RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
SPIDR-204ENST00000517824 C3P01024 1663 aa14.85□□□□□ -0.03
SPIDR-204ENST00000517824 MSH5O43196 834 aa14.85□□□□□ -0.03
SPIDR-204ENST00000517824 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
SPIDR-204ENST00000517824 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
SPIDR-204ENST00000517824 RGL3Q3MIN7 710 aa14.84□□□□□ -0.03
SPIDR-204ENST00000517824 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
SPIDR-204ENST00000517824 LMTK2Q8IWU2 1503 aa14.82□□□□□ -0.04
SPIDR-204ENST00000517824 ESF1Q9H501 851 aaKnown RBP14.82□□□□□ -0.04
SPIDR-204ENST00000517824 PTPRTO14522 1441 aa14.82□□□□□ -0.04
SPIDR-204ENST00000517824 PPLO60437 1756 aa14.79□□□□□ -0.04
SPIDR-204ENST00000517824 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
SPIDR-204ENST00000517824 ZMYM3Q14202 1370 aa14.77□□□□□ -0.04
SPIDR-204ENST00000517824 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
SPIDR-204ENST00000517824 NPATQ14207 1427 aa14.76□□□□□ -0.05
SPIDR-204ENST00000517824 EIF3AQ14152 1382 aaKnown RBP14.76□□□□□ -0.05
SPIDR-204ENST00000517824 GPRASP1Q5JY77 1395 aa14.76□□□□□ -0.05
SPIDR-204ENST00000517824 LTBP4Q8N2S1 1624 aa14.76□□□□□ -0.05
SPIDR-204ENST00000517824 ABCC3O15438 1527 aa14.76□□□□□ -0.05
SPIDR-204ENST00000517824 MYOM2P54296 1465 aa14.76□□□□□ -0.05
SPIDR-204ENST00000517824 C11orf95C9JLR9 678 aaPredicted RBP14.75□□□□□ -0.05
SPIDR-204ENST00000517824 NEFLP07196 543 aa14.74□□□□□ -0.05
SPIDR-204ENST00000517824 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
SPIDR-204ENST00000517824 ADGRB3O60242 1522 aa14.74□□□□□ -0.05
SPIDR-204ENST00000517824 UGGT1Q9NYU2 1555 aa14.73□□□□□ -0.05
SPIDR-204ENST00000517824 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
SPIDR-204ENST00000517824 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
SPIDR-204ENST00000517824 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
SPIDR-204ENST00000517824 NCKAP5LQ9HCH0 1330 aa14.71□□□□□ -0.05
SPIDR-204ENST00000517824 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
SPIDR-204ENST00000517824 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.06
SPIDR-204ENST00000517824 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.06
SPIDR-204ENST00000517824 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
SPIDR-204ENST00000517824 GGT6Q6P531 493 aa14.7□□□□□ -0.06
SPIDR-204ENST00000517824 DISP3Q9P2K9 1392 aa14.7□□□□□ -0.06
SPIDR-204ENST00000517824 SCAF11Q99590 1463 aaKnown RBP14.69□□□□□ -0.06
SPIDR-204ENST00000517824 CLTCQ00610 1675 aaKnown RBP14.69□□□□□ -0.06
SPIDR-204ENST00000517824 TMF1P82094 1093 aa14.69□□□□□ -0.06
SPIDR-204ENST00000517824 PIK3C2BO00750 1634 aa14.69□□□□□ -0.06
SPIDR-204ENST00000517824 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
SPIDR-204ENST00000517824 SYNMO15061 1565 aa14.68□□□□□ -0.06
SPIDR-204ENST00000517824 QRICH2Q9H0J4 1663 aa14.68□□□□□ -0.06
SPIDR-204ENST00000517824 WASHC2CQ9Y4E1 1318 aa14.67□□□□□ -0.06
SPIDR-204ENST00000517824 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
SPIDR-204ENST00000517824 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-204ENST00000517824 SETBP1Q9Y6X0 1596 aa14.66□□□□□ -0.06
SPIDR-204ENST00000517824 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
SPIDR-204ENST00000517824 CDCA8Q53HL2 280 aa14.66□□□□□ -0.06
SPIDR-204ENST00000517824 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
SPIDR-204ENST00000517824 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
SPIDR-204ENST00000517824 MYOM1P52179 1685 aa14.65□□□□□ -0.06
SPIDR-204ENST00000517824 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
SPIDR-204ENST00000517824 CEP170BQ9Y4F5 1589 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-204ENST00000517824 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
SPIDR-204ENST00000517824 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
SPIDR-204ENST00000517824 RALBP1Q15311 655 aa14.62□□□□□ -0.07
SPIDR-204ENST00000517824 NOS1P29475 1434 aa14.61□□□□□ -0.07
SPIDR-204ENST00000517824 SOCS7O14512 581 aa14.61□□□□□ -0.07
SPIDR-204ENST00000517824 ARHGAP31Q2M1Z3 1444 aa14.6□□□□□ -0.07
SPIDR-204ENST00000517824 FBXO31Q5XUX0 539 aaPredicted RBP14.6□□□□□ -0.07
SPIDR-204ENST00000517824 A2ML1A8K2U0 1454 aa14.6□□□□□ -0.07
SPIDR-204ENST00000517824 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
SPIDR-204ENST00000517824 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
SPIDR-204ENST00000517824 NRXN1Q9ULB1 1477 aa14.59□□□□□ -0.07
SPIDR-204ENST00000517824 UBAP1LF5GYI3 381 aa14.59□□□□□ -0.07
SPIDR-204ENST00000517824 TMC1Q8TDI8 760 aa14.59□□□□□ -0.07
SPIDR-204ENST00000517824 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
SPIDR-204ENST00000517824 BRD4O60885 1362 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-204ENST00000517824 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
SPIDR-204ENST00000517824 NEXMIFQ5QGS0 1516 aa14.57□□□□□ -0.08
SPIDR-204ENST00000517824 TNRQ92752 1358 aa14.57□□□□□ -0.08
SPIDR-204ENST00000517824 SUPT16HQ9Y5B9 1047 aaKnown RBP14.56□□□□□ -0.08
SPIDR-204ENST00000517824 ZBED9Q6R2W3 1325 aa14.56□□□□□ -0.08
SPIDR-204ENST00000517824 TESK2Q96S53 571 aa14.55□□□□□ -0.08
SPIDR-204ENST00000517824 PIK3C2GO75747 1445 aa14.55□□□□□ -0.08
SPIDR-204ENST00000517824 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
SPIDR-204ENST00000517824 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
SPIDR-204ENST00000517824 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
SPIDR-204ENST00000517824 ADGRF5Q8IZF2 1346 aa14.52□□□□□ -0.08
SPIDR-204ENST00000517824 FKBP8Q14318 412 aa14.52□□□□□ -0.09
SPIDR-204ENST00000517824 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
SPIDR-204ENST00000517824 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
SPIDR-204ENST00000517824 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
SPIDR-204ENST00000517824 ERVK-7P63135 1459 aa14.51□□□□□ -0.09
SPIDR-204ENST00000517824 CFAP70Q5T0N1 1121 aa14.51□□□□□ -0.09
SPIDR-204ENST00000517824 KNSTRNQ9Y448 316 aa14.51□□□□□ -0.09
SPIDR-204ENST00000517824 PANK3Q9H999 370 aa14.5□□□□□ -0.09
SPIDR-204ENST00000517824 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
SPIDR-204ENST00000517824 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-204ENST00000517824 VGFO15240 615 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-204ENST00000517824 ANKLE2Q86XL3 938 aa14.49□□□□□ -0.09
SPIDR-204ENST00000517824 SBNO2Q9Y2G9 1366 aa14.48□□□□□ -0.09
SPIDR-204ENST00000517824 ADGRB1O14514 1584 aa14.48□□□□□ -0.09
SPIDR-204ENST00000517824 THEMISQ8N1K5 641 aaPredicted RBP14.48□□□□□ -0.09
SPIDR-204ENST00000517824 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
SPIDR-204ENST00000517824 NLRP1Q9C000 1473 aa14.48□□□□□ -0.09
SPIDR-204ENST00000517824 CPS1P31327 1500 aa14.47□□□□□ -0.09
SPIDR-204ENST00000517824 HSPA1LP34931 641 aa14.47□□□□□ -0.09
SPIDR-204ENST00000517824 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
SPIDR-204ENST00000517824 MED14O60244 1454 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms