RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PTCD2Q8WV60 388 aaKnown RBP9.7□□□□□ -0.86
MRPS28-203ENST00000518371 CD109Q6YHK3 1445 aa9.7□□□□□ -0.86
MRPS28-203ENST00000518371 GLI2P10070 1586 aa9.7□□□□□ -0.86
MRPS28-203ENST00000518371 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
MRPS28-203ENST00000518371 VPS9D1Q9Y2B5 631 aa9.68□□□□□ -0.86
MRPS28-203ENST00000518371 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
MRPS28-203ENST00000518371 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
MRPS28-203ENST00000518371 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
MRPS28-203ENST00000518371 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
MRPS28-203ENST00000518371 GTPBP6O43824 516 aaPredicted RBP9.66□□□□□ -0.86
MRPS28-203ENST00000518371 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
MRPS28-203ENST00000518371 HECW1Q76N89 1606 aa9.65□□□□□ -0.86
MRPS28-203ENST00000518371 THSD4Q6ZMP0 1018 aa9.65□□□□□ -0.86
MRPS28-203ENST00000518371 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
MRPS28-203ENST00000518371 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
MRPS28-203ENST00000518371 Q6ZNB5 142 aa9.64□□□□□ -0.87
MRPS28-203ENST00000518371 MAGI3Q5TCQ9 1506 aa9.63□□□□□ -0.87
MRPS28-203ENST00000518371 FOXK1P85037 733 aa9.63□□□□□ -0.87
MRPS28-203ENST00000518371 DSG2Q14126 1118 aa9.63□□□□□ -0.87
MRPS28-203ENST00000518371 PLPP6Q8IY26 295 aa9.63□□□□□ -0.87
MRPS28-203ENST00000518371 MAP3K4Q9Y6R4 1608 aa9.62□□□□□ -0.87
MRPS28-203ENST00000518371 CCDC18Q5T9S5 1454 aa9.61□□□□□ -0.87
MRPS28-203ENST00000518371 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
MRPS28-203ENST00000518371 KDM6BO15054 1643 aa9.61□□□□□ -0.87
MRPS28-203ENST00000518371 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
MRPS28-203ENST00000518371 PHLDB1Q86UU1 1377 aa9.61□□□□□ -0.87
MRPS28-203ENST00000518371 PCF11O94913 1555 aaKnown RBP9.6□□□□□ -0.87
MRPS28-203ENST00000518371 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-203ENST00000518371 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
MRPS28-203ENST00000518371 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
MRPS28-203ENST00000518371 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
MRPS28-203ENST00000518371 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
MRPS28-203ENST00000518371 COL17A1Q9UMD9 1497 aaPredicted RBP9.59□□□□□ -0.87
MRPS28-203ENST00000518371 TBC1D12O60347 775 aa9.59□□□□□ -0.87
MRPS28-203ENST00000518371 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
MRPS28-203ENST00000518371 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
MRPS28-203ENST00000518371 PPRC1Q5VV67 1664 aaKnown RBP9.58□□□□□ -0.88
MRPS28-203ENST00000518371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.58□□□□□ -0.88
MRPS28-203ENST00000518371 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
MRPS28-203ENST00000518371 RAPGEF3O95398 923 aa9.58□□□□□ -0.88
MRPS28-203ENST00000518371 WNT2BQ93097 391 aa9.58□□□□□ -0.88
MRPS28-203ENST00000518371 CRISPLD2Q9H0B8 497 aa9.58□□□□□ -0.88
MRPS28-203ENST00000518371 PLCH2O75038 1416 aa9.57□□□□□ -0.88
MRPS28-203ENST00000518371 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
MRPS28-203ENST00000518371 NEO1Q92859 1461 aa9.57□□□□□ -0.88
MRPS28-203ENST00000518371 AKNAQ7Z591 1439 aa9.56□□□□□ -0.88
MRPS28-203ENST00000518371 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
MRPS28-203ENST00000518371 FANCAO15360 1455 aa9.56□□□□□ -0.88
MRPS28-203ENST00000518371 ZNF777Q9ULD5 760 aaPredicted RBP9.56□□□□□ -0.88
MRPS28-203ENST00000518371 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
MRPS28-203ENST00000518371 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
MRPS28-203ENST00000518371 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
MRPS28-203ENST00000518371 TTC37Q6PGP7 1564 aa9.54□□□□□ -0.88
MRPS28-203ENST00000518371 KIF14Q15058 1648 aa9.53□□□□□ -0.88
MRPS28-203ENST00000518371 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
MRPS28-203ENST00000518371 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
MRPS28-203ENST00000518371 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
MRPS28-203ENST00000518371 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
MRPS28-203ENST00000518371 DENND4BO75064 1496 aaPredicted RBP9.53□□□□□ -0.88
MRPS28-203ENST00000518371 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
MRPS28-203ENST00000518371 CADPS2Q86UW7 1296 aa9.52□□□□□ -0.89
MRPS28-203ENST00000518371 LRRIQ1Q96JM4 1722 aa9.52□□□□□ -0.89
MRPS28-203ENST00000518371 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
MRPS28-203ENST00000518371 PDE4AP27815 886 aa9.51□□□□□ -0.89
MRPS28-203ENST00000518371 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
MRPS28-203ENST00000518371 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
MRPS28-203ENST00000518371 ADGRL1O94910 1474 aa9.51□□□□□ -0.89
MRPS28-203ENST00000518371 ITGBL1O95965 494 aaPredicted RBP9.5□□□□□ -0.89
MRPS28-203ENST00000518371 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
MRPS28-203ENST00000518371 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
MRPS28-203ENST00000518371 BBXQ8WY36 941 aaPredicted RBP9.5□□□□□ -0.89
MRPS28-203ENST00000518371 UPF1Q92900 1129 aaKnown RBP eCLIP9.5□□□□□ -0.89
MRPS28-203ENST00000518371 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
MRPS28-203ENST00000518371 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
MRPS28-203ENST00000518371 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
MRPS28-203ENST00000518371 GPATCH8Q9UKJ3 1502 aaKnown RBP9.48□□□□□ -0.89
MRPS28-203ENST00000518371 CFAP74Q9C0B2 1584 aa9.48□□□□□ -0.89
MRPS28-203ENST00000518371 MYO5CQ9NQX4 1742 aa9.48□□□□□ -0.89
MRPS28-203ENST00000518371 EHBP1L1Q8N3D4 1523 aa9.47□□□□□ -0.89
MRPS28-203ENST00000518371 PTPREP23469 700 aa9.47□□□□□ -0.89
MRPS28-203ENST00000518371 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
MRPS28-203ENST00000518371 TIAM1Q13009 1591 aa9.46□□□□□ -0.89
MRPS28-203ENST00000518371 LCE2BO14633 110 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 ZNF644Q9H582 1327 aaPredicted RBP9.46□□□□□ -0.9
MRPS28-203ENST00000518371 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 LRRC9Q6ZRR7 1453 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 MAP3K1Q13233 1512 aa9.46□□□□□ -0.9
MRPS28-203ENST00000518371 MFSD10Q14728 455 aa9.45□□□□□ -0.9
MRPS28-203ENST00000518371 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
MRPS28-203ENST00000518371 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
MRPS28-203ENST00000518371 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
MRPS28-203ENST00000518371 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
MRPS28-203ENST00000518371 ZNF518AQ6AHZ1 1483 aa9.43□□□□□ -0.9
MRPS28-203ENST00000518371 MAGI2Q86UL8 1455 aa9.43□□□□□ -0.9
MRPS28-203ENST00000518371 TRAPPC8Q9Y2L5 1435 aa9.43□□□□□ -0.9
MRPS28-203ENST00000518371 FOSBP53539 338 aa9.43□□□□□ -0.9
MRPS28-203ENST00000518371 MLECQ14165 292 aa9.43□□□□□ -0.9
MRPS28-203ENST00000518371 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms