518569 ZFRQ96KR1 1074 aaKnown RBP8.07□□□□□ -1.12
VPS13B-207ENST00000518569 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-207ENST00000518569 HDGFP51858 240 aaKnown RBP8.06□□□□□ -1.12
VPS13B-207ENST00000518569 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
VPS13B-207ENST00000518569 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
VPS13B-207ENST00000518569 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
VPS13B-207ENST00000518569 MS4A1P11836 297 aa8.05□□□□□ -1.12
VPS13B-207ENST00000518569 LRCH3Q96II8 777 aa8.04□□□□□ -1.12
VPS13B-207ENST00000518569 A0A0G2JS52 829 aa8.03□□□□□ -1.12
VPS13B-207ENST00000518569 SLC4A3P48751 1232 aa8.03□□□□□ -1.12
VPS13B-207ENST00000518569 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
VPS13B-207ENST00000518569 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
VPS13B-207ENST00000518569 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
VPS13B-207ENST00000518569 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
VPS13B-207ENST00000518569 IFFO2Q5TF58 517 aa8.02□□□□□ -1.13
VPS13B-207ENST00000518569 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
VPS13B-207ENST00000518569 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
VPS13B-207ENST00000518569 HPS5Q9UPZ3 1129 aa8.02□□□□□ -1.13
VPS13B-207ENST00000518569 CD46P15529 392 aa8.01□□□□□ -1.13
VPS13B-207ENST00000518569 SAMD7Q7Z3H4 446 aa8.01□□□□□ -1.13
VPS13B-207ENST00000518569 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
VPS13B-207ENST00000518569 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
VPS13B-207ENST00000518569 DDX11L8A8MPP1 907 aa8□□□□□ -1.13
VPS13B-207ENST00000518569 NYAP1Q6ZVC0 841 aa8□□□□□ -1.13
VPS13B-207ENST00000518569 NECTIN2Q92692 538 aa8□□□□□ -1.13
VPS13B-207ENST00000518569 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
VPS13B-207ENST00000518569 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
VPS13B-207ENST00000518569 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
VPS13B-207ENST00000518569 TSR3Q9UJK0 312 aaKnown RBP7.99□□□□□ -1.13
VPS13B-207ENST00000518569 RGS20O76081 388 aa7.98□□□□□ -1.13
VPS13B-207ENST00000518569 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
VPS13B-207ENST00000518569 RNF40O75150 1001 aa7.97□□□□□ -1.13
VPS13B-207ENST00000518569 ITGBL1O95965 494 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-207ENST00000518569 RDH13Q8NBN7 331 aa7.97□□□□□ -1.13
VPS13B-207ENST00000518569 SLC10A3P09131 477 aa7.96□□□□□ -1.14
VPS13B-207ENST00000518569 GCGRP47871 477 aa7.96□□□□□ -1.14
VPS13B-207ENST00000518569 PPP4CP60510 307 aa7.96□□□□□ -1.14
VPS13B-207ENST00000518569 KCNC4Q03721 635 aa7.96□□□□□ -1.14
VPS13B-207ENST00000518569 IRX2Q9BZI1 471 aaPredicted RBP7.96□□□□□ -1.14
VPS13B-207ENST00000518569 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
VPS13B-207ENST00000518569 USP46P62068 366 aa7.94□□□□□ -1.14
VPS13B-207ENST00000518569 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
VPS13B-207ENST00000518569 NUTM1Q86Y26 1132 aa7.93□□□□□ -1.14
VPS13B-207ENST00000518569 SPIRE2Q8WWL2 714 aa7.93□□□□□ -1.14
VPS13B-207ENST00000518569 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
VPS13B-207ENST00000518569 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
VPS13B-207ENST00000518569 KDM4AO75164 1064 aa7.92□□□□□ -1.14
VPS13B-207ENST00000518569 GJA5P36382 358 aa7.92□□□□□ -1.14
VPS13B-207ENST00000518569 KMT5BQ4FZB7 885 aa7.92□□□□□ -1.14
VPS13B-207ENST00000518569 CFHP08603 1231 aa7.91□□□□□ -1.14
VPS13B-207ENST00000518569 MYSM1Q5VVJ2 828 aa7.91□□□□□ -1.14
VPS13B-207ENST00000518569 TUSC1Q2TAM9 212 aa7.9□□□□□ -1.14
VPS13B-207ENST00000518569 GRIPAP1Q4V328 841 aa7.9□□□□□ -1.14
VPS13B-207ENST00000518569 PCMTD1Q96MG8 357 aaPredicted RBP7.9□□□□□ -1.14
VPS13B-207ENST00000518569 SPTLC1O15269 473 aa7.89□□□□□ -1.15
VPS13B-207ENST00000518569 ACTN4O43707 911 aaKnown RBP7.89□□□□□ -1.15
VPS13B-207ENST00000518569 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
VPS13B-207ENST00000518569 HOXA2O43364 376 aa7.87□□□□□ -1.15
VPS13B-207ENST00000518569 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
VPS13B-207ENST00000518569 RIC3Q7Z5B4 369 aa7.87□□□□□ -1.15
VPS13B-207ENST00000518569 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
VPS13B-207ENST00000518569 FUT2Q10981 343 aa7.86□□□□□ -1.15
VPS13B-207ENST00000518569 RSBN1LQ6PCB5 846 aaPredicted RBP7.86□□□□□ -1.15
VPS13B-207ENST00000518569 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS13B-207ENST00000518569 MTRQ99707 1265 aa7.85□□□□□ -1.15
VPS13B-207ENST00000518569 POLR3EQ9NVU0 708 aa7.85□□□□□ -1.15
VPS13B-207ENST00000518569 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
VPS13B-207ENST00000518569 APLP1P51693 650 aa7.84□□□□□ -1.15
VPS13B-207ENST00000518569 IL21Q9HBE4 155 aa7.84□□□□□ -1.15
VPS13B-207ENST00000518569 FDX1P10109 184 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 NDUFV2P19404 249 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 MORN1Q5T089 497 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 PRPF38BQ5VTL8 546 aaKnown RBP7.83□□□□□ -1.16
VPS13B-207ENST00000518569 Q6ZNB5 142 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 PROCA1Q8NCQ7 364 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-207ENST00000518569 LIMD1Q9UGP4 676 aa7.83□□□□□ -1.16
VPS13B-207ENST00000518569 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
VPS13B-207ENST00000518569 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
VPS13B-207ENST00000518569 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-207ENST00000518569 LILRB3O75022 631 aa7.8□□□□□ -1.16
VPS13B-207ENST00000518569 COPS2P61201 443 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms