RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
PABPC1-205ENST00000518196 ANKRD30BQ9BXX2 1392 aa18.95■□□□□ 0.62
PABPC1-205ENST00000518196 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
PABPC1-205ENST00000518196 MYO3AQ8NEV4 1616 aa18.94■□□□□ 0.62
PABPC1-205ENST00000518196 STAG3Q9UJ98 1225 aa18.94■□□□□ 0.62
PABPC1-205ENST00000518196 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
PABPC1-205ENST00000518196 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
PABPC1-205ENST00000518196 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
PABPC1-205ENST00000518196 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
PABPC1-205ENST00000518196 CLTCL1P53675 1640 aa18.91■□□□□ 0.62
PABPC1-205ENST00000518196 KIF1BO60333 1816 aa18.9■□□□□ 0.62
PABPC1-205ENST00000518196 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
PABPC1-205ENST00000518196 DSG3P32926 999 aa18.9■□□□□ 0.62
PABPC1-205ENST00000518196 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.62
PABPC1-205ENST00000518196 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
PABPC1-205ENST00000518196 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
PABPC1-205ENST00000518196 KDM5AP29375 1690 aaKnown RBP18.86■□□□□ 0.61
PABPC1-205ENST00000518196 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
PABPC1-205ENST00000518196 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
PABPC1-205ENST00000518196 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
PABPC1-205ENST00000518196 TMEM131LA2VDJ0 1609 aa18.85■□□□□ 0.61
PABPC1-205ENST00000518196 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
PABPC1-205ENST00000518196 ZNF326Q5BKZ1 582 aaKnown RBP18.84■□□□□ 0.61
PABPC1-205ENST00000518196 SIN3AQ96ST3 1273 aa18.83■□□□□ 0.6
PABPC1-205ENST00000518196 LMTK3Q96Q04 1460 aa18.83■□□□□ 0.6
PABPC1-205ENST00000518196 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
PABPC1-205ENST00000518196 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
PABPC1-205ENST00000518196 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
PABPC1-205ENST00000518196 HSPA2P54652 639 aa18.79■□□□□ 0.6
PABPC1-205ENST00000518196 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
PABPC1-205ENST00000518196 NEURL4Q96JN8 1562 aa18.79■□□□□ 0.6
PABPC1-205ENST00000518196 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
PABPC1-205ENST00000518196 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
PABPC1-205ENST00000518196 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
PABPC1-205ENST00000518196 TMEM2Q9UHN6 1383 aa18.78■□□□□ 0.6
PABPC1-205ENST00000518196 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.6
PABPC1-205ENST00000518196 RIMS2Q9UQ26 1411 aa18.76■□□□□ 0.59
PABPC1-205ENST00000518196 SLIT1O75093 1534 aa18.76■□□□□ 0.59
PABPC1-205ENST00000518196 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
PABPC1-205ENST00000518196 ZBTB12Q9Y330 459 aaPredicted RBP18.75■□□□□ 0.59
PABPC1-205ENST00000518196 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
PABPC1-205ENST00000518196 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
PABPC1-205ENST00000518196 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
PABPC1-205ENST00000518196 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-205ENST00000518196 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
PABPC1-205ENST00000518196 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
PABPC1-205ENST00000518196 PPLO60437 1756 aa18.72■□□□□ 0.59
PABPC1-205ENST00000518196 ZFYVE9O95405 1425 aa18.72■□□□□ 0.59
PABPC1-205ENST00000518196 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
PABPC1-205ENST00000518196 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
PABPC1-205ENST00000518196 LTKP29376 864 aa18.71■□□□□ 0.59
PABPC1-205ENST00000518196 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
PABPC1-205ENST00000518196 DCAF11Q8TEB1 546 aa18.71■□□□□ 0.59
PABPC1-205ENST00000518196 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
PABPC1-205ENST00000518196 POLR1AO95602 1720 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-205ENST00000518196 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
PABPC1-205ENST00000518196 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
PABPC1-205ENST00000518196 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
PABPC1-205ENST00000518196 BCANQ96GW7 911 aa18.68■□□□□ 0.58
PABPC1-205ENST00000518196 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
PABPC1-205ENST00000518196 STRCQ7RTU9 1775 aa18.66■□□□□ 0.58
PABPC1-205ENST00000518196 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
PABPC1-205ENST00000518196 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
PABPC1-205ENST00000518196 MED14O60244 1454 aa18.65■□□□□ 0.58
PABPC1-205ENST00000518196 MYOM2P54296 1465 aa18.65■□□□□ 0.58
PABPC1-205ENST00000518196 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
PABPC1-205ENST00000518196 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
PABPC1-205ENST00000518196 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.57
PABPC1-205ENST00000518196 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
PABPC1-205ENST00000518196 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
PABPC1-205ENST00000518196 SLC26A8Q96RN1 970 aa18.57■□□□□ 0.56
PABPC1-205ENST00000518196 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
PABPC1-205ENST00000518196 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
PABPC1-205ENST00000518196 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
PABPC1-205ENST00000518196 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
PABPC1-205ENST00000518196 NRXN3Q9Y4C0 1643 aa18.55■□□□□ 0.56
PABPC1-205ENST00000518196 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
PABPC1-205ENST00000518196 ALKQ9UM73 1620 aa18.54■□□□□ 0.56
PABPC1-205ENST00000518196 LAMC1P11047 1609 aa18.53■□□□□ 0.56
PABPC1-205ENST00000518196 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
PABPC1-205ENST00000518196 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
PABPC1-205ENST00000518196 KIAA1210Q9ULL0 1709 aa18.51■□□□□ 0.55
PABPC1-205ENST00000518196 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
PABPC1-205ENST00000518196 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
PABPC1-205ENST00000518196 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
PABPC1-205ENST00000518196 METP08581 1390 aa18.47■□□□□ 0.55
PABPC1-205ENST00000518196 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
PABPC1-205ENST00000518196 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
PABPC1-205ENST00000518196 KCNA6P17658 529 aa18.46■□□□□ 0.55
PABPC1-205ENST00000518196 TMEM132EQ6IEE7 984 aa18.46■□□□□ 0.55
PABPC1-205ENST00000518196 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
PABPC1-205ENST00000518196 AMOTL2Q9Y2J4 779 aa18.45■□□□□ 0.54
PABPC1-205ENST00000518196 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
PABPC1-205ENST00000518196 STK26Q9P289 416 aa18.43■□□□□ 0.54
PABPC1-205ENST00000518196 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
PABPC1-205ENST00000518196 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
PABPC1-205ENST00000518196 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
PABPC1-205ENST00000518196 PTPRUQ92729 1446 aa18.42■□□□□ 0.54
PABPC1-205ENST00000518196 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
PABPC1-205ENST00000518196 ASXL1Q8IXJ9 1541 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms