RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
LINC00535-202ENST00000517785 PDCD7Q8N8D1 485 aaKnown RBP9.55□□□□□ -0.88
LINC00535-202ENST00000517785 ALKQ9UM73 1620 aa9.55□□□□□ -0.88
LINC00535-202ENST00000517785 GOLGA2Q08379 1002 aa9.54□□□□□ -0.88
LINC00535-202ENST00000517785 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
LINC00535-202ENST00000517785 ABCC1P33527 1531 aa9.54□□□□□ -0.88
LINC00535-202ENST00000517785 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-202ENST00000517785 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-202ENST00000517785 SHANK2Q9UPX8 1470 aa9.53□□□□□ -0.88
LINC00535-202ENST00000517785 CPS1P31327 1500 aa9.52□□□□□ -0.88
LINC00535-202ENST00000517785 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
LINC00535-202ENST00000517785 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
LINC00535-202ENST00000517785 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
LINC00535-202ENST00000517785 SETD1AO15047 1707 aaKnown RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 ST18O60284 1047 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 DNMT1P26358 1616 aaKnown RBP9.51□□□□□ -0.89
LINC00535-202ENST00000517785 PREX2Q70Z35 1606 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
LINC00535-202ENST00000517785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC00535-202ENST00000517785 CLIP1P30622 1438 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 GGT6Q6P531 493 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
LINC00535-202ENST00000517785 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 VWDEQ8N2E2 1590 aa9.49□□□□□ -0.89
LINC00535-202ENST00000517785 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
LINC00535-202ENST00000517785 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
LINC00535-202ENST00000517785 L3MBTL3Q96JM7 780 aaPredicted RBP9.48□□□□□ -0.89
LINC00535-202ENST00000517785 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
LINC00535-202ENST00000517785 CDC42BPAQ5VT25 1732 aa9.47□□□□□ -0.89
LINC00535-202ENST00000517785 STRCP1A6NGW2 1772 aa9.47□□□□□ -0.89
LINC00535-202ENST00000517785 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.89
LINC00535-202ENST00000517785 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
LINC00535-202ENST00000517785 SPAG9O60271 1321 aaKnown RBP9.46□□□□□ -0.9
LINC00535-202ENST00000517785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00535-202ENST00000517785 FMN1Q68DA7 1419 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 ATP7AQ04656 1500 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
LINC00535-202ENST00000517785 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
LINC00535-202ENST00000517785 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00535-202ENST00000517785 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
LINC00535-202ENST00000517785 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 A2MP01023 1474 aa9.44□□□□□ -0.9
LINC00535-202ENST00000517785 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
LINC00535-202ENST00000517785 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
LINC00535-202ENST00000517785 SNPHO15079 494 aa9.43□□□□□ -0.9
LINC00535-202ENST00000517785 INO80Q9ULG1 1556 aaPredicted RBP9.42□□□□□ -0.9
LINC00535-202ENST00000517785 ARHGAP35Q9NRY4 1499 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 TNRQ92752 1358 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
LINC00535-202ENST00000517785 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
LINC00535-202ENST00000517785 SYNMO15061 1565 aa9.4□□□□□ -0.9
LINC00535-202ENST00000517785 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
LINC00535-202ENST00000517785 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
LINC00535-202ENST00000517785 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 EEA1Q15075 1411 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
LINC00535-202ENST00000517785 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
LINC00535-202ENST00000517785 FAM135AQ9P2D6 1515 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 MED14O60244 1454 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 SRCAPQ6ZRS2 3230 aa9.37□□□□□ -0.91
LINC00535-202ENST00000517785 PZPP20742 1482 aa9.36□□□□□ -0.91
LINC00535-202ENST00000517785 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
LINC00535-202ENST00000517785 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
LINC00535-202ENST00000517785 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
LINC00535-202ENST00000517785 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
LINC00535-202ENST00000517785 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC00535-202ENST00000517785 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 KIF3BO15066 747 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 TRIM52Q96A61 297 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 ZC3H13Q5T200 1668 aaKnown RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 CFAP65Q6ZU64 1925 aaKnown RBP9.34□□□□□ -0.91
LINC00535-202ENST00000517785 KDM5DQ9BY66 1539 aa9.34□□□□□ -0.91
LINC00535-202ENST00000517785 ROBO1Q9Y6N7 1651 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 G3V3G9 751 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 RIOK3O14730 519 aaKnown RBP9.33□□□□□ -0.92
LINC00535-202ENST00000517785 CFDP1Q9UEE9 299 aaPredicted RBP9.33□□□□□ -0.92
LINC00535-202ENST00000517785 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
LINC00535-202ENST00000517785 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
LINC00535-202ENST00000517785 PLEKHH2Q8IVE3 1493 aa9.32□□□□□ -0.92
LINC00535-202ENST00000517785 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
LINC00535-202ENST00000517785 CASKIN1Q8WXD9 1431 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
LINC00535-202ENST00000517785 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
LINC00535-202ENST00000517785 DHX29Q7Z478 1369 aaKnown RBP9.3□□□□□ -0.92
LINC00535-202ENST00000517785 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
LINC00535-202ENST00000517785 PHLPP1O60346 1717 aa9.29□□□□□ -0.92
LINC00535-202ENST00000517785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
LINC00535-202ENST00000517785 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
LINC00535-202ENST00000517785 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
LINC00535-202ENST00000517785 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
LINC00535-202ENST00000517785 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms